Array 1 63200-61539 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBWZ01000012.1 Aneurinibacillus tyrosinisolvens strain LL-002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 63199 29 100.0 39 ............................. ATTAAAGAAACGCTAACAGCCTACAACCGCAGCCGGAAA 63131 29 100.0 36 ............................. GCGGGACCGCACAGACGGTAAACGTTGAGATTATCC 63066 29 100.0 35 ............................. GGAATACAGCTAGGCAATCATTGGTTATTAAATAT 63002 29 100.0 35 ............................. GAATTAGTACCCACATAAAGACGAAGAGTAGTTGA 62938 29 100.0 35 ............................. GGGAGATCACGGAATTGACTTAAAGCTATTTAAAG 62874 29 100.0 36 ............................. TCGATGATTCCGCTGATTTCACCCGTCTCCAAATCA 62809 29 100.0 35 ............................. CGGTCATTTCTTTTTCTACGTAGGTTCCATTTTCA 62745 29 100.0 37 ............................. GACGGTACGTATGCAGGTGAAACAAGGAGCGTGACAT 62679 29 100.0 37 ............................. TGTATTATCATCAATTGAAGGTAAATGTTTATTCAAC 62613 29 100.0 37 ............................. CCGATTTTGAAGCCTCTAACATATTCGCAACCGTACT 62547 29 100.0 37 ............................. TGTTTTATAAGTTTCTACGCCTTCGCTATGGATTACA 62481 29 100.0 36 ............................. ATGGGACAATGCCGGTAAGCGTTGGGAATGGAACAG 62416 29 100.0 35 ............................. TATGTCAGGGGATGGTACGTTTAAGAAAGTACAAC 62352 29 100.0 37 ............................. GTGCAATAAAAAGCGTTTCTTGTGCTGGTCCGACGTC 62286 29 100.0 37 ............................. AAAATGGCTGGACCGTAAAGTAAGAAAAATCGTGGAT 62220 29 100.0 36 ............................. ACCTTTGCTTTTGGTTTTTCTTTTTCCGGTGAGTGC 62155 29 100.0 37 ............................. GTAAAGCATAACGGTGCTCTAAATCGTGGTACTTATC 62089 29 100.0 36 ............................. AAGTGATAACTAGCATTTGTGCTGATTTAACTGCCA 62024 29 100.0 36 ............................. GTATAAATATATTCAATAAAGGCAATACTACAAATA 61959 29 100.0 36 ............................. TATGAAAATCCGATCTAGTTGGTGTATTCTAGCGTT 61894 29 100.0 36 ............................. GGGATATGATCCGGACGCAGCACATCTTTGTGAAGC 61829 29 100.0 36 ............................. TTAGTAATAAGGGATTCCGTCAAAATAATTGGTTCA 61764 29 100.0 37 ............................. GCGTATTGAAAGACAGCAGCCGGCCGCAGAATCCATC 61698 29 100.0 35 ............................. TAGGGGTTAGTTCTTCTGCTTGGACGGATTCTTTT 61634 29 100.0 38 ............................. AGATAAATGGATGAAACATATCGAATCGGAGTTACAAA 61567 29 96.6 0 ...............G............. | ========== ====== ====== ====== ============================= ======================================= ================== 26 29 99.9 36 GTTTTATTTGAACGTAGTGGGATATAAAG # Left flank : TGTCGGTGATACACCATATAAGCCATTGAAAGCGTGGTGGTAAGCATGTTTGTTATGATTACATATGATGTTGGTGAGAAAAGGGTAGGAAAGGTATGTAAAAAACTAAAACAATATTTGGTATGGACACAAAACTCAGTGTTTGAGGGTGAGATTACGAAAGGGAAACTAACAAAGTGCCTTCACGAATTAGAGTTAATCATGAACGATAGGGAAGACTCCATTTATGTATATGAGGTGCAAAATCCCAAAAATATAATAAAGAAGGTTGTGGGTGTTGAGAAAAACTACGAAGACTTCTTTTTATAAATCAACTGGCTGATTGATTTTGCAGTGCATCGGACAGTGTGGAATAATGGGCGAAATCCTTGATGTTATTGGCTTGAGTCCTATTTTTGAAAGAAAAAGTGAAAATGAATGTCTGATGTACTGCAATCAAAGGTGATCAATGATACACTAAATGCAGGTATATCAAGGGTTGAATGCGCAAAAATTTAGGG # Right flank : CTTTATTTACGCACCTGAATGTAAAAATTTCTGTTAAAATTTGCTCATACATAGCACAAAGCCCTGCTCAGGTCGCCAAACTAGCGCAGGGCTTTTCGATAAGGTATTGCTACATGTTTTTTGTTGAATATTGAATTTATCATTATTCTAACACGGAAAAAATATGTATGCAAGTACCTCTGTTCAGCTATGTTCAAAAAACATAAGTCGAGTCGGAGGTTTTTTTATGGCAACGGAAATATTTAAGCACGCAAGAAAAAGAGGGCAGAGTATTGTCGAGAACGCTTTTCTTGATGATAGTAACGTAACTGGAATGGCGAAGTATCTTCTCATCCAATTCTGTTCACACCGAGAGGGAACGTGGACGATAAATATGAAGGACATTATTAAACGTTCCAAAGACGGACGAGACAAGCACTATAAAGTGGTCAATGAACTCATACATAATAATTATATCGCTAGAATTAAAGTTTTAGAAAAAGGCATACATCGGAAGCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 76363-74101 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBWZ01000012.1 Aneurinibacillus tyrosinisolvens strain LL-002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 76362 29 100.0 36 ............................. GAAGTTCAGCCGCTATGGAAACTAATGACCTGGCGA 76297 29 100.0 36 ............................. TTGGTATACTGTTTCCCTCCACGAGATAAAGGTTTG 76232 29 100.0 36 ............................. ACGTCTGAAGAACTTTCCATCCGATTCATCTGTTCA 76167 29 100.0 37 ............................. GAACGTTACGGTCATGAGTTTATCGAGTTGAGGAAAA 76101 29 100.0 37 ............................. TTGGAAAGAGGATGAGGATTGACCTGTTTCTCCCTAA 76035 29 100.0 36 ............................. ACAGAAAATCTCATTGTCATTGACCGGACGCAGGAA 75970 29 100.0 37 ............................. TACAAAAAAGAAACCTTACCGATGCAGCAGCAGAATT 75904 29 100.0 35 ............................. GTTTACATCCGGCTTGCAATGCGAATTTAATCGGC 75840 29 100.0 38 ............................. GGATACTTGATTTTCAGCCTATTTATAAACTCGTTGTA 75773 29 100.0 37 ............................. TTAATTGAACCGGGTCAACATTGTCCGGAACAAATAT 75707 29 100.0 38 ............................. AAAGGATGAGAACAAGCAGATCTAATGCATAAAAATTA 75640 29 100.0 37 ............................. TAGAACATTGGTGTTCTTTTCTAACTTCAAAGTAAGC 75574 29 100.0 37 ............................. AAATATGTTCGTGGAGCTATTGAACAATCCATGAGTG 75508 29 100.0 38 ............................. TTGTTAACATTTCGGCTGACCGCGCTCCAAAAGTCTCA 75441 29 100.0 36 ............................. ATGCTCCATTCCTTGCAGCTAGGTTATCCTTCGGAA 75376 29 100.0 37 ............................. GAAAGACCACCCAAACCCCTCGAAACGCAATGCTGAG 75310 29 100.0 38 ............................. GTAATAACAAGGCTTTCCCCCTCACCGATCGAAAGTTA 75243 29 100.0 37 ............................. TTGTAAGAAGCCGGGAGTTTAGATTCTAATTCATAAA 75177 29 100.0 38 ............................. TTTGTTTTATGTTCCTGGATAGAGTCATCTATATTCTC 75110 29 100.0 37 ............................. TTATTTCACGTTCGTCATTATCTTCTACAACAGCTTT 75044 29 100.0 35 ............................. GCATGCCGAAGGATGTGGCAAAGCTCGTGGTAGAA 74980 29 100.0 36 ............................. AGACAGCGATTCGATCAAGGCAAAAACAGGAAACAA 74915 29 100.0 34 ............................. TATTAAATCGTTAAATAATGTTTTGCATCCTTGC 74852 29 100.0 37 ............................. GTAGGGCTTCACTTCTGCTGTCTCGTAATCCTCTCCC 74786 29 100.0 37 ............................. TAATAAGGTTCATGATAATATTCCGGATTGTTAATCA 74720 29 100.0 38 ............................. TCGTCTGCGTTAGGGACAGCTCATACGTATCCTATCAA 74653 29 100.0 35 ............................. TATAAACATGATTCGTTATATCTTTGTTGCATCGT 74589 29 100.0 37 ............................. GTACATTTCCTGGCGCAAGCTTTCTATTGTTATTTCC 74523 29 100.0 37 ............................. TGAATCGTTTGCCAAAAAGGCAACGTGAACTTATAGA 74457 29 100.0 35 ............................. ATCCACAAACCAGGACATAGCGATTCTATCCCCGT 74393 29 100.0 37 ............................. TTCAATCTCATAGTCACAGGAACATATTGGCGAACAA 74327 29 96.6 36 ......................C...... TAAATTTGTTCGTTTTGTTAATCATGTTCAATATTC 74262 29 96.6 36 .............A............... ACTGCAAAAAGTGTGCGTATTATACATTCTGTTATG 74197 29 93.1 38 .................C......C.... AGATATGAAGCGCCAGCCATTCCAACGCTGCTGTTGGG 74130 29 72.4 0 A...........TC......AG....GGT | C [74103] ========== ====== ====== ====== ============================= ====================================== ================== 35 29 98.8 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : GAGGGTGAAATAAAGACCTTTTCTATAAATCGTAAAGGAAGATGAAGAGAGAAAGCAGCCGATCAGTTACGAAGAATGGCTGCTTTGTTATGTCGGATAATCCAGCGGGATACAAAAGGAAAGATATTTAAAATCCGTGTGCAGATTAAACGTCAATACATAAGGGATTTTTCACATCCACAGAACATTACCTTTTCTCACTATAACGTTTAAGGAAGGAGAGACAGGCGATAGGGAGATTAATGCTGTTTCATCATAGAACAGGGTAGCTTCTCCAGCTGTAAAAAAGGAATCCTCCTGTTTATTTCAATAGAGGAATGATTTGATTTTGCAGTGCATCCGAAAAGGGAAAGCAACAAGTGAAATACTTGATATTACTGGCTCAAAATGTGTTTTTGAAAACAAATTTGAAAAGTAACGTCCGACGTGCTGCAACCAATCGGAATCAATGATAGACTAAATACAGGTATATCAAGGGTTTTCTCTGTTAAAATATAGGG # Right flank : ATAAAAAAGTAAAACTTAATTCGTAAATCAGGTAGGCTTGTTCCTACATAGTTAAATATGAGCGTCTTTTTTATATGCCATGCTTATACTAATTGATAAAGACTGCTTAAAACCGATGCAAGCGCGAAGAACAAAAATAGCGGAAAACCGGATAAAATCAAAACTTATAAATAACCAACTGGTTAATAAGTGGGTATTTTTTACAATTAGTCCATACTACAATAAAGATGTGGATATGAAAAATCATCTCCACATTTAATTATGCCGATAAAATTGGGCGGAATTACACATAATGTTTATATCAGTGAGTTGTATCAATCTTGCCCCTAGATGTTATACCTACAAGGCAGCTTAATGAGCACGATTTAATGAGCACGATTTAATGTGCATGATATTTTAGTCATCAATTATTCGAAATTAAACCGTTTTTATCATAGAAAACAAGTTTATACTTGAAATATAAATGCCATGTTGCATAAACATAGCCAGGGAACAGGGGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 51241-51606 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBWZ01000002.1 Aneurinibacillus tyrosinisolvens strain LL-002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 51241 30 100.0 36 .............................. ACATATGATACAATACGTCTGCCATTTTTGGTAGGC 51307 30 100.0 38 .............................. CCTCTTGAGTGGATGGGAACGATGCGGTTGGTGGTTCA 51375 30 100.0 37 .............................. GAAAATCCTGCACCGTTTTCTCCTGCACTTTCACTTC 51442 30 90.0 37 ....G...CA.................... TACCTTATCCTACAGGTGCAGTCAAAATAAGGTATAC 51509 30 90.0 38 ....G...CA.................... TCTTTTAAACCTGTGTATTGCATAATCTGGTCTAGCGC 51577 30 83.3 0 ....G...CA..............C.G... | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 93.9 37 GTTTTTAGACTACCTATGAGGAATTGAAAC # Left flank : CACGGAAGAGGATACGGTGGTTACAAAAGTTTTCTCGGGCCGTCCGGCGCGGGGGATTCGCAACCGGTTTATTGAGGAGTTTGACGCATCGGGAATTGAACCGCTTCCTTTTCCGAGCCAGAATACGGCGACAGGTGAGGTTCGCCGGGCAGCTGCCGCACACAATGATGCGGAGTATTTGTCGCTGTGGGCAGGGCAGGCGACCCGTTTGCTGACGGAAGGGGAACGGGCGGAGGAGATTGTGGAAGGGGTTATGGAAGAGGCGCGAAAGTTGATTGGAGTGGAGTAAGCGAGATGATTTCTCCTGTTGATGGGGAAGGGTAGCGGTTTTATATAGTTATATGGTTTGAATTTTTGTCGTCGATCGGCGGTGCTGTAAAAATACCGGGGGATCGACGACAGAAGGAAGTGAGGAGGGACGGGGGTTTCGTCCCTTTTGATGTTTTCCGGTATAATGGATGTTGAGTTGTGAAAGTGCTTATTTTGTGGGCGAAAAATGG # Right flank : CAGTAGCACATCAACTGCAATAAAAAATGACTTATAAGGATGCATTGGAATAAGAACCCAACTTTTTTAACCCTGCAAATTACTTATAAGTTTACCAATTGAATAATCTTATATTTTATGGTATAAAATATAAGATTATAACATTAATATAACTTTATTGGAGGTTATTATGTCCAGTTTTCTAAATGATTATATGAATAAAAACACAGGTCATATTATCAATTCTACCGTATTGAAATTAATTGCTAGTATATCTGAATATAAAGGGAAACAAGGTCTCTACGAACAGCAATCTCCCGAGATACTAAAAAAATTACAAGATATAGCTACAATTCAAAGTACAGAGTCATCTAACCGAATTGAGGGTATTTTCATAAAAAACCAACGCCTTCAAGAGTTAATGAAAGAAACAACCACCCCGGAGAATCGACCGGAAAACGAGGTAGCTGCTTACCGTTCCGTGTTATCTCAAATCCATAGTGCTGCTACGGACATTCCCA # Questionable array : NO Score: 8.96 # Score Detail : 1:0, 2:3, 3:3, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGACTACCTATGAGGAATTGAAAC # Alternate repeat : GTTTGTAGCATACCTATGAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 53027-53256 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBWZ01000002.1 Aneurinibacillus tyrosinisolvens strain LL-002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 53027 29 100.0 38 ............................. CATGATGATAATTCTTGGTTGCGTGGGCGCTGTGCCAC 53094 29 100.0 37 ............................. TTAATTGACCTTGTTCACTTCCAGCGTTCCTGTCGGG 53160 29 96.6 39 .........G................... TTTGACAATAACCGGGATAAAAACCGAAAATGTTATTCC 53228 29 96.6 0 .........................A... | ========== ====== ====== ====== ============================= ======================================= ================== 4 29 98.3 38 GTTTGTAGACTACCTATGAGGAATTGAAA # Left flank : TTGGCACGAAGGAAATCATGATTTATTACCATGGCTCGAATACTTTTTAGGGATTATTTTAAAGGCTTATCGGGAGCTTGAGAGTCGCGTAGGTATTGTTAGCGAATCAAGAGGACAGAAAACGGAAAGAGTAAGAGAAATTGTTTTGGGGTTCCTAACTCCTTTTAGTGTTCGTGAAATAGAAAATCGTTGTCCTGATATAAAAAGGCCGACCATAAATGCGACATTGAAAGCAATGCGTGAGGAGGGCTTAATTGAATTACAGGGATTCGGACGGAGTGCCAAATGGAAGATTATATATAAGGACGAGATTGAAACGAAAGATTTTTAAATGAGCTATTGCATAAAGGTTTTTCTGTCGTCGATCGCCAGTACTGTAAAAATCCTAGGAGATCGACGACAGAAGGAAATGAAGAAGGACGTGTGTTTAATCTTTTTTGTGCTTTTTGGTATAATAGGGGTTGAGTAGTGAAAGTGCTTATTTTATCGGTGGAAAATGG # Right flank : ACCTGAAAATTGAGTATCCCCCAGTAACGCAGTTCTAGTATAGTTACCTCTACATAGTATATTCCTGCCGAAATGCGAGTGGGGATGTTCTGAAAAGAAGGAAATGATAAGGAAACAAAATGGATTCCTGAAAAGTGACCTCGGGCTTTTGCTGCAGCTCGACCAGCTATACAGCGATATAAAAAGGATAGCTCAGGTACTTTGCATGCCTGAATCTATCCTTTTTTATCGTTAAAGAAAGTATATGTTGCTTTAAAGTGTTAAAGGGAATTGCTATCATGGGACCGTGCGGTCCCAAAGTCAAAGAAAAACATCGCGGGCGATGACGGCTCTTTTCTTTCCCCCTGTGGAGCGCGCCTGCCATAGGGCGAAACAGACCGGCAATTGTCTCCAACACCTAAGCTACCCAGATGTTTTGCCGGTCCGCCCGGCGTGAGACTAAGCGGCCGTCCAGCTTCCAGAAGGGGAAAGGACGAGCGGCATGCCCGCGATGTTTTTCT # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGACTACCTATGAGGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 66216-65983 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBWZ01000024.1 Aneurinibacillus tyrosinisolvens strain LL-002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 66215 30 100.0 36 .............................. ATAATAATAAAAGCTGCATATACGACCGTTTTAAAG 66149 30 96.7 38 ........A..................... TCTTTTCTCTTCGCCATTTTTATCACCTCCAATGTGTA 66081 30 96.7 39 ....A......................... AGGAAGCACAAAATCAACTAAAAGAAAAAGACCGTCAAA 66012 30 80.0 0 ....T...C........A.....ACA.... | ========== ====== ====== ====== ============================== ======================================= ================== 4 30 93.3 38 GTTTGTATTGTACCTATGAGGAATTGAAAC # Left flank : GATATTTCCTCTATCATTTATCATTCATAACCCTCCCTTTTTTCGAATATATGTTCTTATTTTACGACTAAAAAGGGATGGATGAAAAGTCCTGAGTTGAGAAAATTATGCAGCTGGATTACAAAATTTCTCAATAATAACTATTCCGAAACAAAATTCACCAGAAGAGTAAGTTAAAGTAGTTTTATTCTCTTGATTCAATAAGGAATGTAAAGGGACAAAAACGGATAGATATCATTTTAGATATCGAAATAAACATTTAAAAACGGATGTAATATCACATAACATTCGATAAGTGATATTTTGCAGTGGATAGGGGAAGAGGAGGGGAGACTTGGTGTTTTTGATGCTGAAAAGTGTCGTCAATCGGGAGTAATGTCAAATTCCTGGGAGATCGACGACAAACGAAAATCAGCATTCATGCCAATATTGTGGTTTTTTCCTTATTTTGTTATATTTAATGTGAAAATGAAAACGTTGATATTACGCTTTTGGAGTGG # Right flank : AAAAGGTGTCACTTTTCGGTGACACCTTTTGTAATGAAAAAAAACTCTGACTTATAATTCAGAGTTGTTGGTATTGCGTCATAAGAGTTTCCTGTTCCTTCCTTACTTCTGCTTCTATTTTCGCTTTCTCCCGAATGGCTATACATCCTTGAATGATTTGTTCTACAGCTGCTTGTTCATCCGACATTTTTACAGCTTGCTCTCGAAGAGAAATCAGTCGATATGCTTCTGCAAGGGTAGGAAATAGCTCTTTTTTAGTAAGATCAATCCCTAGATAACCTTTAAGAGCTTCCGTTTCAGTTTTAGGAAAGCTATCCAAAGGTTTTTCAAACGGACGAGGTGTAAGGATTTTGTTACTCATACGAATTCTTGGCCAAATTTCATAAGAATCGATGTCTTTGAATCCTGTATAGTTTCGATGCGCGAAAGGATTTTCATAGATTCCTTCGCTTTTTAATTGGCTGATCGTTCGTGGATTACCATGAGGGTTCTCTTTAAGA # Questionable array : NO Score: 6.71 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 73681-71196 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBWZ01000019.1 Aneurinibacillus tyrosinisolvens strain LL-002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ======================================================== ================== 73680 25 92.0 41 ...A.........C........... ACGATTGCGTCCGGCGTCAATGATTCCCGTTTTAACAGTTA 73614 25 92.0 39 ...A.........C........... GGGAATATACAAAAAGGACCCGCCAGGGGTCCTATGTTA 73550 25 92.0 41 ...A....................T ATGAACAGATATAGGACAGGCAAAGCCGAACCAAAAAGTTA 73484 25 88.0 41 ...A....T...............T ACAACAAAGCCGGATTGTTCAAACATTTTAAAAGGCAGTTA 73418 25 92.0 39 ...A....................T GAACAATATGAAATTTATTCGCCTGAGTTTGATGTGTTA 73354 25 92.0 40 ...A....T................ TTCAAACTGCTAGAGACAATGATGTTATCCCATTCGGTTT 73289 25 100.0 42 ......................... ACCTAAAACAAAAAGAACCAATGCAACCAAATGCCAAAGTTT 73222 25 100.0 40 ......................... AAAGACGATGGCGGCCGTAAAGAATGGTTAGAATTTGTTT 73157 25 100.0 46 ......................... TTGCAGCTGTCGCATTCGTAAATCCCGTTTTCTTCTATGCCGGTTT 73086 25 100.0 41 ......................... CCGGGGCATAAACGATGTTCGGATACTTTTCAGCAATGTTT 73020 25 96.0 41 .............C........... AGGAACCGGAGCCACCGGAACCAACAGTAGAGGACAAGTTT 72954 25 96.0 41 .............C........... AGGAACCGGAGCCACCGGAACCAACAGTAGAGGACAAGTTT 72888 25 92.0 43 ..........A..C........... GCTTAGAATTGTTGGAACAGTTAGCAGAAATTTTCCACGGTTT 72820 25 100.0 42 ......................... TATAAAGAACCTTGATCCGATTTTCATCTAGTTTTATAGTTT 72753 25 100.0 40 ......................... CAAGCAGATCGGCGGGCTTTGTGAGCAGGACGTCCAGTTT 72688 25 92.0 41 ..........A..C........... GTCGGTGTCGTGGTGGCCAGTTGGGGCTTAATTGAAGGTTT 72622 25 100.0 41 ......................... GAGGGAGACAGGGTGACAAACCCCGTCTTGGTTGATAGTTT 72556 25 96.0 42 .............C........... TCCTCTAAAAGCCGAGCCTTACAACTTTCAAGTAATCCGTTT 72489 25 96.0 56 .........A............... GAATAAGCATTGTTAGGAAACACCAAAGATTGTAATAGATTATTCTTTCGAAGTTT 72408 25 96.0 40 A........................ GTAGGAGCAAGTGTAAAAATGGCACAGCAAGTAGCGATTT 72343 25 100.0 42 ......................... TGATTACTGACGAATTTAATTGTCACCATGTAATTTGCGTTT 72276 25 100.0 42 ......................... TCTAAATACAAGTTATACCCGACAAGGTTGGGACTCATGTTT 72209 25 100.0 40 ......................... AGAAACAGACACTTCAACTCGTTTAGTATGCCTTTCGTTA 72144 25 96.0 41 ...A..................... ATGAGATTAATTGTGTTGTACTCCCACATGCACCATGGTTA 72078 25 96.0 40 ...A..................... CAGCCTTAACGCTATCTATCGCATTACCCGTTAACGGTTT 72013 25 100.0 41 ......................... CTCGGGGGCTCTGCCAGACTTGCGATGAAAAAGAAACGTTT 71947 25 100.0 40 ......................... CAGTTCTGGCAATCCGTTACAGTGACTTCTCTGAAAGTTT 71882 25 96.0 40 ................A........ GATGAATGGATGTGAACGTATGGCAATGGGGAGTAGGTTT 71817 25 92.0 42 .....A..................A TAGACAAAGGAGCACAAATGATAGCCACGTACATGAAAGTTA 71750 25 92.0 41 ...A.....A............... TGTTTATTCTTTGGTTTTATCTTAGGAGGTTATCATGGTTA 71684 25 96.0 41 ...A..................... TAGAAGTTTCAAGTAATCCCTCGTCATTCAAGATAATGTTA 71618 25 88.0 41 ...A.....C...C........... GATAACAAATCCGCAAATTTATCTACTGTTATTTCTCGTTA 71552 25 96.0 41 ...A..................... GTGGATGCCTTGTACGTCTGATTGCCGGCAGTTGGAACTTA 71486 25 96.0 41 ...A..................... ACAATCCGCCCCGGTTTTCTGTTTCTTCTTTGGCTGCGTTT 71420 25 100.0 40 ......................... CAAATGGAGACGGTTGATGTTCGAGTCCGTTTATTAGTTT 71355 25 96.0 41 ...A..................... TTATGTAAGGATTGGGTGAGTGCTGCTAACTTTGCTAGTTT 71289 25 96.0 44 ...A..................... ATGAAACAAAAACTGAAATACGCCCTAATCATTCTCGCTAGTTT 71220 25 88.0 0 .....................T.TT | ========== ====== ====== ====== ========================= ======================================================== ================== 38 25 95.8 42 TATCTGAACGTAGTGGGATATAAAG # Left flank : GCGCAACGGATACTTAGGGATATTCAAGCGGAAATGGTGATCCCTAAAGCAATCTATGAGGAACAGCGTGAATTATTCAAACGGTTAGAAGAAGAAACAAACCCACAAGAACGGACCAGAATCAGAAGGACCATTGAAACCTATACGGTTTCTGTTCGTTCAACGGATAAAGTTACAGCTAAATTGGAACCTATTCAATGTTTTGGGAAAAGAAAAAACGGTACAACCTACCCATTATTGCCTTATTTATCTATCATTGATTTAGAATACAGCTTTGATGAGGAACAAAATAGCGGGATCGGTCTTATCCTACAGTAGCTTTTTTTGCAGTAGATCGGATTACATGAAATAAAGAGTGAATGGCTTGATATTACTGGCTGGAAGCCCGATTTTGAAAGCAATGTTGAAACATAACTGACGATTTACTGCAAATATCAGCTATCAATGATAAAATGGATGCAGGCAAATTAAGGGTTTTATTCGTTAAAACATAGGGGTTA # Right flank : GTAAAAAAAGTAGCCTTTAAACTCGGCTACTTCTACTACCCTTATATCTAATTAGAGGCATACCTAATTACATGTTTTCTACTTTCTCTGTCTTCCTGTCCTTTAAAATGTGTGCATACAAGCCGGTTGTTTTCGGGTCGCTGTGACCCAGCTGTTCCTGCAACCAAAGGAGGTCACGGTGTTCATCATAATTTCTCGTCGCAAAGCTGTGCCGCAGCTTGTGGACGGTCATTCCTGGTTTGCCATACGCCTTTGCATATTTCTCCATCATTCTCTGAATCGAGCGTGGGGCTATGCGCTCCAATCCCTTATCCCCGCGGTTCGCTGAAATAAACACTGGTTTAAAATTTTTCAAAACTCACGTGCTCTTTTAATATTATAAGTTAAGTTGTCTTTCATAATCCAGCGGTACCACGTTTTCTAACGACATCGTAATGTTTACGACAATAACCATTACCAACGTGAGGATTATTGCAACCATCGACGGTACATGTGCGTTT # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 81531-80388 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBWZ01000019.1 Aneurinibacillus tyrosinisolvens strain LL-002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 81530 29 100.0 36 ............................. TCGGCAATGTCAGCCCAAAGTCTCATACCCGTTTTC 81465 29 100.0 36 ............................. ACAATTAAATCATGTGCCGGGACAGTGCCGGGTGCC 81400 29 100.0 36 ............................. TCCACTTATTAAACTCTGTTGAATCGCATAAATGAC 81335 29 100.0 36 ............................. ACAGTAGACGGAGACATTATCGAGTGGTACAGGAGT 81270 29 93.1 38 C...A........................ GGCTTTGCCTTATCAATCGTTGCTTCTTTTACAGCATC 81203 29 100.0 36 ............................. TCAATCAGGATTGCCCTTCCTTTGACTCCGCCTAAA 81138 29 100.0 37 ............................. ATGGGGAAAGTTCATCCTCAATTGGACAATAGGTTGG 81072 29 100.0 38 ............................. GAAGCTTCTGGTCAATCATTCGAAAACCTTCTTGATTT 81005 29 100.0 38 ............................. CCGCAAAAAAGAACTGGAACAATGCCACAAAGAGCATC 80938 29 96.6 36 ..............C.............. TCAATATCCCTCATGTATGCTACTTTATACTCTAGT 80873 29 100.0 36 ............................. AGAGGTAAATTGTCCTTTGAATCCGTATGAATACTA 80808 29 96.6 38 .............A............... GTCAATGTCTCAGGAGTGCGGGAAAACATTGTGAATTA 80741 29 100.0 36 ............................. TATTTCCCGATAGAAAGAAAGTCATCGACGTTCTGC 80676 29 100.0 35 ............................. GTTATGCCATGTTGAATTGTTGTAATGGTAATTAT 80612 29 100.0 35 ............................. GTTGAATTGATGGGCATGAAAGGGAAAGAAGTTAA 80548 29 100.0 36 ............................. TGAACCAAGATAAATCCCTCCCCTGCATCTATTGTA 80483 29 100.0 38 ............................. CTGAATCAAAAAAACCAATAACGGGATTATTTGCGGTA 80416 29 86.2 0 .............A..AA..........T | ========== ====== ====== ====== ============================= ====================================== ================== 18 29 98.5 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : AATGGCTGCTTTTTTAAAGACTATATAAGTGAATCAATTTCATAATTACATACGATATCAATGAAAAAAGAGAACTCTCTATACCTGTACCAGTGGCAAATTCGAAAGATATTAAAAAAATAGTGTATGGAAGAGAAAAGCATGAAATCGATTTATTTCTCTAGCTGAATTACTTATAATAAAATTAAATAGTATTGATGGTTATTTGCAGTAGATCTATTTTTGGCAAAAATGCTTCAATGCCTTGATAATAAAGGGGTAACAGAGGTTTTTCGAAAGTTCTAAAAAACACGACTGCCGATGTACTGCAAAACACAAAAGATTGGCATATTACAAACCTTGTTAAATCAAGGTTTTGACAGCGTTAAAATAAG # Right flank : ATGAATTAGTCTCGGAAGAATTAATTCATACATTTTACATCAACGTAGCGGAAAAAGGTGCTCTATATTTATGGAGTGCCTCTTTTTGTTTATTTAAAAACATTTCCAACCAGCCATTTTTGTTGGTATTATTTTCTAGGTAAGCTGCATTATAAAAATAAACTAAAAGGAGGTGAGAACATGAAATTACGTTTAACCTTTAAAATCGACAAACTTCCTGTTTCTTATCGCCTTGGAATTCTATCCATTATTAAGGAGTGTATCCGGCGTTCTTCGGAAGATTTTTATACGAATTTCTTCGAGGTCAATAAAGCACAAATCAAGCCCTTTACTTTTTCAACATACTTTAAAAAAATGAGGATGGACGATGAATACATATATGCTGAACAGCTGGATGTAACTATCAGCAGCTCATCTTACGAGTTCATCATGCATCTATTCAACGGAAGTCAGGATGAAAAGACTTTTACCTATAGAGACTTCCAACTTAGATTAATCGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //