Array 1 215748-217697 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVFD01000037.1 Moraxella catarrhalis strain 489_MCAT 153_284697_6475387_32_,...,34+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 215748 28 100.0 32 ............................ TGTTTAACACACCAGTGATACTGCCCCGTCTA 215808 28 100.0 32 ............................ TCTGGAGCTGCTGTCCAATCTGTTGCGATGTT 215868 28 100.0 32 ............................ AAAAAACCAGCAGTGATAGCAAAGCCAAAACA 215928 28 100.0 32 ............................ TGACCGTGTCAAGGTTTTAGTATCGGGCGATG 215988 28 100.0 32 ............................ GTCGGCTGATGATATTGGGGTGTATTTTTAGT 216048 28 100.0 32 ............................ AAAAACCCTGTGATGATTGGCGTTGAACAAAT 216108 28 100.0 32 ............................ GCTCCAGCTTTGGCGGCGGCGTTAATCAAATC 216168 28 100.0 33 ............................ CTGTGATTTTATCAGCTAAAACTTGCCCACGGA 216229 28 100.0 32 ............................ AACTTTCAATAAACTGCTGCCAGCTTTGATGC 216289 28 100.0 32 ............................ ACATCAGGTGATCAGGCAGTTTTGGCAAGACT 216349 28 100.0 32 ............................ TTGGTCAAACAAGGAGAAAAAAGATGAGTAAC 216409 28 100.0 32 ............................ AGCAAATACAGCCAAAAACCAAAGCCAAGATA 216469 28 100.0 32 ............................ GTCTTAAGCCGGCCACAACACCTAAAGCACCT 216529 28 100.0 32 ............................ ACCTTAATCAAACCAAAACTGATGACTATAGA 216589 28 100.0 31 ............................ GCGATGGGCGGTATTTGATGATGTATTTGAT 216648 28 100.0 32 ............................ ACCATCTACAAGACCATATATTTCACCCTCTG 216708 28 100.0 33 ............................ CGCTAAGAAATCATGGAACAATATTAAACGCAG 216769 28 100.0 32 ............................ TTGAACGCACGCTAACAACAAACAATCAAAGC 216829 28 100.0 32 ............................ AAAGTTACTTGTGTTTTAGTTTGGGCAAGATA 216889 28 100.0 32 ............................ AGACCAAATCCGCCATGCTTGTTTACTACCAC 216949 28 100.0 32 ............................ TTATCGTTTTTATGATGCAGTGACACGCTTTT 217009 28 100.0 32 ............................ TAAATGTTGCATTAATCAGACCAACAATAATA 217069 28 100.0 32 ............................ AAGCTAAAGAATTTAAAATCAAATGGCAACCC 217129 28 100.0 32 ............................ GATAAGCTGTACGGGCTAAGCGATACCACTGT 217189 28 100.0 32 ............................ GTTGTTAAGCTTTGATTAAGTGTGTTAATACT 217249 28 100.0 32 ............................ AAGCGTTAATAGCTTAAGCGAAAGCTTAGCAA 217309 28 100.0 33 ............................ AAAAAGAAAAACCGCCAGCACATGCCAGCGGTT 217370 28 96.4 32 ..................T......... ATATTGAAGCGTCTTAGATAAATCTCTAACTT 217430 28 100.0 32 ............................ TCATTATTATCGCCAAAACTCACCCAGTCAAA 217490 28 100.0 31 ............................ AAAAGTTCGGTAAAACTTTTAAGTTATCTGT 217549 28 100.0 33 ............................ AACCGCTTTAAATGCAACAGATAAGGCATCTGT 217610 28 100.0 32 ............................ TGGGGAAGTTAGGCATTTAAAATGGCAGGATA 217670 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 33 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGACGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //