Array 1 3136653-3134366 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR133996.1 Shimwellia blattae strain NCTC10965 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3136652 29 100.0 32 ............................. TAAATTACGGATTTCTTTACATACAGAGATAC 3136591 29 100.0 32 ............................. ATGCTCTTTGATTTCCGGCATCTGGATCGCAA 3136530 29 96.6 32 ............................A TTTCCACATCACGACTAAATTTTTCTCTTTCC 3136469 29 100.0 32 ............................. GAATTGGTTTCCTGATACAGGATTCTCCATTT 3136408 29 100.0 32 ............................. TTTTCTATGGTTGCTTTCATCTCATTGATTTT 3136347 29 100.0 32 ............................. TTCACGCACCAATTTAATTTCAGCCTCAGAAC 3136286 29 100.0 32 ............................. CAACTGTGATATTATGTTTTCATTCCTAGCTT 3136225 29 100.0 32 ............................. GGGCTTTCGCCCCAATTGTTATTCTTCTTCTA 3136164 29 100.0 32 ............................. GTGATCACCATGGTCGGCGATGCGGTGCCGTC 3136103 29 100.0 32 ............................. CCTGTTTCAGTATGGTTTTATCACCATCATTT 3136042 29 100.0 32 ............................. AAATTTGCTAAGACTGTAAAACTGGTTAGCAA 3135981 29 100.0 32 ............................. AAAACACAATTGCAGTGACCAGTGCTGCTAAT 3135920 29 100.0 32 ............................. GTCCTTAACCGATTTAACGCGGCTGGGCAGGC 3135859 29 100.0 32 ............................. CGCTTCCAGATTGTTTTTCATATCAGGGAATT 3135798 29 100.0 33 ............................. CGCGTGGAGTCCAAGCATGACAACTGATATCAC 3135736 29 100.0 32 ............................. CAACGGCGGAGAACCACGCATAAATCCGGTGC 3135675 29 100.0 32 ............................. ATAGACAAGGCGATGATAAATATGATCGCCAG 3135614 29 100.0 32 ............................. TGATTGGGATATATCCTAATTCAGCAATTCTT 3135553 29 100.0 32 ............................. ATCGTTTAACTTCTCTTGCGGTGTCGTTTCCA 3135492 29 100.0 32 ............................. AGAATGAATCTCTGTTTATTGAGCGAGCAACC 3135431 29 100.0 32 ............................. TGGCAACGTTAATAGAACCTAATTTATCCAGG 3135370 29 93.1 32 ............T...............C TATGATATTAAGAAATTGGCCCTGGAATGTGC 3135309 29 100.0 32 ............................. CGTGGTTATTAAATTCACCGGCTGTGTTTGTT 3135248 29 100.0 32 ............................. GAAACAAAATGGCTTATCAAACAGGTAAAAAA 3135187 29 100.0 32 ............................. ATTATTGATATCGTTAACGCGGGCACGCTGTT 3135126 29 100.0 32 ............................. GTCACCATCAGCAGTAGAAAACATAATGGTGT 3135065 29 100.0 32 ............................. GTTCAGCAGTGCGAAGAATTTACGGTGAAATG 3135004 29 100.0 32 ............................. GTGGCGGCTTCTTTTGCCGTGATCGGTTCTTC 3134943 29 96.6 32 ............................C GATCACCCAAACCCATGGGTTAGCCTGCCAGC 3134882 29 100.0 32 ............................. TTAAACGAATATGTCCCCTCGTCATTCACCAG 3134821 29 100.0 32 ............................. TGCAACAACAGCACTAATAACCGCTACAGGAT 3134760 29 100.0 32 ............................. AAATAAAAAACATGAAGAGATTCTCTGCATAT 3134699 29 100.0 32 ............................. GTTTACCGCTATTCGTTTGATGTTGACTGGAT 3134638 29 100.0 32 ............................. CAGATGGTCCCGCCTATCGTTGTGGCCGTGGC 3134577 29 100.0 32 ............................. CTGAATGGCACAGTCGCGCCAGTAAACTGTTT 3134516 29 100.0 32 ............................. CAGCGCTTACAGGTTCATTCCCCGCGAGCATT 3134455 29 100.0 32 ............................. TGGCATATGGACACGGATGATCAGGTTTATAT 3134394 29 75.9 0 A........A.C..C.T........C..C | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGATCGAGGAGATTCTGGCTGCCGGGGAGATCCAGCCACCACCGCCGCCGGAAGATGCCCAGCCGGTGGCTATCCCATTACCGGTTTCCCTGGGGGATGCCGGGCACCGGAGTCACTAACGATGAGTATGCTGGTTGTGGTTACGGAAAATGTTCCGCCGCGTTTGCGCGGGCGGCTTGCTGTCTGGTTACTGGAGGTCCGGGCGGGTGTCTATGTGGGGGATGTGTCGGCACGTATCCGGGCAATGATATGGGAGCAGATCTCGGTACTGGCGGAGGGCGGAAGTGTGGTGATGGCCTGGGCGACAAATACCGAATCCGGGTTTGAGTTTCAGACTTACGGTGAGAACCGCCGTATTCCGGTAGATCTTGATGGTCTGCGACTGGTCTCTTTTCTGCCTGTTATAAATCAGTAAGTTAACGTTCTTTAATAATCTGGAGAATTTGGTAGAATCAGAAACGTTAAAAAAATGCAGTAAATTCAGTTGTCTATATTTAGA # Right flank : ATGTGCCTGGCCCTCCTGCAGCTGTTGCTGTCAGAAATATCCCCGTTAAATGTAATTGTATTGTTAAGTAAATGCCGAATTGATCACAATAATTAAACAATTTGCCCGTTTTATACGCATTATCCAAAAATGTAGATATTTTTAATTTATGGCTACGAAATGAACATCGCCTTGTCTCCCTGATTATCAACAGAGGATAGATCCTGATGAACGCACTGACTGCCGTAAAACCCGCTGTCCAGAGAACCACCGGATTTACCATTGCCCCGAGCGTGCAATCGCCCCGTCTGCTGGAGCTGACCTTTAGCGCTGAAACTGCCCGGCAGTTTCTGGAGCAGGTGGCACAGTGGCCAGTGCAGGCGCTGGAGTACAAATCTTTCCTGCGTTTCAAAGTGGCCCGCGTGCTCGACGATCTGTGCGCGGGGCAGCTTCAGCCGCTGCTGATTCACACCCTGCTAAACCGCGATGAAGGGGCGCTGCTGATTGGTGCTGAGGGCATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //