Array 1 1164060-1166913 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLZK010000001.1 Campylobacter massiliensis strain Marseille-Q3452 NODE_1_length_1356177_cov_34.9111, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1164060 30 100.0 36 .............................. CATCCTAGCAACCGAATAAGCGACTAAAGTTCGCTG 1164126 30 100.0 36 .............................. ATTCAAATTTGAACGAATTTAAACGAGATATTGAAA 1164192 30 100.0 37 .............................. AAATCCTCATATTCCCCTTTTTTGTCGGAATAATCAA 1164259 30 100.0 35 .............................. CGTCAGCACCGACAAAATAACTCTTTTTCATCTGA 1164324 30 100.0 36 .............................. GTTTTCGATGCACCCGTGCTTGAGGAGCTAAAAAAT 1164390 30 100.0 35 .............................. TAAAGCGTTCTAAGCTCTATTTCTAGCAAATTTGC 1164455 30 100.0 35 .............................. CTTCGCGCGCGCTACGCGCCGCGCTCAGTTTCCGC 1164520 30 100.0 35 .............................. TCTAATCTAAATTTTGTGTCGTGCGGCGCGTAGCG 1164585 30 100.0 37 .............................. AACACAATGGCAAAGACTACGGCACCACTATACACAC 1164652 30 100.0 36 .............................. ACCGTAAAAGCCTGAGCCATCACCATGACCCGGACC 1164718 30 100.0 34 .............................. AAGTGCTTTTGATATGTAGATATATCGCTTCTAA 1164782 30 100.0 38 .............................. CAAATTTCTGAAAATCAAACGGAGTTAAAGGAAACTAA 1164850 30 100.0 38 .............................. CTGCATAAATAGCGAACATGCTACGCTATCAACTTTAA 1164918 30 100.0 38 .............................. ATTTTACAAAAGAATTGTTAGCAAAGGAACCAAAAGCC 1164986 30 100.0 36 .............................. TAAGAAATACGGCCGTCAATATAACGGCAACTATGA 1165052 30 100.0 35 .............................. TCATAAATGATAACTTCCTTATGCTCGGGGATATT 1165117 30 100.0 36 .............................. CAAGATGTATCAGTCTGACCGGGTCAATAATTTTAA 1165183 30 100.0 38 .............................. AACTAGGTCTTAAGCGCGTCGTAAAGGATAACTTCCGC 1165251 30 100.0 34 .............................. TTCTTTCCCGCCAAGCTTCAGGCGCTCTGCGCCG 1165315 30 100.0 34 .............................. TAAAATCTAAAGATTTGAAACAAGCTAAAAAAGC 1165379 30 100.0 35 .............................. CGAAGGTACAAAAACCAAGTTCCAAAAAAATACGG 1165444 30 100.0 35 .............................. GGCGTCCTTTGACCGCGCCTATACTAGGCACGAAA 1165509 30 100.0 36 .............................. GATTGACAAGGCGGCCTTCTTTGCTTGCTCCGCGCG 1165575 30 100.0 37 .............................. TAAATTTCTTGTTGTGCTTGCGTGCGCTCGACTTCGC 1165642 30 100.0 34 .............................. CATCCCAAAGATCAGCTACGACTTCATTTCCCGA 1165706 30 100.0 35 .............................. ATTTTATGAAATCGTGCTTGGATAGCTTAATAAAA 1165771 30 100.0 35 .............................. ATTCAAATACTCGACAGTGCCAAAAATGTAATGAT 1165836 30 100.0 37 .............................. TCATATCTACCGCCGGCTACAATTTGCAAGGCGAGAT 1165903 30 100.0 36 .............................. AACCTTGATAACCTGCAAGGGCTTTGTAGGAGTTGC 1165969 30 100.0 36 .............................. ATTTTTATTTGCGATCCTAGCTTTAACTTGACCTAT 1166035 30 100.0 35 .............................. TATACACAGCTTTTTCATATTCTCCCATATATAAA 1166100 30 100.0 35 .............................. GATTTTGACGGGGCGTATCTAATGGAGATTTTTCA 1166165 30 100.0 33 .............................. AAAAACTCCGATAACGCATAAAATCTATCGACG 1166228 30 100.0 36 .............................. GAGAACAAGATGCAAGAGCGCTAGTCGGCTCAAAAA 1166294 30 100.0 35 .............................. AATGAAGCTAAAAGTCAAAAAATAAAACAGCTTCA 1166359 30 100.0 35 .............................. CCACCGCCAGGGTTATTAGGATCATCAGGTTTAGG 1166424 30 100.0 36 .............................. CCGCTTCCAGGATTGCCGACTAAACAAGTTATCATG 1166490 30 100.0 34 .............................. AAACTACTACAATCAATGCAAGAACCATCAGTGT 1166554 30 100.0 36 .............................. CGACCCCGAAACGGGCGGGATGACCGAACAGATAAG 1166620 30 100.0 36 .............................. TTGAGCTCTATCTCAAATCTAAAAACCGCGTATGAC 1166686 30 93.3 34 ..........A.......C........... TAAAAAACCTGCAAAAACCGCTAAATGACCCCGA 1166750 30 96.7 37 ..........A................... CCAAATCTTCGCATATTCTCCGCATATTTTTCTAATA 1166817 30 93.3 37 ..........A..................T CGAATTCGTCTTGAAATTTGGTCGGGTTTGGCGAGCC 1166884 30 80.0 0 ..........A..............TTCTG | ========== ====== ====== ====== ============================== ====================================== ================== 44 30 99.2 36 GTTAAAATTTGCTCCGTTGGAGTTTGAAAC # Left flank : GAGGCTTGGCGAAACGATTTCGCTTGGTGGGCAAAATCTCACGTGGCGGCAGGTGATCCGCCGCGAGGCAAATCAGATCAAAAAATGTATCTGCGAAGATGCGCCTTATGAGGGGTTTAGGTGGGGGTAAATTTGGTCTTTTGTCGGTAAGGTCCAGCAAAAGGTCGCGGTTGCATTTTGATGATTTGATTTTAGAGTCCTGACTTCATCAAAATGCGGCACAAAAATCGCTACGCATTTGCGGTTAAATTTGACTTATGCGTCTTTGGCTACGGTGTCGGGTTGGGGGGGGTGCTAGCTTGCTCTTTTCGCGGTGGGATATTTGATTTTTGAGTGGCTTTTTAAATCCAAATCATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGCTGAAATTTGGGCCATTTTATATCTATGCTATTTTGAATTTTATGCAAATTTAAGGCGTAAAAATATAGACTTTGGTTTTTAGTAGCCCTAAAAATGTATATTTTGGTGCT # Right flank : GGTAAGTAAAACAGGCATATTTAAAATACTTGGGGTTTTTTAAAGTAAATAAATATAGAGGTTTTTTGGGGATTTTGAATTGATAGGGCCTTTCTAGCCCTCTATTTTTATTTACTATTCTAGCCGTAAATTTTCTTTAAATTTGCAAGATTTGCGCTCAAATTTAAAAGCAGCATATCGGCCGTTACTAGTCTAGCCATCGCGGTAGCTACGACGCTGCCGCGCACTCCGATACACGGATCGTGCCGTCCGCGCAGTTCGCAGAGAGTATCCTCTCCGCGCACGTTTTGCGTCGGCTGAGGTAAAAATATCGACGGAGTCGGCTTAAAATGTGTCTTTATCACGACCTCTTGTCCGCTCGTCATGCCGCCCAGCGTTCCGCCCGCGTGGTTTGAGGCGAATCCGAATTTCTCGTTTGAATTTAATCCGCGGCAAGCCTCGCCGTCCGCCTCGCTTTTGCATTCGTCAAATTTGCCGCCGTTTAAATTTGTCGGCTCGTC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTGCTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //