Array 1 17068-18893 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHVMY010000035.1 Pseudomonas aeruginosa strain HPAS5 NODE_35_length_23931_cov_47.6458, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 17068 30 100.0 37 .............................. AACGACACCTCCTCCGTCTGTGCAACCTGCAGGTCGT 17135 30 100.0 37 .............................. CCTGAGCACTTCGAGGCTGGTCGCTGCCTGATGCTGT 17202 30 100.0 36 .............................. ATGCTGACCGTCATCCATGCGCCGCCGATAGCCAGT 17268 30 100.0 37 .............................. AGCCTGGCGGGCCTTGCTTGCTGCACACGTTCACGGT 17335 30 100.0 37 .............................. GGCCATTCCTGCACTTCGACCTTTCGACCCAGGAGGT 17402 30 100.0 36 .............................. ATGCTCATCAGCAACCTCAGTCGCTCCGCGCCGTGT 17468 30 100.0 36 .............................. ACCGTGGTGGTACCGACATCAACACCGGTCACCAGT 17534 30 100.0 38 .............................. ATCCAGAGTTCGCTCGACACCTTTCTTCCACCTCCAGT 17602 30 100.0 35 .............................. TGCCTCATCCCGGGTGAATGGATCTACCAGCTTGT 17667 30 100.0 37 .............................. TCGCGCCCATGCGGACCGATGGTGTCAGCAAAGACGT 17734 30 100.0 40 .............................. GCTCAAGCCCTCTAACCAAGCTTCGACCCTTGTCGGGGGT 17804 30 100.0 37 .............................. CACGCGGGTGACTATGCGTTTACTAGCTATAGACAGT 17871 30 100.0 37 .............................. TTCGATAGAAGTTCCGAGTTGAGCCGCCAGGACAGGT 17938 30 100.0 36 .............................. ACGGATATCTATGACGGCCCTGACCTGGTGAGTGGT 18004 30 100.0 36 .............................. TCTTCCGTTCGATCTTTTGATGCATTTCGATATGGT 18070 30 100.0 36 .............................. TGGGGATGGCTTCGGACGGGGTTGACCCCTTCGAGT 18136 30 100.0 39 .............................. ACTGCTTGCTCCATCTGCTCAACTCCTGTCCTTTCTGGT 18205 30 100.0 36 .............................. TGGCCGGACGCACTACTGGTTGAGCACATGGCGGGT 18271 30 100.0 36 .............................. CGCACCGGCTGAACACTCCAGCGCGCCTCGTAGGGT 18337 30 100.0 35 .............................. AGCCTGGCGATGCAGATGAATGGCTGGAGTCGGGT 18402 30 100.0 35 .............................. CCCAACGCAGGCCCGATCCAACCCGGCCCTGCGGT 18467 30 100.0 35 .............................. ATCCAGCCCATGCGGTCCCGCCTGCTGTGCGATGT 18532 30 100.0 36 .............................. TTCGCGATGCCGGTCTGTCCCTGCATGAGGGACTGT 18598 30 100.0 37 .............................. TACGCGCTTCAGCGCTGAGTTGACGTTCTGCGCGCGT 18665 30 100.0 35 .............................. ACCGTCCCGGAAACCCTGGTCGGCCGTAAGTCCGT 18730 30 100.0 38 .............................. CGATGGTACGTATCGGCAAGCTTCAGCAGTTCCAGCGT 18798 30 100.0 36 .............................. TTCGGTCGGCAGATCAACTTCGAAACGCCGTACAGT 18864 30 93.3 0 .......................G.....G | ========== ====== ====== ====== ============================== ======================================== ================== 28 30 99.8 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGGCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTGGATAGCGCGCAGTGGACATTCCTTAAGCATCGTCTGTGCAACCTAATCAATCCGGAACAAGACAGTCTACGTTTCTACTACTTGGGTACGAACTGGCAGCATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTTAATGGCCCGCTGATTCTTTAGCGCCGGCGCGAACCTAAAGCGACCGACCAAACCCTGGGGGGTTCGCAACTCTCTAGCTGATTGATTTATATACTCTTTCTTTGAAGTTAGGAGTTTGAAGGCGCGCGCCTTGCTTAAAGAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAATAAGTTATAAGAGGGCGGT # Right flank : GATAGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCCCAGAGTCTGGCCAGGAACTCTTGTGTCACGGTGTCGCGGCCCCAGGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGTAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGGCTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCAAGGGGCGGTGAAGCCCCTCGGGGTGTAGTCCAACTGGTGCAGGGGAGCGTGGTGGCTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCCCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCGGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //