Array 1 4374-6192 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZVX01000025.1 Candidatus Kryptonium thompsoni strain JGI-11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 4374 30 100.0 36 .............................. TAAATAATCAACTTCCCCACCAAAGACACAAAGAAC 4440 30 100.0 36 .............................. GCTCTCTCAAAATCTTGTTTAAATCTTCTCGTTCTT 4506 30 100.0 36 .............................. CTTTTCATTTTGCATTTTCATTCTCCTTTTGATTTA 4572 30 100.0 36 .............................. AGTGGGGTCAATCAAAAGCCAAACATCTTCCTCATT 4638 30 100.0 36 .............................. CCATTTCAACCATCAGCATAATTCTTTCTGCAATCT 4704 30 100.0 36 .............................. TGGAAATAGGTTTTCTGAAACCCCTATTCCGAATAT 4770 30 100.0 36 .............................. TTTTTTTGATTTTTTTAAAAAATCGCAAAAACAACG 4836 30 100.0 36 .............................. ATGCTTTGGAATAAAAAATGCCCACTATCTTTACCG 4902 30 100.0 36 .............................. CAAATTTGGGTTTTAATCGCTCTTTCAAAAATTCTT 4968 30 100.0 36 .............................. AAGTTTTCAATTACAATTTTTCGGTTGCTCTCAAGT 5034 30 100.0 36 .............................. AAACAATTATCGCAAGTATAAGTTTTCTATATCCTT 5100 30 100.0 36 .............................. TTTTTGATTTTGCATTTTCATTCTCTTTTTTGATTT 5166 30 100.0 36 .............................. TCCTTATCACTTATGTAAGCAAGATAATCACATTTA 5232 30 100.0 36 .............................. ATATAGGCTTTGGGATAAGTTGTTTTTAAATAATTT 5298 30 100.0 37 .............................. CGTTTTTCTTTCCTTATCCAATCCGCTTCATTTTTGA 5365 30 100.0 36 .............................. ATTGTCCAATTTGCAGTAAGAGAGAAAAATTCCATA 5431 30 100.0 36 .............................. AAGTTTCAGCGTCGAAATACCCTGCAAGCGCGATTC 5497 30 100.0 36 .............................. ACCCTCTGGACAAGCGACATTCTGCAGGCATTTTGC 5563 30 100.0 36 .............................. ATTATTTTGTAGAGTATAGGTCTATTAGTTTTTCCT 5629 30 100.0 36 .............................. TTCTTCTTTTGTCTTAGTATAACTGGTTGGATCAGT 5695 30 100.0 36 .............................. AAGGTAGATATAAGCAAGATGTATTTTTTAGTTGCT 5761 30 100.0 37 .............................. ACTTATCAAATAAATAATAATTCTCACCATCAAAATA 5828 30 100.0 37 .............................. TTATAAAATAAAATTGAATTTTCCCCTGTTTGAATAA 5895 30 100.0 37 .............................. GAAATAAAAAAGATTCCCTTCGTATTCATACACTTTG 5962 30 100.0 37 .............................. TCTCATTTCGCAGGATCACATACAAAGGGTCAAAAAT 6029 30 100.0 36 .............................. GTTCATGAATATCGCGATCGTATCGATTGCGCTTTC 6095 30 100.0 36 .............................. TAGTTCAGAAACGCCATTTCCTCAACCAGCGTGTCA 6161 30 96.7 0 .............................T | TT [6184] ========== ====== ====== ====== ============================== ===================================== ================== 28 30 99.9 36 GTGAGCATCGAACCAGTGTGGAATTTAAAC # Left flank : ACATATAATGGGAGAGGAAAAATATGAAGGATTTAAAATTTGGTGGTAGGGGGGCTAGAAATGTATTACATAGTTGTTTATGACATAGCGGAAAAGAGGGTGAACAAAGTTTTAAAATTTATGCGAAAGTATTTGAATTGGGTGCAAAATTCGGTATTTGAAGGAGAATTAAGCGATGGACAATTTGAGGAAATGAAAGTAAAATTGAGAAAAATAATAAACTTGAATGAGGATTCGGTTTTAATTTATTCAATGGAGAAAAAATGGGTTGATAGGGAAGTTATAGGTGTGGAAAGAAGTGAGGTAAGTAGAATAATTTAGTCGCGGACAGAGTTTTGGGGCGTTAAATTTAGCGGTTAAATACTTAATATTTGAAAGTTTGAAAAAAATTAATCAGTTTTCTCTTAGTCGCGGACCGTATATTTTTGCATTTTGCTCCGCGACTTAATTTAGGTTGGAAAAATTTGATTTTTTGTGTAAAATTTTGTAGTTTTTGGAGA # Right flank : TCACTTTATCAGAAGGGAAGTATTTTTATGATCAAGACCAAGCGTGTTTATGAGGCCCCTGAACCTGATGACGGTAAGCGTTTCCTGGTGGAGAGATTATGGCCCAGGGGTGTGAAGAAAGAAACTTTGCAAATTGACGCATGGTTGAAAGGAGTAGCTCCAAGCCACAGCTTGCGACTTTGGTATGGGCATGACCCAAAGAAATGGGAAGAATTTAAACGACGCTACTTTGCTGAGTTAGATGGCAAACCCGAGGCATGGCAACCCATCTTAACAGAGGCCCGCAAAGGAAATGTAACCCTTCTGTATAGTGCACGCGATACGGAACATAATAGTGCGGTAGCATTAAAGATTTACTTGGAGAATAAAAAATGATGGGATAACTTCGAAAAAGTTTTCAGAAACCTGCTATTGACTCTAAGCCCAATTTTCGTTAAATTTAAGATAAACATAGCGGAAAATAGTTAAGAAATTTAAACTAAAATTGAGGTTCCACTATG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCATCGAACCAGTGTGGAATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 15822-25031 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZVX01000013.1 Candidatus Kryptonium thompsoni strain JGI-11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 15822 30 100.0 38 .............................. ATGATAACTTCTCTGAAGCACCGTGTTTAAATCTTCTT 15890 30 100.0 35 .............................. AAACTGGGACCTGCATAATGTTCGCATTTATTTAT 15955 30 100.0 37 .............................. TAAATTTTTGGATACCCCCCCTCCATTTGAGAGAGTA 16022 30 100.0 37 .............................. ACTATGTTCTTTTGAAACTCAAAATCTAAAAGAGAAA 16089 30 100.0 36 .............................. TAAATAATTTTGATGAGATGTTCAGGGAGCAATTTA 16155 30 100.0 36 .............................. GAAACTAATTGTTCGCGCTTAATGGGGTCTACTTCC 16221 30 100.0 37 .............................. ATATCTCCTCTGCCCACCAACTTGATTAAAACACGGG 16288 30 100.0 36 .............................. ATTGTTTGTGTTAAAGTTTTATCAATCCTTTCTTTT 16354 30 100.0 35 .............................. TTCCAGACAACCGCACCTTTTCATCAAGGCGTTTA 16419 30 100.0 36 .............................. GTTTATAGGGATTATCAAAAACCCTCGCTGGGATAT 16485 30 100.0 38 .............................. TTAAAACCCTTTTATGTCTTCGCAAGAAATAATAAACT 16553 30 100.0 37 .............................. ATAAAAAAGATTATTGACCCGTTTTTAAATTCAACAT 16620 30 100.0 38 .............................. TTGAGGGCTACATCATAGCCCTGCGACCCAATAATAGT 16688 30 100.0 34 .............................. CAAGAAATAATAAACTTATTTGTACAACTTACGT 16752 30 100.0 37 .............................. ACGATTATAAGCCAAAAGTGCTAAATCGGGATTTTGA 16819 30 100.0 37 .............................. AAGTATTTGTCGCAGGGTCATACGCCTCATTCGTGGA 16886 30 100.0 37 .............................. ATAAATTATTTTATCCCAATATCTTCTTTCAATTTCA 16953 30 100.0 37 .............................. TTTACGCCGAATGACCTCAAAATTCTCTGAAGTTCTT 17020 30 100.0 39 .............................. ACGGGCATTGATTCAAATGGGGAAAGATCCCGCAAATTA 17089 30 100.0 35 .............................. TCGCTTGCAATAGCGGGGATTAACAAATCTTCTAT 17154 30 100.0 38 .............................. TCCAATAATGTTTAGCCCCCCACTCTTCTTCTCGTCCT 17222 30 100.0 37 .............................. GAAATTAATTGTTCACGCTTAATTGGGTCTACTTCCA 17289 30 100.0 37 .............................. GTAAAAACAATTGCTTCCCCAAATTCTTCTTTTGCTT 17356 30 100.0 39 .............................. CCTATCATGCCCTAAAATATATCCGCCACTTGTCGTTCT 17425 30 100.0 36 .............................. CGGGGCAAAATCAGCAATTGGAGCGAATTTTAACAC 17491 30 100.0 38 .............................. TGAAGTCGTTTGACAGCATTTAAAATCTCCTCATCAAT 17559 30 100.0 35 .............................. TTGGGAATGAAATAAAAAAGTGTATTGCTCACACC 17624 30 100.0 36 .............................. AAAAATATTCTAACTTCTTCACCCCTTACAAGTTTT 17690 30 100.0 36 .............................. TTTCATTTATAATCTCATCATTCTTAAATGGCTTTT 17756 30 100.0 36 .............................. GGATAAACCGCCCGTGGATGTGTGGGAGCAAATTAT 17822 30 100.0 36 .............................. TTATTTGTTTTTGAAAGGGACAATTTACAAGCATTA 17888 30 100.0 37 .............................. ACCTTTGCGATGACCAATTTATCCTTTACCCTCGCAA 17955 30 100.0 37 .............................. TTTAAGATTGCTTCTCAATGGGAGCAAAATTTATTTT 18022 30 100.0 35 .............................. AATTTGAAGAATTGCAAAATGAATATGAGCAACTC 18087 30 100.0 35 .............................. GCTGTTAAGTAGGGACGCCCCCCATAATTTACAAA 18152 30 100.0 35 .............................. AATTTATTTGCCTCCTGCTCAGCTTTCCGATTTAT 18217 30 100.0 37 .............................. TGGGGAAATTAAATCCGAAAGAAACGAAAGAAATCCT 18284 30 100.0 34 .............................. ATTTAGACTTTTGGGGAACAAATAAAACGACATT 18348 30 100.0 37 .............................. ATAAGTTGATTGATTTATTTGACAATAACATTGAATA 18415 30 100.0 36 .............................. TATAGTTTGGAACATAACTACCCGCTTTATTGAGAG 18481 30 100.0 36 .............................. TTAGCATTAATATAATTTTCCAGTGTAATTCTGGAA 18547 30 100.0 37 .............................. TTTCGGAAATAATTTCCTTTAATTGCTGATCAATTTC 18614 30 100.0 37 .............................. TTTTTAAATGATTTAAAACTTGTTCTTTTAAAAATTC 18681 30 100.0 37 .............................. TGACAAATAAAACAAATAGAATTATATTAGTAGTGAA 18748 30 100.0 37 .............................. GCTGTTGTTTGGTGAGTTCTTCTTGTTCGCGCCCCGC 18815 30 100.0 37 .............................. AAAAATTTTTATGGCTATGGGATAAAATATCTGCTTG 18882 30 100.0 35 .............................. TTAAAAGATTTTTAAGAAAATCTCTTAATTTTTTC 18947 30 100.0 35 .............................. AGATTTTTTACTCCAATGCCAAAGGGAGCAACAAA 19012 30 100.0 36 .............................. ATGGGAAATTTATGGATTATTTAAGTTTTGATTTTT 19078 30 100.0 36 .............................. AATGAATTTTCAATTGTTTGTGTTAAAGTTTTATCA 19144 30 100.0 37 .............................. TAAATTAATTTTACAATATGCTCCGGTAAAAGCCTAT 19211 30 100.0 36 .............................. AAGCTATTCACCCCAATGGCGCCCGGTTTTACCTAA 19277 30 100.0 37 .............................. TTACAAACCGCAAATTTCGGCGATATCCTCCTCATTA 19344 30 100.0 36 .............................. TCCTGCTACGTAAAAATACTTTCTCATTTTGCCTCC 19410 30 100.0 36 .............................. ATATCAAGGATATCAACCCTCCGCCCATCCTTCTTT 19476 30 100.0 35 .............................. ACTGAAAATCTCGCTCGGAAAATTCTCACCGAAAA 19541 30 100.0 38 .............................. ATTAGCTTGAGGGAGTTGTTGCAATGAATTTCTTAAAT 19609 30 100.0 36 .............................. TCTTTAAAACTAACAAGCAAATTTTTACCATATTTT 19675 30 100.0 37 .............................. CTTTTGAAGTTGCTAAATTATTGGCGTGGAACGACGA 19742 30 100.0 35 .............................. TCTCTTGACAAATTGCGTTGAAGTTATTATATTTA 19807 30 100.0 36 .............................. CTACAAATATAACAAATTTTATCTTGCTTGTCAAGA 19873 30 100.0 36 .............................. AAAATTAAATCTCTGCTTACCAAAAATAAACCAAAT 19939 30 100.0 35 .............................. TTTGGTTAATCGGAAAGAGCAAGAAAGGAGAATTT 20004 30 100.0 37 .............................. TTCAGCAATCTCTTTCATCTCATCCGTCACTCTTTTA 20071 30 100.0 35 .............................. CTGAATTTCAATCATCTGATCGGTTAATTGCCTTA 20136 30 100.0 36 .............................. GGAGGCAAGCGATTATACTTTTAAAGCTGATGTAAT 20202 30 100.0 36 .............................. TTTAAATCTTCCTGAAACTTTAGCGCCTGAACCTTG 20268 30 100.0 36 .............................. TATAAATTAACCCCAATTTTCTCAAGTTCAAGCTTT 20334 30 100.0 36 .............................. TTATGCATAACACGTTCTCCACAATCACAGTGACCC 20400 30 100.0 37 .............................. GAACCTTTTAAAAACAATAAGTCACCGAGACGATTAT 20467 30 100.0 37 .............................. AATTCTTTTGGAACAAAATAAAAAAGTGTATTGTGCA 20534 30 100.0 37 .............................. ACGCAATTTGTCAAGAGGCAAAAATAAAAGTGTGATT 20601 30 100.0 36 .............................. TCCTGAAACTTTAGCGCCTGAACCTTCGCCTCATCT 20667 30 100.0 37 .............................. AAGATTTGCTTGATGATTTAACTTATCAACTATTGGA 20734 30 100.0 37 .............................. GAGATAGCGCCCCTGTGAATCTTTGAGTTTTCTTAAC 20801 30 100.0 37 .............................. GAAAGTTGAGCGACAAGTTTTATAATTCTGGGTATAA 20868 30 100.0 34 .............................. TAATATATCGTTCCACTTGCAATCCTTACGCCCG 20932 30 100.0 38 .............................. TGAACTCTTCTTTCCCCATTTCATCAGCCCGTAGCTTC 21000 30 100.0 37 .............................. ATAAGAGCATACCATATATTCTTATCGCTCAAATTCA 21067 30 100.0 36 .............................. TATTTAACATACGCTAATGCAAATGACAACATCCGA 21133 30 100.0 38 .............................. TATGTATATCCGCAATTCCAACACCCATGCAATTCCCT 21201 30 100.0 35 .............................. ATTTTTAGTTTTCAAAATACTTTTTATCCTTTAAA 21266 30 100.0 37 .............................. AATGAGACATTAATTTATAAAAGAACTCGTAGCGCGT 21333 30 100.0 35 .............................. TTTTAATTCCCTTCTGCGACCATAAATACCCCTTT 21398 30 100.0 37 .............................. CATACAATTTTAAAATCAAGAAAATTAAAAATCAAGT 21465 30 100.0 36 .............................. ATCACTTTTGAATTTGTAAATTTTACACACAATTAT 21531 30 100.0 37 .............................. CCATTAAAGATATAATAATGTGCGTTGGGGCTTCCAT 21598 30 100.0 35 .............................. GAAGAAGATTTAGAAAAGGTTGTGACCGTTAGGAC 21663 30 100.0 37 .............................. CAAGGTCCATTTTAACCCCCATTACTTTTTTTGTTTT 21730 30 100.0 38 .............................. TTAATATTAATAATTTCAACCAAAACATGCGCGTAATT 21798 30 100.0 36 .............................. TCGTTAAAAGGGAGTTTATATCCGTCAACACGCCAC 21864 30 100.0 35 .............................. TCCCTATTCGAATAACTCGTCCGGGGCGCGCAAAA 21929 30 100.0 37 .............................. AAAAACAGGAGTGTGATTTATATCACACTGTTTTTAA 21996 30 100.0 37 .............................. TTCTTTTAATTGCCTCGGTAATGCTTATTGTTTTAAT 22063 30 100.0 37 .............................. ATTTTAAGTTCGCACACTCACGATTCAATTTATTATC 22130 30 100.0 37 .............................. TTATGCATAACACGTTCTCCACAATCACAGTGACCCA 22197 30 100.0 37 .............................. TTAAAAGGTGGTTTATATCCGTCAATATACCACCTGT 22264 30 100.0 35 .............................. ATTCTCTCCCCAAACAAATTGTGGGGGTTTACAAC 22329 30 100.0 37 .............................. ATAAATTTTATCAATTCCAACCCATTTATCCCGTTCA 22396 30 100.0 37 .............................. AGAGATGAATTAAATTTTATGGTTATTTCCGTTATTT 22463 30 100.0 38 .............................. GCAATTAATGATAGATATGTTTCATTTAGCTGGACTTG 22531 30 100.0 36 .............................. ACAACTATATAACTTGAACAAACAAGTTTATTATTT 22597 30 100.0 37 .............................. ATAAGAGCATACCATATATTCTTATCGCTCAAATTCA 22664 30 100.0 36 .............................. TATTTAACATACGCTAATGCAAATGACAACATCCGA 22730 30 100.0 38 .............................. TATGTATATCCGCAATTCCAACACCCATGCAATTCCCT 22798 30 100.0 35 .............................. ATTTTTAGTTTTCAAAATACTTTTTATCCTTTAAA 22863 30 100.0 38 .............................. TTCGATATTGTCAACTCTATCAGACAAATTTTTTATCA 22931 30 100.0 37 .............................. GCACCAATACCCATCCTTTCTCTTTCGGCGGCTTCAC 22998 30 100.0 37 .............................. TTTTGTAATTCCGTATAACTCATATCCTTTCTCTATT 23065 30 100.0 38 .............................. ATGTTTGAATTTATGCAATTTTATTTATGATTTGGAAA 23133 30 100.0 37 .............................. TTGAAAGGGGTTCTATAATTGCGATTAAATTGTAAAA 23200 30 100.0 37 .............................. ATGAGAACAAGCACTGGAAATTCCTTAACATAAATCT 23267 30 100.0 36 .............................. TCATTTTTTCCTCCATTGTTTTGTTTTTGAATTTAA 23333 30 100.0 36 .............................. AAGAGAGACAAAGAAGGGGACTGACGGGATCCCAGA 23399 30 100.0 38 .............................. AGCATAAACGAGCGCCTTGATCCACTCCTCGCCCCTGA 23467 30 100.0 36 .............................. AATATGAACAGCCAAAACAACATGCGGAGGTGAAGG 23533 30 100.0 37 .............................. ATAAGAGCATACCATATATTCTTATCGCTCAAATTCA 23600 30 100.0 38 .............................. GGTGAAATACCGCCTGAAGCTTCACGACAACAGGCTCG 23668 30 100.0 36 .............................. TAAAATTCTCTTCGCTTCATTTTCGCTTATTTCTAC 23734 30 100.0 38 .............................. ATTTTTCCCCGGTTGCTATGAACCGGGTTGATTTTTTA 23802 30 96.7 38 ........T..................... TTGTTTTAACCACCGTTTTATTTTAAACAAATCCTTAT 23870 30 100.0 35 .............................. TGGGACAACAGGATCGGCGTCAAGCTGACGAATTC 23935 30 100.0 37 .............................. GTTGGTTTGCGATTCTGACGGAAGCGAAATCGATAGT 24002 30 100.0 37 .............................. ACTACAGCCTTGTGCCGGGAGACATTGTCGAAATCGA 24069 30 100.0 34 .............................. TAGATTTTCTTATATTTTACTGCTCCACCAATTA 24133 30 100.0 38 .............................. TAAATTCGCAATTATATGCAACACCATTGGAAATAAAT 24201 30 100.0 37 .............................. CAAATAAATAATCATTCTTCTTCACAACATTGTTAAA 24268 30 100.0 35 .............................. ACCCTCAAGAGCCAGTTCTTTTGTCATTTTAACCA 24333 30 100.0 36 .............................. TATATCTTGCCAAAGCGGTATCTATATTACTTTCAT 24399 30 100.0 37 .............................. AATATTCTACACTGCCACATTTTTCACACCTAACTTC 24466 30 100.0 35 .............................. TTCTTAGCTAACTCTTATCTTGATTCTGTTATTCA 24531 30 100.0 37 .............................. ACACATTATTCCGCCGACGCCGAACGCAAATGTTTGG 24598 30 100.0 37 .............................. CCCTTGATAGGGAAAAATTGGACTGCGTCATTTAATC 24665 30 100.0 38 .............................. ATTTTTCCCCGGTTGCTATGAACCGGGTTGATTTTTTA 24733 30 96.7 38 ........T..................... TTGTTTTAACCACCGTTTTATTTTAAACAAATCCTTAT 24801 30 100.0 36 .............................. GTTTTTAGAAAGGTTTTGGGTTAGCATTATTATGTC 24867 30 100.0 37 .............................. ATTAAGTATTTCAATTGCTTCAGTCTTACATTAACAA 24934 30 100.0 37 .............................. CTATGATATACAAAAACAACAACTTTACTCTCATTTT 25001 30 86.7 0 ........T..................TTA | A [25026] ========== ====== ====== ====== ============================== ======================================= ================== 139 30 99.9 37 GTTTGAATCGAACCTGTGAGGGATTGAAAC # Left flank : AAGTTTGCAAATTATTGCGTAGATATTTACACTGGGTTCAAAATTCTGTTTTTGAGGGCGAGTTAAGTGAGGGGAAATTGGCTGAGTTGAAGTTCAAACTTTCTCAGATAATAGATCCTGAGGTTGATTCTGTGATAATTTACACTTTGTGGGGTAAGTGGAAGGGCAGGGAGGTTATAGGGTTAAATAAGAATCCAGTTGATAGTTTAATTTAGTTTTAGCTATGGGGTTGACCTTGGGTCAACCCTTTTTTATTTTTTTATAATATTCGTTATTACATTTCCGAGAATCGCGTGAAGAAGTTAGCACATTAATTTTTGAATAATTTATTGATTTACAATCAAAAAGTCGCACTCTGACATAAACTAAGACATTTTGTCAGGGAGGTTGGCGGAAAAATTTGGGGTATGGGTTAACATTTAGGCTCTTGACTTTTGGTGGAAAATTTATTATATTATAGTGTCTGAATTTTGATAGGTTTAAGTTTTATTTTATGGTGG # Right flank : AGGGTAATTTGTGAATTGAATTGGTGAGGGGGGGTTAAAGCATATAGTTTGTGGAAAGCTTTTAATGTTATGGTGAGTAAAAGGGTAAAAAGGTCAGAAAAATTTTTGATAATGTGCATGTAAAGTCAGTTTAAGAAATTTTGTAAGCCGGGTAATTTCAGAGAGTGTAGCTCTTGACTTTTATTTAATTTATTGATATAATTAGCACAGAGAGGAGCCTCCAAAATACTAAGGTGGATTTAAAATGGAATTAAAGTTAAAGTGCAAAACCATAACACCAATGTTTATGGCGGGGGCTGATGGTAAAACTCCTGAGTTAAGGTCTTCAGAGTTTAAGGGGATGATGAGGTGGTGGTGGAGGGCAATAAAGGCGGATGATGATATTGGAAAGTTGAGAAAAGAGGAAGCGGAAATTTTTGGAGGGACTGGGGAAGGAGAGGGCAAAAGCAAGGTGAGGGTGATAGTAAAGCCAGGCTCAATTGACATAGGCAATGATGTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATCGAACCTGTGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 34227-34788 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZVX01000013.1 Candidatus Kryptonium thompsoni strain JGI-11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 34227 30 100.0 37 .............................. GATTTAGACAGCTTTCAACAAGATTATTTTCATTTGC 34294 30 100.0 36 .............................. CGGCTAATCGGGGATACATAGAAATACCAATACTCC 34360 30 100.0 36 .............................. TGGGAAATTTCGGTTAAAGCAAGATGGAATGGGCTG 34426 30 100.0 36 .............................. GATACGACAACATCTTCAAGGTTGCGAGCGAGCTTC 34492 30 96.7 37 T............................. AGTATTTCAATTCGTTCCTCCTTGCTTAAAGTAACAC 34559 30 100.0 38 .............................. TTCATTTTAGCCTCCATGATTTTTTTGTTTTTTTATTT 34627 30 100.0 37 .............................. ATAATAAAGAAATCTGACAGTATCCATAGCAAAACTC 34694 30 100.0 35 .............................. ATCTCTTCAACGCTCAATATTTTACCCTCTGGCGG 34759 30 93.3 0 .........................A...T | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 98.9 37 GTTTGAATTGAACCTGTGAGGGATTGAAAC # Left flank : CCTGATTATTATTCTGGGAAGCAACCTCCGGCGGATTGGCAGAATCCAAATCCTATAAAATTTTTGACTGTTGAGAAGACGCATTTTCAATTTTATTTGATTTCGCAGGATAGTTCTTTACTTCAGAAGTCGGAGGTGTTATTAAAGGAGGCGTTAGGGAAGTTTGGGATTGGGGCGAAGACATCTTTGGGGTATGGGATATTTGAGATTTAGGGGGAGATGCGTTAGGTGTTCAATTTTGTTTTGTGGGTTGAGGGGTTGTTTTATATTCGTTATTTCGTTTCCGAGAATCGCGTGAAGAAGTTAGCACATTGATTTTTGAATAATTTATTGATTTACAATCAAAAAGTCGCACTCTGACATAAACTAAGACATTTTGTCAGGGAGGTTGGCGGAAAAATTTGGGGTATGGGTTAACATTTAGGCTCTTGACTTTTGGTGGAAAATTTATTATATTATAGTGTCTGAATCTTGGTAGGTTTAAGTTTTATTTTATGGTG # Right flank : TGAAATTCTTGCTGTAAAATTATTTCAAAAAACACAAAATTCATTGCCTAAAAACTTATTTCACAGCAACTGTAAATGTTTTGCGTTAAGTTAAAATCATAGGAGAGGGGTTAAAATGTTAAGGAATTTATTTTTAGTTTTAATTTTTAATTCTTTAATTTTTTGTGAAAAGTTATTTTCACAGCTATCGTTTACAGGTGTTTCTGATCCTTGGATCAAGGGGAGGGTTTATCTTTTTGATGGGCATCAAAATTATGGGAGAAGAAGTTGGGCTTTGGCAGGTGGCTTAGGTAATTTAAATGTTAAGAGGGATAGGTATAATTTATTAGATTTAAGGTCTTTCGGGTTAAAAGATTCAGTTAGGGGAATTGGTAAAAGAGTAAGGGTTGGGGGAAGCGTCGGCATCATGGGTTTATTTCCCATCTTGCTTTTTCGCTCTGATATAAAATTTGGAGGGGTTCCTGTAACAAATTTTCAAGTAGAAATTGGGTTTAAAATCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATTGAACCTGTGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //