Array 1 195396-194422 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL834310.1 [Clostridium] symbiosum WAL-14163 supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 195395 33 100.0 34 ................................. TTTCAATTTTTCTATTCTATTCATTTTCCACCTC 195328 33 100.0 34 ................................. TTGCGGAGGAGAAGAGTATCTCCCGCGCATCTGC 195261 33 100.0 34 ................................. CCCTATATTCGACCGATATCGTTCCGGTTCCCGT 195194 33 100.0 35 ................................. TTGCCAGTACGCAGGCTACTGCTGACGATGTCCCT 195126 33 100.0 36 ................................. TATCTCCTGATATGAAAGAACTGATGGCACGCAGCC 195057 33 100.0 33 ................................. CCCGGTATCGATCAACTCGCATTTTGTAGAAGT 194991 33 100.0 33 ................................. CTGGCGCTGCCAAGCCTTCAGCCACACCGAAAA 194925 33 100.0 34 ................................. ACTACCAAAGTTATGACTGCCATCATCGCCCTTG 194858 33 100.0 34 ................................. ATACACTTCCGCGCCAGATATATCGTGTTTTCCG 194791 33 100.0 35 ................................. AAAATCAACCGATTTTCGGCCTTCCAGCTCACACT 194723 33 100.0 35 ................................. TAGCGTCTCCCCATACCACTTCGCCCGGTATTCTT 194655 33 100.0 35 ................................. TCGGATACAGGGGTTACAAAGCTGTCAAGCATGCC 194587 33 97.0 33 .........T....................... CTTGAAGTTATGCAGGGCAAGTGGGAGGGCGTA 194521 33 100.0 34 ................................. AAAGAGGTTAACGCCTGCTCGTGTACCTTCTGCT 194454 33 84.8 0 ......T.......T.........A...T..G. | ========== ====== ====== ====== ================================= ==================================== ================== 15 33 98.8 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : TTGCTGGAATTGTTCCAATGGAAATCAAGTGAGGAAGCGGTAGAAAATAATCTGGATAGAATGAAGGATGAAATTGCTGATATCTTTATATATCTGCTTATGCTTTCGGATGATTTGGGGTTAGATCTCTTCAGTGCGGTTACTGAAAAAATGAATAAAAACAACGGAAAATATCCAAAAGAGTTATGCAAGGGGAAGCGTGATAAGTATACAGCCTATTTAGAGTGAAAATTAAACATAATATTTCATTATTACATTGCTTGTTTGAAAACTGTAGGGTTAACTATGGGTTGATTTAATGGGTATTGATCTTTAGTAAGAAGAACCAAGTGCGAATAGTAGTTGTACATAAAATCCCAGGGAGATTCGCACTACAATTGGCCGGAAAATACTATTAAATTACGCGAGGAAATTTCAACTTGATAAACGATTTGTAGAAGATGTATAATATGAAGCATGTAAATGTGGCATAGATGCAAGAATAATTGTGCATTTTTGCC # Right flank : TTTACAGGTGGAATATACTTTTTTATAGACCTTGTAAATAAAATCGCTTAATTTAGATATGCTTCACTTAGTCTGTTCGCTGACGCTATCAAAGCCATATCAATTCCCCCTCCAAAACTAATTCAAAATAATGATTGACTTTTTAAACTGTAACAATTATACTTACAGTAAAGAGAGCAGAACATACATTTCCCAATAATAATATAACTAACACATAAAGAAGTATCAGAACCCACTTATCCATCAATAATATATACATCATTTAAAGGGAAATCCCATCTAATAATTGCAATACCACATTATTTATGAAGATAGATAATCGAAGGCCATAATAAAGATATGCTCAGGAAAGAAGGTATATAAAAATGGTAGTAAACTTAAAATCCAACACAGAACCTAATCCGAAACCAGACGATAGCCAAAACTCGGAGATAAGCAAAAATACGAATAATGATATCATACCCACTCAAAAAACTAACATAGAAAACACGACAAAACTC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 196514-196143 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL834310.1 [Clostridium] symbiosum WAL-14163 supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 196513 33 100.0 34 ................................. AAAAAATTGACCTGTATCAGCAAAGACAACTTCG 196446 33 100.0 36 ................................. ACCACTCTTCCGACCAGGCCAGTATCGGGCGTCCTG 196377 33 100.0 34 ................................. AAGTTTGATGCACGGGGACGATTAACACGGGTGG 196310 33 100.0 34 ................................. GGATGGCAGGAATGGATGAGCAAAGCATCCGATA 196243 33 100.0 35 ................................. TCGTCCACTACCACCATGTCAAACGGCCAGGCATT 196175 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 100.0 35 GTCGAGGCTCGTGAGAGCCTTGTGGATTGAAAT # Left flank : ACAAGAAACTTGAGGCTTATTTTAAAAGTAAAATGAAAGCGTAATAAGAGAAGCTGATATTTGGAGATTGGATTTTATCTTAAGCGGCTTTAAATTAGTGTGAAGCGCGGAATTATAATCTGTTATATACTTTGTTCATATAAAAAATATAAACATTTATGTAAATACATTTGAATTCTTCGAGCGTGACAAAACATAATAAACTGCTGGGTACACTGTTAACTGCGACCGCCATTTTAAATGATTGTTTAGGATTGTACGGGAAAATTTAGCACATATGGATAATGGAGGTAATTTAAAAGAGGGTTGATTTTTAGTAAGGAAACTCTGGTGCGAATAATAGTTGCACATAAAATTCCAGGGGGATTCGCACTGCAAACGGCCGGAAAATAGGATTAAAATACGAGAAAATTTTTTGACTTGCTGGATGATTTGTTGAAGGTGTATAATTAAGATATATAAATTTGGCATGGATGCAAGGATAATTGTGTATTTTTGCT # Right flank : TCAACGACTGGAAGTTGGAAGCACTTATGTTGACTATACATCTTTACTACTCACCTCGAAATACTCTATAATTCCCAGTGTTACAAAGAAAATATATTTAAAAGGGAAGGGGAAAGCTGCTATGGCAAAAGATATTAATATTCAGGATTTAATAAACAAGATAAATAAATTTAGAGAGGAAAGAGACTGGAGAAAGTTTCACAATCCTAAGGATTTATCAATCTCCATTTCACTTGAAGCATCAGAATTGCTGGAATTGTTCCAATGGAAATCAAGTGAGGAAGCGGTAGAAAATAATCTGGATAGAATGAAGGATGAAATTGCTGATATCTTTATATATCTGCTTATGCTTTCGGATGATTTGGGGTTAGATCTCTTCAGTGCGGTTACTGAAAAAATGAATAAAAACAACGGAAAATATCCAAAAGAGTTATGCAAGGGGAAGCGTGATAAGTATACAGCCTATTTAGAGTGAAAATTAAACATAATATTTCATTATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGTGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGTGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 221641-225507 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL834309.1 [Clostridium] symbiosum WAL-14163 supercont1.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 221641 32 100.0 36 ................................ ATACAGAAGCTCAGACGTAACGACGGAGTGGATCAC 221709 32 100.0 36 ................................ CTACTTTCAAACTGCATAGTTCTGATACACGGACTC 221777 32 100.0 35 ................................ ACCAACAAAGCGATTAGCGATTTAACTGGCCTTAC 221844 32 100.0 34 ................................ ATTCGTTCCTCTTACATCTCCAAACGCAATCAGG 221910 32 100.0 33 ................................ AGTTTTCAAACACTCCCATGTTCTCTGTTTCCA 221975 32 100.0 34 ................................ AAAGTTTCTCGGCTGCAGATGACGGTTTGGTCGG 222041 32 100.0 34 ................................ TAGTTTAAGAAAAACTTTAGCAAAAAACTTTAGC 222107 32 100.0 34 ................................ CTATTCTGCCGGATGGTCTGCCAGCCATTTCTCG 222173 32 100.0 33 ................................ ATTAAAGAGGGGATTGACAAGAAGACAATTCAC 222238 32 100.0 33 ................................ CCTATCAATGCATCCCTGGGCGTAAGACATCAA 222303 32 100.0 32 ................................ AGACAGTCCACGGCCAACATCAGGAGCATGGT 222367 32 100.0 35 ................................ ATTCGTATCCCGTCTTTATCCCATATGCCTATCTG 222434 32 100.0 34 ................................ CATACTCGTACAGATAATCAATATAGATTTTCCC 222500 32 100.0 33 ................................ CGGTAATTCCTTTTGCAATGCCCGAAATAATAT 222565 32 100.0 34 ................................ GTATTTAAATCCCGATTTTGTTGTACCCTTAATC 222631 32 100.0 33 ................................ TATCCTGAAGGAAACCGGCTGCGCTAATAGATT 222696 32 100.0 33 ................................ GATATTTTTATTCAAGGCGTTTCGGCAGTTGCT 222761 32 100.0 33 ................................ AAACTATCCACGGCCTGGTATCTTATATTTTTT 222826 32 100.0 32 ................................ GCCATAGCTGGACACTTCGATGATGGCATCCT 222890 32 100.0 33 ................................ TATAATACCGGCTGCCAACTGGCCGATTAACTC 222955 32 100.0 34 ................................ AGATACGGTCAAGACGGGCATTGTCCTTTATAAT 223021 32 100.0 35 ................................ TAAAACGTTCTAAAACTATATTAGAGGGAAATTTA 223088 32 100.0 35 ................................ TTTCACGACCGCATCCCATTCCGGAGACTCCTCCT 223155 32 100.0 35 ................................ TATTTTGGTATGCCCCATCAAGACCATTACTTCTT 223222 32 100.0 34 ................................ ACCCACCTTGAGATACGGGCAATTTGCATTTACC 223288 32 100.0 33 ................................ CCAAAAGGAGGTGAGGGAGATAAAGGATTTTGA 223353 32 100.0 34 ................................ GGAAAACAATAGGGCAATCAAAAAAAACTCTCTT 223419 32 100.0 33 ................................ TGCCATAGCCCGGGCGATTCCCGGAAAAGTCTT 223484 32 100.0 35 ................................ CTTCAGGAGCAGCACATCACCGACACAGTATTTCC 223551 32 100.0 33 ................................ CTTTCCTGTTATTCTGTTAAATCTTCAGTTATT 223616 32 100.0 34 ................................ GGAACGATGTAGCGTTCGGATACAGCCGTCCCGG 223682 32 100.0 36 ................................ TTCCGCTGGTGGAGTGACTATGTACGAGGTCGAGAT 223750 32 96.9 34 ....................A........... ATGTATTGCAGTCGGTTCGCCGTCGCCATGATGA 223816 32 100.0 36 ................................ TACCATAGGGAAGGAGGGCACCACATGGCAGTAGTC 223884 32 100.0 34 ................................ GATGTGGTAGACGAAATGAAGGCCGAAGCAAAAG 223950 32 100.0 35 ................................ CGAAGAATAATTTCTGTGTCATAGACAGGAACCGG 224017 32 100.0 35 ................................ CGGCAATTCTTCCACTGTCGTATATAGTGACTGCA 224084 32 100.0 34 ................................ GTAAAATGCGCTCCATGCATCCCCGTAGGCTTTG 224150 32 100.0 33 ................................ TTTAATGCCGCCTCTTCGGATACCGTAATCGTG 224215 32 100.0 34 ................................ AAGCCCTATACCGTCCTTATTCCATATCCCTATC 224281 32 100.0 34 ................................ CTGAAGGTCTTCTTTGGTCAGAATCAAAATAGCG 224347 32 100.0 34 ................................ ATTTCCTGCGTGTCGTAAGCACTGGAGCCTTTCA 224413 32 100.0 34 ................................ TTTATATTGCTACCGTCATAGTTTTCAGGGCTGT 224479 32 100.0 34 ................................ AAACCCTTTCTGGTTCCCATAAGTGCCAAATCGC 224545 32 100.0 35 ................................ ATCAAATGCAGATACCCGGCCGCGCTGAATCCGCC 224612 32 100.0 34 ................................ TTTGATTTAGTCAGACCTTTGATTTCTGACATTG 224678 32 100.0 35 ................................ CTTACTATTCATTTCACACCTCCATGGTCTCAATC 224745 32 100.0 33 ................................ GACAGGCTTAAATTATCCTCCATCGTGAAATGC 224810 32 100.0 34 ................................ TTTTTACTGTGCTATAATTTCCATATTGAATACA 224876 32 100.0 36 ................................ GCCAGATCGGCGTATGTAAATGACATCCCGTTATCC 224944 32 100.0 34 ................................ AGCGTTCTTGTCGCTGACCTGTTTGGTCATCTGG 225010 32 100.0 35 ................................ ATTATCAGCATAGTATCCATCATATTACCGCAGTT 225077 32 100.0 34 ................................ ATTTGAAACGATGATACAGTTTATTGCGCAGGTA 225143 32 100.0 35 ................................ CCGTAAAAAGGGCAAGGTAAAAATATGTGCGCCAT 225210 32 100.0 34 ................................ ACTGTCGATTGCATATGCCAGCACCTGAGAAACT 225276 32 100.0 36 ................................ TAAGTTTCGCGGTTGGCGAGAAATTAACGGTTTTGT 225344 32 100.0 33 ................................ GACAGGCTTAAATTATCCTCCATCGTGAAATGC 225409 32 100.0 35 ................................ GTTCCGTAAACTTTCATAAACACACAGCTTTTCTT 225476 32 87.5 0 ..........................T..GGT | ========== ====== ====== ====== ================================ ==================================== ================== 59 32 99.7 34 GGTCAGGCTCGTAAGAGCCTGTGGATCGAAAC # Left flank : GAAATGAGGTGATGGATTTGCTCGTTCTTATAACCTATGATATTAACATTACAGAAGCCGCAGGGGCCCGCCGTTTAAGGCGCGTAGCCAAGCAATGCGTAAATTATGGCACACGGGTACAGAACTCTGTTTTTGAATGTCAGGTGGATGCAACGCAATATGTGAAGCTAAAACATCTTCTGATGAAAGAAATTGACGAAGAAAAAGATAGTCTGCGTTTTTACTCTCTAGGTAATCATTATAGCGGTAAGGTTGAGCATTTTGGCGTGCGGCGCGGAATACAGGTGGATGAACCTTTAATTTTATAAAAGAACCGCAGGGAAGATGTCTTGCCTTATCAGTGCGAACCCGAAGTGAACATGAATTCTGTGGGAGGTTCGCACCTGGATTTTGGTGTAAATTGGAGGGGATTCTGGTTTAGAGATAAAATTAAATATCATATTTGGATGATTTGAATAAAAAGTAATGTAAAAAACACTCTAAAACCATGAATTTTTGCT # Right flank : TTTTATTGGCGCAAAGAGATGTGGATTCCGGGGATAAGAGATCGGCAGATGAAATCTGTCAGCAGGAACTGAAGAATGCTGTCTGCATCACACTTAAGGAAAAGGGGGCTCAGGAAAAGGGGAGTCTTATGAAAAATGTGATCCGGACGATGGGGTATGCCCGAAGCAGTACTTCCTTAGTGGAGGCTGCTGAAAAGGGGATGAAGTATGGAAGGAAGACAGGGGAGATTGTGCAGGATGAAGAGAAGCGGTTTAGGCTGGGAAATTGACAATCTTGCTAAACTGAAAAGTGCAGTTCGCTAAGGAAGAATGATACCCGGTGTCAGAAAATAGTTTGGAGAAACTGAGTAACAACAACAGCAAAAACAATCATTCATAGCGATTAAATCACCAGAAGAATTTACCTGCACATTAGGAAATGATTAATAAATTCTTTAGCATTCAATAATACAATAATTCAAAAGATTTATTATAATGTTAGAGGAGATAAAAATCATGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCAGGCTCGTAAGAGCCTGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GGTCAGGCTCGTAAGAGCCTGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //