Array 1 227880-225724 **** Predicted by CRISPRDetect 2.4 *** >NC_018108.1 Taylorella equigenitalis ATCC 35865, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 227879 32 100.0 34 ................................ ATTATCTATCCACCTTAACTTCAACCATTTCGGT 227813 32 100.0 35 ................................ TATACATTTTGCGAGACTATTTTAATTGTTAACTC 227746 32 100.0 34 ................................ GCTTGAATAGATTCGGGCTGTCTGATTAATTCTC 227680 32 100.0 34 ................................ GATGAGCTCATCAATCGATTTCACGGTCATCTAT 227614 32 100.0 35 ................................ TGCAAGTAATTCACACGCCTTAACTTTTATGACAT 227547 32 100.0 34 ................................ CTGAGATTAAAAACTTGTTAGTTGAAAATAATAT 227481 32 100.0 35 ................................ GGCTAATGTCGCGGAAATGCTAGCACCTGCTTGAT 227414 32 100.0 34 ................................ GGAACGTTCGAAACTACAGCATCAAGGGAACCCT 227348 32 100.0 34 ................................ CTGAGATTAAAAACTTGTTAGTTGAAAATAATAT 227282 32 100.0 35 ................................ GGCTAATGTCGCGGAAATGCTAGCACCTGCTTGAT 227215 32 100.0 35 ................................ ACGTGACAATATGAGCACGGTTGCTGATTGGTTCG 227148 32 100.0 36 ................................ AACAGAGTCCATTAGAGGATTTGCAGATGAATCAAG 227080 32 100.0 34 ................................ GACGAGAGTCTAACTAAGACACCAATCGCAAGGT 227014 32 100.0 34 ................................ CAAGATTCATTAACAGAGCTATTTCAGCTTACAA 226948 32 100.0 34 ................................ CCCGCTGGAAAACAGCTTATCAAGTATGGCTCGA 226882 32 100.0 34 ................................ ATGTCCAAGTAGACCTTAGTGCGACGGTCCATAA 226816 32 100.0 35 ................................ CGCAAATAATCGAATGGGTACACCGTAAAACTTGG 226749 32 100.0 35 ................................ TTAATTAAGTAAAAGGACAAAAAAAATGAATCAAG 226682 32 100.0 35 ................................ GAAGTTTCGACTGGATACGCTTGCAAATTAACAGA 226615 32 100.0 35 ................................ GAAGTTTCGACTGGATACGCTTGCAAATTAACAGA 226548 32 100.0 34 ................................ GAACGTCACCAACTTTACGATTGCTTAAAGGTCG 226482 32 100.0 35 ................................ CTATGGCAATTAATGCCACTTCATTTTTTATGCAA 226415 32 100.0 34 ................................ GATTGTGTAATCTCGTCCAACAATATACTTCATT 226349 32 100.0 34 ................................ TTTTCTCAATCATCGCTTGTGTAACCCCAAATTC 226283 32 100.0 34 ................................ GTAAAAAACATCGAATAGAAAAAGCACTAATTGG 226217 32 100.0 33 ................................ TCTGCCGAAACTATACGGTCACCACCGAACCAG 226152 32 100.0 34 ................................ TAACTGGAAGGACGGGTTGAATGGCACTTACTGA 226086 32 100.0 34 ................................ TTTTCTCAATCATCGCTTGTGTAACCCCAAATTC 226020 32 100.0 34 ................................ GTAAAAAACATCGAATAGAAAAAGCACTAATTGG 225954 32 100.0 33 ................................ TCTGCCGAAACTATACGGTCACCACCGAACCAG 225889 32 100.0 34 ................................ TAACTGGAAGGACGGGTTGAATGGCACTTACTGA 225823 32 100.0 36 ................................ TTCTAAACTACTTATTCGGAAGTAAACTTCAAAAGT 225755 32 87.5 0 ....T.....T...T..A.............. | ========== ====== ====== ====== ================================ ==================================== ================== 33 32 99.6 34 TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Left flank : ACAAGAATATCCTCCCTTCTTAATGAGGTAAACATGTTAGTACTTATTACTTATGATGTAGATATGAAAGACAATTCAGGTGCTAAAAGAATGAGAAAAATTTCGAATGCCTGTCAAAACTTCGGACTTAGAGTTCAATACTCGGTGTTTGAATGTGATATAGACCCAGAAAAGTGGATAAAATTAAAGAGTACTTTGCTTGATTTATACGCCCCTGAAAAGGATAGTTTGAGATTTTACAATTTGGGAAGTAAATGGCGGGGAAAGGTTGAGCATCACGGTGCAAAACCTTCGATAGATATTTTCAAGGATCCTTTAATTCTTTAACGCTAACCACTAGTTGACATTAGACTAAGATAAGATTAGCGATACTTTTGTTCTTTAAAAATCAAATAGTTTTTGAACTTTTGCTAAAGTTCTAATTTGAATCCTTATCACTTTAATAGCTTAGCGATTATAAGCTTTAAGAATAAGTACTAAAGCCATTTATAATGATGGCT # Right flank : GACAGATTAAGAAATGAGTTATAGTTGAATCTATAACTGTCAAGTCTACTTGTTTTAAAAGCTTAACTAGTATCCCATGTATCCATTCTCACATTAAATGCAATATACTCAACTAGCTTTGTTTTTAAGTATATTTATCAATACTGTTACAACACTAACAGGCAAAAATTCAAAGTAGCTTCTAAATCCTAAATCGATTTTAAAATCGAATTTTGTTTTACATAGAAAATCCTTATTTTTAATCACTTTCTGGAAATAAAATTTCTTTATTATTTATAAGTATTTTTTTCTATCGATTACTAAATTGAAATTGGGATTAACCTTTTATTTACCTAGGCTCTGGGTAAGTATTAAAATTAACCTCTTGCTTGCAAAAAAGTAAGTGTGTTTAAACAATTTTTAATTGACTTTAATCTGAGTCGTGCAGCCTTAGGGCTGCACATCCATTTTTAGGAAATCATATAAATGTTTATAGCACATACTCGGACTCTAGACTCTGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.90,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //