Array 1 390374-389046 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIUC01000003.1 Algoriphagus formosus strain XAY3209 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================================================================== ================== 390373 37 100.0 34 ..................................... ATCACTCTCACGTTATCAATTTTCTAACAAAACA 390302 37 100.0 36 ..................................... AAGTCGTACTCCGTTCCAACGATTCCAACTGTAGGC 390229 37 100.0 35 ..................................... CACTTACGTATTTTTGTTACAACTTAATGTTTTTT 390157 37 100.0 36 ..................................... TATTTCGTTTTGTTCATTTACAGCCAGTCTGACTGG 390084 37 100.0 35 ..................................... AATTACCCCAAGGATCTTCTATTTTACCATTGTTT 390012 37 100.0 36 ..................................... AAGAGTTGAGTTGATTGCTCCGTCAACCACACGACC 389939 37 100.0 35 ..................................... GTCTGAAACATAATGGGTTACGCGTGGACTACCAA 389867 37 100.0 34 ..................................... TTGGGAACATTTTCTTTACGTCTGAACATATAAT 389796 37 100.0 34 ..................................... TTAAAATCATCAACCATTTTCATAGTTTGCTCAA 389725 37 100.0 35 ..................................... GGTATTATACCAACCAGAAAGATCTCCATTAGGCA 389653 37 100.0 35 ..................................... TCTTCTTCAAAAGAAGTACGAGAATATGATCTCTT 389581 37 100.0 36 ..................................... TCTCTAAGTCAGATTCTGTTACCCAAACGCATATGT 389508 37 100.0 35 ..................................... GTTGACTTGTAGATTGGAGCTTCAGCGTTAAACGC 389436 37 83.8 99 ..............................GGG.CGA GCGTTAAGAAACAGTCCAGTGGACTGGTTTAGCGAGTAGCCAGCTTGCAGGGTGGGCTAATCGTACATCTAGTATCTTTACGAAAACATCTGCACCCGC 389300 36 81.1 34 ...G.C.GG.A.G-....................... TTTCATATTCCTTTCATCAATCCAATTCATTGTT 389230 37 100.0 37 ..................................... AATTTCAGGTTCCAATGTGCAGGACGGCTGTGTACGG 389156 37 100.0 37 ..................................... TCTGGCAACCCCTGAAGTTCTGCTTTCTCCTCAATCT 389082 37 86.5 0 ..............................GG.C.GA | ========== ====== ====== ====== ===================================== =================================================================================================== ================== 18 37 97.3 39 CTCAGAGTACTGCATCCACTAAAACAAGGATTAAGAC # Left flank : TATGGCTATGCGGTCACCTGCCACAAAAGTCAAGGTGGAGAGTGGGAAAAAATCTATTTCTTTTTGCAAAAGGGCATGTATGTGATGAATCCTCCTTCGCTGACGCGATGGTGGTATACCGGCGTCACCCGAGCAAAAGAGAAGCTAGTACTCGCTCAGGATTGGTGGATAGGGTAAGCTACCCTTTGGGGTTTCCAAAAGCTCAGAAGTTTCAAAATCAAAGTATGATGCAAATTTCTAAACTTGTAAAAGTTAAGCTTCAATAGATTTTAAGAAAAAGGAATTGCAGTGCTCCAATCCGTCAAGGGTAAGAAAGAATGGGGTTGGAAACTAATCCGGGTCAAATCAAATTGAATAAAAGAAAACCTTTAAAACCATAAAAAAGAATTAAATTAGAATCAAACAAGAAGAAAATTGAGTTTTATTTTCGTAAAACTAAAGATATTATCCCGAGATTTTGATCATAAGTCATTGAGAAACAGTAAGAATTGGATCTAGGT # Right flank : GCGTTTAAAAATCTGCCCTTGGGCCGATTTTAGCGACGGGCCAGCTTGCAGGGAGGGCTAATGGTATATCTCGTATCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAGAGTACTGCATCCACTAAAACAAGGAGGACGGAGCGTTAAAAAATCTGCCCTTGGGCCGATTTTAGCGACGGGCCAGCTTGCAGGGAGGGCTAATGGTATATCTCGTATCTTAACGAAAACATCTGCACCCGCCACGGCGGGCAGGTCCACTAAAACAAGGATTAAGACTATATCCTACTACGAACTTAGGCAATATTAGTATATCTCAGAGTACTGCATCCACTAAAACAAGGATTAAGACCTACTACTTGAGCAGTCTTTGATGCATTTGCACTTACTCAGAGTACTGCATCCACTAAAACAAGGATTAAGACTTATGGTTGATCACCAAATAAGGGAAAGGATCTTTTCTCAGAGTACTGCATCCCCTAAAACA # Questionable array : NO Score: 2.80 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAGAGTACTGCATCCACTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //