Array 1 1-756 **** Predicted by CRISPRDetect 2.4 *** >NZ_WESC01000040.1 Parvibaculum sedimenti strain HXT-9 HXT-9_scaffold40, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1 32 100.0 33 ................................ ACCTCATCGTCGATGAAGCCGATATGTGGGCAC 66 32 100.0 34 ................................ GCAATACCAGTGGACCCAGCTCGTTTCGCGCCGG 132 32 100.0 34 ................................ TTCTCATCGCTGCCGACCGAAACCTACGCCACCA 198 32 100.0 33 ................................ ATTGCAGCCGGGATCTGCAGATCGCCGCAGCAT 263 32 100.0 34 ................................ GCCGATGGCGAGCCGGTGCCGCCACAGGCGCCCA 329 32 100.0 33 ................................ CGAACCGCTGTGCGGGGCGTTCCTGTGGGGCTC 394 32 100.0 34 ................................ ATCCAGACAAATCTGAACCAGGCACGCCTCACGG 460 32 100.0 33 ................................ ACCCAGTAATAGGCGTTGATGACCAGCGCTGAG 525 32 100.0 36 ................................ GCCCGCATATGGGCCGTCGCCGTTCGCAGCGGCGGC 593 32 100.0 34 ................................ GTCCAGCGGTGGGCTTGAAGGTTTTGGATTGCCC 659 32 100.0 34 ................................ ACGAGCACGAGCTGCGACTGATCGAAGTAGGAAA 725 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 12 32 100.0 34 GTCGCCCCTCACGCGGGGGCGCGGATCGAAAC # Left flank : | # Right flank : ACCTCATCGTCGATGAAGCCGATATGTGGGCACGTCGCCCCTCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCGGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.00,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 146466-136770 **** Predicted by CRISPRDetect 2.4 *** >NZ_WESC01000002.1 Parvibaculum sedimenti strain HXT-9 HXT-9_scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 146465 32 100.0 33 ................................ CTGCCGATGGACGATAAGCCCGCAGGTGTTTCC 146400 32 100.0 36 ................................ GTTCTGGATGCCGGTCTGAACGTCCGCCGTGTCGGG 146332 32 100.0 35 ................................ CGTTCGGGCTTTCGTCGCTCTTCGGGCAGTCGTCC 146265 32 100.0 35 ................................ TCTGCTCTCGAGCGGCCTTGGGCTTCTCGGCGCTG 146198 32 100.0 34 ................................ CCTTTCCTTGCCGCGCGTTCCACTCTTTTCTCCG 146132 32 100.0 33 ................................ CGGCATTACCTCAGCCATGATGCACCCCCAGCC 146067 32 100.0 35 ................................ CGCCCGTCGTCATCATCGACCGATTGCAGCCTGAC 146000 32 100.0 35 ................................ AACCATGATACGAATGGGCCGCGCACACGTGGCTG 145933 32 100.0 34 ................................ CAGGTGCGCGGTGTGCGCCGGGAAGCCGTACCGG 145867 32 100.0 34 ................................ TCGCCCTCGACCACGATCACCTGACCATTGCCGG 145801 32 100.0 34 ................................ GACGCCGTCGGCCCCAAGGGCATGCCGTGGCTCG 145735 32 100.0 35 ................................ ATCGAGGCGCGGGCAGCAAAGGTGACGGCATGAGC 145668 32 100.0 34 ................................ ACGCGGACGCGGACGAAATCACTGTCCTCGCCCC 145602 32 100.0 34 ................................ CCCCGATCGGCGAGCCGTCATTCGTCGCGGCGGC 145536 32 100.0 33 ................................ GCATTGTTCTCCGCAAGCCGAGCAAGTGTTGTG 145471 32 100.0 34 ................................ CATGCAGGCGATCTCATCCGCCGCCCGCTCGCTA 145405 32 100.0 35 ................................ TCGTCCGACACGGTGAACGACGGGCTCTTTTCGTT 145338 32 100.0 34 ................................ CGGCAATCGAGAACGAGGGAACTATCATGAAAAG 145272 32 100.0 34 ................................ TTTTAAAAAGATATATATTATAAGGGGTTAGCGA 145206 32 100.0 33 ................................ AAGCCGATCTATCAGGTCCACCCCGAGGGCCTT 145141 32 100.0 34 ................................ ATCAGCACGAGCTTGGAAATGCGTCGCGCGTCGG 145075 32 100.0 34 ................................ TGACCCGAGCCCCATTCCCAGTAGACCTCGAGCC 145009 32 100.0 35 ................................ CCACCACCAACGTGAGCCGGGAGCCCCGCCCTGAG 144942 32 100.0 34 ................................ GCGACGGGCGAGAATGGCGGGGGCTATGCCCGTT 144876 32 100.0 34 ................................ TCGAGCCGTGACGAGCAGGTACATGGCGTAGAGC 144810 32 100.0 34 ................................ ACCGAAAACGAAACCAAGAACGTCGTGTTCTGCG 144744 32 100.0 37 ................................ GGGGGGTAAGATCGCCAAGGGCACCACAGGCGGACAA 144675 32 100.0 33 ................................ ATGCACTCGTTGATGATGGACTTGCGCGTGCAC 144610 32 100.0 34 ................................ CCCCGATCGGCGAGCCGTCATTCGTCGCGGCGGC 144544 32 100.0 33 ................................ CGAAACCATGAGCTGATACCGCTCGACATCGTG 144479 32 100.0 34 ................................ ATCCACTTGATGTTGCTGCGCACGCTTCGCGGCT 144413 32 100.0 35 ................................ GCAGCTCGACACGGTGCGGACCGCGACCGAGATTG 144346 32 100.0 34 ................................ CCGATCGCCGCCGGCGAGTACTACGTGGCCGTCG 144280 32 100.0 33 ................................ GCCTCATTCGCCGAGCGCATCATGCGCGGTGGC 144215 32 100.0 33 ................................ TTCGTCTTATCACCGATCTTGCGCACCTGCGCC 144150 32 100.0 35 ................................ CGCACTGTCGGTCGCGTTGTCGGTCGCGTTGTCGG 144083 32 100.0 37 ................................ GCTGTTCGGGTTGACGATCGGGGCCATGGTTGGAGCG 144014 32 100.0 34 ................................ ATCCGCGTTCGGAAACAGCGCGTCGATGCCCTTG 143948 32 100.0 33 ................................ CACACACCGAACGAACGCCAGTCACGGCCCTTG 143883 32 100.0 35 ................................ TTGAAGGGCCTAGCACCATCGATGGCGCGCAAGGG 143816 32 100.0 35 ................................ GCATATCGCTCGCCCTCGGCACCCACTGCGTCGAG 143749 32 100.0 35 ................................ ATCAGCACGAGCTTGGAAATGCGTCGCGCGTCGGC 143682 32 100.0 35 ................................ GTGCGCGATGCCTATAACGTCTCATTCCTGGAGGC 143615 32 100.0 34 ................................ CTCTTGCTCATTTCGCGCTCCCGAACATGTGGTT 143549 32 100.0 36 ................................ CCACGAGAGGCGTCCGCATATGTCCACGAGCCAATG 143481 32 100.0 35 ................................ CCACGAGAGGCGTCCGCATATGTCCACGAGCCAAT 143414 32 100.0 33 ................................ CGCGCAGAGATAGTGCCCGTCAGTCTGGCAGTC 143349 32 100.0 33 ................................ CTTGTCGTAGTAGCGGGCACGAACTTCCTTGTG 143284 32 100.0 34 ................................ AGCTTCCTACTGGCGGCGGCAAGACGGCCCTATC 143218 32 100.0 34 ................................ CCTGCCATCGGTACCGGCCGCCAGATGCGAAAGC 143152 32 100.0 35 ................................ ATCACGAAGCCCTTGAAGACCTCACGGACGCCCGG 143085 32 100.0 34 ................................ GGCGATGAGTACGTCGCTCGCACGGCCGAAGAAG 143019 32 100.0 34 ................................ TCCTGAGGCGCACGAGCGTGCCTCGCGGCGAGGT 142953 32 100.0 35 ................................ AGCGCACAGACTGGCGGATTTTATGACGAAGCACT 142886 32 100.0 35 ................................ GTCGTCAGCGTGATGCTCTTCTTTCCGCCTGCGAC 142819 32 100.0 34 ................................ ATCTCGAAGCCCTTGAAGACCTCACGGACGCCCG 142753 32 100.0 35 ................................ GATGATGACGCCGGCAAGCCGCTCATGCAGCTCCT 142686 32 100.0 34 ................................ CATGTCCACCGGCCCATGCCTCGTTGCCCCGGCT 142620 32 100.0 35 ................................ CGGGCGCTTCGCGCATCGCTGGCAAAAGCGGCAGA 142553 32 100.0 33 ................................ CGACAAGCTGGACCTGAACGTCTCGGGTGAGGT 142488 32 100.0 36 ................................ GCTGTTCTGGTTGACGATCGGGGCCATGGTTGGAGC 142420 32 100.0 34 ................................ GGCTCAGCCGTCAAGCGGGTCGTAGTCGTGGGTC 142354 32 100.0 35 ................................ ATCAGCACAAGCTTGGAAATGCGTCGCGCGTCGGC 142287 32 100.0 35 ................................ CCCGCCCCCGCTCAATGTCGGAAATATTTGCCGAG 142220 32 100.0 34 ................................ GCCTATCAACCCGCCGATAAAGCAAAATGGGCCA 142154 32 96.9 33 ......................A......... ATCAGCACAAGCTTGGAAATGCGTCGCGCGTCG 142089 32 100.0 34 ................................ CTGTGGTCGATCATGTCGCCCCGCATTTCCTCGC 142023 32 100.0 33 ................................ ATCCGCTGGCGCCCGAACGAAACTCACGTCTTG 141958 32 100.0 34 ................................ CCATGAGAGGCGTCCGCATATGTCCACGAGCCAA 141892 32 100.0 32 ................................ AGGACGCTTAGCTCGCTGCACTGATGGCTACG 141828 32 100.0 34 ................................ ACCAGCACAAGCTTGGAAATGCGTCGCGCGTCGG 141762 32 100.0 35 ................................ CCACGAGAGGCGTCCGCATATGTCCACGAGCCAAT 141695 32 100.0 35 ................................ AGCCTGACACGCGCCGTGGGCCAGCTTCTCGCGGC 141628 32 100.0 35 ................................ GGCGATGAGGTCGAGATAATACAGCGTCTTTTCGG 141561 32 100.0 35 ................................ TCTGGTCCAAAGGACAATGGGCTACCGAGTATCTG 141494 32 100.0 34 ................................ TTCGCCTCGTAAACGATCATTTCGAGGTTGGTCG 141428 32 100.0 34 ................................ GTGATCGTGGTGCGCCACCGGGCTCCGGCGGTGG 141362 32 100.0 35 ................................ ACCTCGAAGCAGCGGAAGGCACGCGGGTCTTCGCT 141295 32 100.0 35 ................................ CTCAAGTCGCTGGCACATGCGTTCTCTGTCGACCT 141228 32 100.0 35 ................................ CGAATAAGGCTGTGAAGCCGGTGCGCGCGGCGCAG 141161 32 100.0 34 ................................ GGCATACGTTCCAGCGAAACCGCCGGAAGACTTG 141095 32 100.0 35 ................................ ACTACTGAGGCGCAGCTTGCGGCTCAGATCGCCGT 141028 32 100.0 35 ................................ ACCGCCTACGGCGAAGTGATGAACCGTCGCACGGG 140961 32 100.0 32 ................................ TTCGCAAGGATCGCGCGCTTGCCTTGCACCTT 140897 32 100.0 35 ................................ TGTCCCCAGCGGGGCATCAAAAGCAGCGTGCGGCG 140830 32 100.0 34 ................................ TTCGTAGGAGGTCATTGAGATGCGCCCCACACCA 140764 32 100.0 34 ................................ TTCCAGACCCTCGCGCTGCGCGCGCGGCTCGCTG 140698 32 100.0 34 ................................ TTTCCGAAGCATGGCGCTTCGTGAGGCGGCGCAC 140632 32 100.0 34 ................................ TTGTCGGTGCTCGCCGACGTGATCGACCAGAAGG 140566 32 100.0 34 ................................ ATCAACAATAGGTATGCCCGCAACTACGCACAGG 140500 32 100.0 34 ................................ ACTGTTGAGGCGCAGCTTGCGGCTCAGATCGCCG 140434 32 100.0 33 ................................ GGGTGTACGCGCAACAATGACGCGCCAACCGGC 140369 32 100.0 32 ................................ TTCCACCTTTAGTTTTTCGAGGTCTGCCACAG 140305 32 100.0 34 ................................ CTCCACGAGCGCAGTCTCGTCGACGCGCTCGGTC 140239 32 100.0 35 ................................ ACCTTGAGGTCGGTAGCGGTCTTGACCTTGTGCGG 140172 32 100.0 36 ................................ GCCAAACTCGAAGAGGCGTATCTCGACGATAAGCGC 140104 32 100.0 33 ................................ GTGGCATTCGGAAAGGCCCGGCCGAAGCCGGGC 140039 32 100.0 34 ................................ CGGTAATTGATGCCACAGACGGGTATGAAGTGCT 139973 32 100.0 35 ................................ TCAATGGCACGCAGACGATGCGCGTCGACGAGGCT 139906 32 100.0 36 ................................ TCTGGCGCGCATCGTCACCTATCGCCGCAATGCGAG 139838 32 100.0 35 ................................ CACCATTCCCCCGGCTGCTGGTTGAGGCCGATGCG 139771 32 100.0 35 ................................ GGCAAAAAGAGTCACTCGGCTTCCGTTGCCCCAAT 139704 32 100.0 34 ................................ ACGGTACAAGTCCAGACCAATGTAGGCGGACTAG 139638 32 100.0 33 ................................ AGTCTGAACTGGTCAGGCGGATGGATTTGTATA 139573 32 100.0 35 ................................ CTGCTCGGCTTCGCGGGCGCGCTCCGGGTCAACCG 139506 32 100.0 34 ................................ CTGATCCTGCGGGCGGAGCGCGGTAGGCACGATG 139440 32 100.0 33 ................................ CTGCACCGAAAGCACCATCGGCGTATGGACGCG 139375 32 100.0 34 ................................ GCTATACCCGCGAGCTTTGGGGACCGACGCCGAC 139309 32 100.0 33 ................................ TGATGCTGACGTATCGCTCGACCAAGACCTACG 139244 32 100.0 34 ................................ GCCGAAGCAATCGACGACGCGGGCCTGCCGGAGG 139178 32 100.0 35 ................................ GCCGAAGCGATCGACGATGCGGGCCTGCCCGAGGA 139111 32 100.0 34 ................................ GTCCTCCAACGCAGGTTGGAAGACGAAAGACATG 139045 32 100.0 34 ................................ ATCCCAGATCGCCCGGCCGATTTCGTGCAACGTC 138979 32 100.0 34 ................................ CAGACGAAGAGGTCATAGACCTTGCTCGCCGCCG 138913 32 100.0 32 ................................ CTCGGACGGCTTCGGGACGGTCACTTTCGCTG 138849 32 100.0 33 ................................ GACACGTCGTCGCTGGACAAGCTGCTCGCCGCC 138784 32 100.0 34 ................................ TCGCCGAGCAGGCGAGCCATGTGCTCGCAGGACT 138718 32 100.0 35 ................................ GCCTCAAGCCACGTCTCGGCCGCGCCGAGCACATA 138651 32 100.0 33 ................................ CTTGGCGATGTCGTTGGCGTCGGCCGACGAGAC 138586 32 100.0 33 ................................ CGAGCAATATCACGTCCCCGACCTCGACCAATA 138521 32 100.0 34 ................................ TGCTGAAGCAGATAGACCGGGAACGTTCCGAAAG 138455 32 100.0 35 ................................ TCGGCATGATGGAGACCATCGTGCGGCGCGGGCGG 138388 32 100.0 34 ................................ ATGCGGAAGTATGGCGTCGACACGCTGGCCGCGA 138322 32 100.0 34 ................................ ACCGCCGAACCGATGTCCGAACCACGCGGCCAGG 138256 32 100.0 34 ................................ TCTTCCGGCCGAGCTAGTGCATGCCCTCCTGCCG 138190 32 100.0 35 ................................ AGCCAATCCGGTGACCAGGGCGGCGGTGCGGGATA 138123 32 100.0 33 ................................ CAATCAATACCGCAATTGCGGCTCAGGCATGGC 138058 32 100.0 34 ................................ AGCAAGGGCCTCAACGATTCCGCCGATGCCGATC 137992 32 100.0 33 ................................ ATCGTATATGATGATTTTTCTCTCAAAACGAGG 137927 32 100.0 34 ................................ TCCGCTCGTGCCGTACCATTCCGTCTTGCGGGTG 137861 32 100.0 34 ................................ CACACCAAGAGGATGGAACCAAAGATTCCGACGA 137795 32 100.0 34 ................................ CCATCCAGAGGATGGTTGTGAGCTTTGCATGCGT 137729 32 100.0 33 ................................ GATCCATGAGCGCCAGGCATCGCCGCTGATCTC 137664 32 100.0 35 ................................ TCTTGCACGTCCACGCCCGCAGTAACGAACAGCGC 137597 32 100.0 34 ................................ TTGAAGATCAGGCTGGCGGGCAGGCCGGCGTCTT 137531 32 100.0 34 ................................ GCGTCATCGTCGAGCTGGGGCAGGCGGTTCACGT 137465 32 100.0 34 ................................ ATCTTGGATAAATCGAGGGCAAAAATGGCCGATG 137399 32 100.0 34 ................................ ATCCGAAAGAAGTCGGAATAGGAGGCGGCGAGGG 137333 32 100.0 35 ................................ CTCGGTAATGACGACGCCCTCTTTGATTTCGTGAG 137266 32 100.0 34 ................................ AACGAAGCCTGCCAGAAGGCGGCTGAGGAAACGA 137200 32 100.0 35 ................................ TCCATGTACGCCGTCCAGGCTCCCGGGTCGAGCCA 137133 32 100.0 35 ................................ ATCACTGTCTACGCTATCGGCCGCCGGTACGCGCG 137066 32 100.0 34 ................................ TTTTCCTTGTCGTCGTCAATGTGCCGGGCAACGT 137000 32 100.0 34 ................................ TCCCAGCTAGGCTGATCCTCAGCCGACGCACCAA 136934 32 100.0 35 ................................ TGGTCACCAGACGCGGCGAGCTTGTCGCGGTCCTG 136867 32 100.0 34 ................................ GCGATCTTGTCCTCGACGAGCCACTCGAGCGCGC 136801 32 96.9 0 .....................T.......... | ========== ====== ====== ====== ================================ ===================================== ================== 147 32 100.0 34 GTCGCCCCTCACGCGGGGGCGCGGATCGAAAC # Left flank : TGCTTGTCACCTACGATGTCGCCACTTCGGAGGCGGGCGGGCCGGGCCGGCTGCGGGCTGTGGCCAAAGCCTGCCGCGATTTCGGTCAGCGCGTACAATATTCGGTGTTTGAGATCGAGGTGGATCCGGCGCAGTGGGCCATGCTGAAAGCACAGCTGGAAGCACTCATCAATCCGAAATCGGACAGCCTGCGCTACTACTATCTGGGTTCGAATTGGCGCCGTAAGGTGGAGCATGTTGGCGCCAGGCCGGCTCAGGATCTAGGGGGTACGCTGATCGTGTAGGCGTGAGGCGTGAGCAACTTGCGTCTCCCGATCGAGTCGGCGCGAACCCCAAGGGTGCCGGAGATTCCCGACAGGTTCGCACTGGCACCAGCTCTTTGAAATCGTGAGCAAATTCTGGATGGCAATGGAAGGAGGGCAGGCCTGCTGTTCACCTTTGGGCAGATTCGCGCTATCGGCGCTATTTTCTCAACTCTGTCATCAGGTTACAAATCTACC # Right flank : TCGCGCTTGCCGTCTCCGCTTGCGCAAGCTGGACCAGCTCCGGCGCACTCACGATATAGTGCTACAGCAGGCCCTGAACTAACATCCCAACCGGACCACTCAGTGAGGGATGGTCAGCGCAATATCGGAACCCAAGTTAAAATTTGATCTAGATTGTTCAGTGGGAACATCCCGCTGCGGATGATCCGTGTTGTCAACAATGACTTCCGTTGAGGGATCGCCTAGAAATTGACGGTCGAGATCGGATGGGCGAGCAAAACTCGCTACAGAGCGCCAATGTTCGATATGCGGCTGTAGCTCAGAGGTAGAGCATCTGGCTTCCATCCAGAGGGTCGAGGGTTCGAATCCCTCCAGCCGCTCCATCGTAGACGTGTGCCACCTAATCACCTGCTAAACGGGTTTAACCATCTGGATACGGTGCCCGGCAATGATGCAAAACGTTTTGATGCCGACCGCTGCAACCTATGCACAATCCGACGCAGAGTCGCTGTGATGAGACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCGGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //