Array 1 1232237-1231903 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045179.1 Levilactobacillus zymae strain LZ395 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1232236 29 100.0 32 ............................. CATTGTTCGGTTCTTGGAATCCATCACCACTA 1232175 29 100.0 32 ............................. TACTTCATGCTTGCTCCTCCTCGTGAATCTAT 1232114 29 100.0 33 ............................. CAGATGGGGCCGCCGCCATTTTAGCAGGCGGCC 1232052 29 96.6 32 A............................ TGGCGTTCTAACTGGTGCGAACATCACGCAAG 1231991 29 100.0 32 ............................. TATACAAGTATAAAAGTCTAAACACTGCCGCC 1231930 28 82.8 0 A..........T....A.....-...A.. | ========== ====== ====== ====== ============================= ================================= ================== 6 29 96.6 32 GGTATTCCCCACACGTGTGGGGGTGATTC # Left flank : GTGAGTCCATTGTGATGGCTTCCTTTCATAAACGAGAAAAATTTAGTTACCGTAGCGTGTACTTTACTTTGGAAGGCCAAGAAGAGGATACCGACCGACCAGGGCTAGACCGAATTTTAGTATCGGTTCACTACGATACTGATGAAACACGGCAAGCTAGCCATGATTTCATGGAGTTCGCTGAGAGGACCTGTCCGGTAATGGATAACTTGACCAATGCCGTACCGATTACCCGCACGGAAGTCACTACAGAGACATCCAGTCGAGAAACCATTGAAAGCTAGAGCATGAATTAAAAAATGCCGTTTGATCGTCTTGATCAGCGGCATTTTTGATGGGACTAACATGAAAGGGGTAGCTTGACTGAGCTTAAAGCTATAGCTAAATTTGTAAGAGATGTAAATTGAGATGAGAATTGAAACCATGTAGAATAAAAATGAAAGTTAACGAAAAGTGAGTATTTTATAATCTATAAACACTGCTACAAAGGGATTCGTTTA # Right flank : CATAAAAAACACCTATGACATGCCACTAAATCGGCAGTTCATAGGTGTTTTTATCGGTCTCATTGCGGCCAAGCCTGACTCATCATCTCGAGTACCGGCGCTACCCGTACCCGTTCTGTCTTCAAATAACTCCCGTAAATCGGCATCTGCGCGATGTCGTCACTGATGGGGATGCGGACGCGGTTATCGTCTTGGCTGACCGTCGGGGCGTTGGGGTCTAGGGGCGAAAGATTCGTACTGAAGTAGGGAAAGTCGGCGTATTTGGTAATCTTGGTAAAGGCGTCACGCTGGGCTTGGTACATGAACTGCGCATCGGGAATTTGATCCTGGATAATGTCGCGCCAGATTCCAATGTCTTGGAGGACCAGGAAACTCAGGCCGCGTAATTCTTTAAATTGGATCGTGGGTTGGTTGGCGTGGTACATGAATTGATCCAGGTTAACCGCTAGGCGTTCGATGCCCAAGTAGCGCGATTCCACGGTGTTCGTCAGGAGTTCTTG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTATTCCCCACACGTGTGGGGGTGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.60,-11.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 1355634-1355236 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045179.1 Levilactobacillus zymae strain LZ395 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1355633 29 100.0 32 ............................. TTCCGGCCAGTGCCTTACCACGCAGCATCATG 1355572 29 96.6 32 ............................C GGTGCATATCGACCAGTGTTCTGATCCACATA 1355511 29 100.0 32 ............................. CAGGGATAGGCGTCCGCCCTTAGTTGCGACAG 1355450 29 93.1 34 ...C........................C GAACGTGTATTGGGTGACGCGGGCGCTCCTGCTA 1355387 29 100.0 32 ............................. GAGGAGCTGACACCGGCTTATCTCGTTCAGAA 1355326 29 93.1 32 .....................A......C CAGCTCGGCGCCAGATGCTATCTGGCTAACTG G [1355312] 1355264 29 72.4 0 .....T.......C......CA.C.AAA. | ========== ====== ====== ====== ============================= ================================== ================== 7 29 93.6 32 GTATTCCCCACACGTGTGGGGGTGATTCT # Left flank : CCTTTGGCGAAACGCCGCGTACTGGTTGCATTCCGAAGACACGGACCGGCTTCACGCTGAGAGTAACCTGATTGAACGGCAAACGGCGAAGGCGGCCATTAAGACCTTGTCGCAGTATCTGTCACGCACGGACGTGGACGAAACGCAGTTCGATAACCAGGCGATTTATCACCTGATTGTCCACTACCGTAACCGGATCGAGCGGGCCAAGGCGGCCGCCGCACCGTCACACGAAGAGGAGTACCAACACCAATTCAATAAATTGCGGGTCCGGGCGTTGAGCGCCGAACGGACGGGAATTCAGAACTTGCTTGAGGCGGGCAACATTTCCTGGGCCATGGCGTCGCGCTTACGGCAATACGTCAACTATGCGGAAAATGTGTTGGTCATGTCCTTGAGTAGTGACGAGGGCGATTAACGGGTTGAACCACCGTCGGCAAGTTAATAAAAAACGGCGATTGGTGCAATCCTAAACGTTGTTAAACCGGGATTCGTTTAGT # Right flank : AGCACCAAAAAAGAAGCCATCAGCGAAATTATTCGTTGGTGGCTTCTTCGTTTGTCATTTAAATGGTGGTGGGTTTCTGTGCGGTCATAATCAGATGTAAGATCCAATAACAGAAGAGCTGGATGAACGTCATCAGAATCACGAATATCCATAAATCATTCGTCCACATGTTCATTAAGGGCCTGATGAATTGTTCCGGATTTAAGAACAGGTAGATGGTATGGATGCGGAGGAAGCGGCCGATGTAGACCCCGACCGACGATAGGAAGGTCAACGTCAAAACCACGAATAACCGGACGATGTTGTTTCCACGAGCCAGCCGCTCCGAGATGCTTTGACTCACAAAGTTGAGACTCCAGAAGCCCAGGAACGCACAGAACAGGGCGCTGGTAATCAGGTAAGTAAAGTAGATCCAGATGTGAGGCGTGACCCGCAACAGCCCGCTGACCGCGTACGGCTGAAGTAGCGATAAGTGGAACAGGTCGGTCAACAGGTACGGG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACACGTGTGGGGGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1752617-1750271 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045179.1 Levilactobacillus zymae strain LZ395 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1752616 29 100.0 32 ............................. ATTTCGCTGGTTTGGCCCCGTGTTGGTTCTCG 1752555 29 96.6 32 ............................C GTGCTGAATTGGTGGCTAGATCCACGTATTTT 1752494 29 100.0 32 ............................. GCTCTTGGCGTTTCTGTAGATTACTTGTTGGG 1752433 29 96.6 32 ............................C CGTTTCAATGGCCTTGATTAAGGCCTCTCCCT 1752372 29 100.0 32 ............................. AAACAACTCATGCAACACGTCCTGGTCAGCCC 1752311 29 100.0 32 ............................. AGGTCAGTTGGCTGTGCGTTAGTGACGCTGAA 1752250 29 100.0 32 ............................. AAGATGCTCATCTTTAAGCCTTTGAAGATAAT 1752189 29 100.0 32 ............................. CAAACCCCTAAGTGGGCGAACGACAAGGATTC 1752128 29 100.0 32 ............................. AACTGTACAAAAAAAGAGCCACCCACCTCGGT 1752067 29 96.6 32 ............................C GCTGGTAGTAGTCTTGGTAAAGTCGCTTGGTA 1752006 29 96.6 32 ............................C ATGAGTCGTATACATCGGTTTGCCAGTATCTG 1751945 29 100.0 32 ............................. TTATTGGCTTTGACGTCCGCCATGTCCTTCAT 1751884 29 100.0 32 ............................. GAAGGCGTCAAAAAGCAGCTAGTAGAATTGAA 1751823 29 96.6 32 ............................C GAATTAGCAATCGTTTCACCTTCTATCAAAGT 1751762 29 100.0 32 ............................. TTATCGGGACATGAATAAGTCGCATTGGCGGC 1751701 27 93.1 31 ........-............-....... GATGTGGTTTCGCGCAATCGGCTGTATGCAT 1751643 28 96.6 31 .................-........... AATGATGACGAAATCTCGATATGCGAAATGT 1751584 28 93.1 32 ........-...................C TTTCTGTCATGATTTTTGTAAATCGACTTGGA 1751524 29 96.6 32 ............................C GGCTTATACCCACTAGATTGAATTTTCTCACC 1751463 29 100.0 32 ............................. TCGAAATGTTGATGGCATCGCGCCCCGAAATC 1751402 29 96.6 32 ............................C AGAAGCAATTATGGGTGAATTTGGTGCGAAAG 1751341 29 100.0 32 ............................. CACCCCGCCGAACGCCAAGGTAACTATTGAAC 1751280 29 100.0 32 ............................. AATACATCACTTTAGGTGATATTTCAATCACT 1751219 29 96.6 32 ............................C AGAATGCTGTGAAGCGCGTGTGCCAGTCCAAC 1751158 29 100.0 32 ............................. AATTAACCTCTCTTTATTAGGATTGATAGAAG 1751097 29 96.6 32 ............................C CGTTGATATGACGGGCAGGGCCTTTTTGCATT 1751036 29 100.0 32 ............................. AAATTCCGGCGTAAGAGTTCCGGCGGCCAAGG 1750975 29 100.0 32 ............................. AGGAGGAAACATTATGAATTTTGGTAAAGCGC 1750914 29 96.6 32 ............................C CGGGGACTACACGGCAGTCAGCCACGGGGTGT 1750853 29 96.6 32 ............................C TCCAAGACCAGTACACCACGGTAAAGGGTTTG 1750792 29 100.0 33 ............................. CGCCACGGTGAGCAATTGCGGAGTACCTTCTCG 1750730 29 100.0 32 ............................. ACCGAATCACGCAGCTCGCCGCAGCGGTCACG 1750669 29 100.0 32 ............................. CTTTGCCACTGATCAGAATGGCAAGGAAATCT 1750608 29 96.6 32 ............................C GACTTTTGAATAATTACTTCTCTCATGATAGC 1750547 29 96.6 32 ............................C GGATTCGCTGATTATAGACCCGCTTCATTGTC 1750486 29 96.6 32 ............................C CAAATGCAAAGCTTCCCATTAACCACGCTAAA 1750425 29 100.0 32 ............................. GGCAACTTCCGGTTCTCCCGGAACTTCACCAA 1750364 29 96.6 33 ............................C TCCGACCACCGGCTAGCCGGCAACGTATACTTT 1750302 29 89.7 0 .......................A...GA | TCC [1750276] ========== ====== ====== ====== ============================= ================================= ================== 39 29 98.0 32 GTATTCCCCACATGTGTGGGGGTGATTCT # Left flank : GAAGATCTACCCGGTTTACAACAACGTCTTTAACGATTCGGCCTTAGCCAAGCAAAAGGGCACCACGGCCGACATCAGTGACCGGCGGGTAACCATCACCCACCGGGCCTACCGGATCGATTCCAACGGTCACCAGACGGTTTATTACCAGATGGAAAACGGACTGTGGACGCGGGCCAGTGCGTTTGATTTGAATAGCTAATATAAAGCGATTGAGCCGCTATAAACTGCGACTCTAAATCATGATTAGGTGTCGTTGGTGTTGAGCCAGCGACACCTTTTTGTCGTGGTGATTAGGATTAAAAAATAGGCTAAGTGGCTGGGCGCTTGATGGTCAAAATTAATGCGACTTAAACCGAGATTATGCTGTAGATGGATTTATTGAAATCGTTAACAACTATTGATAAAATAAGTACCGGAATCATATATATTAAAAGCAAGTTAATGAAAATACGTAACTAGTTCGTTTTCAAATGGCTTGATGCCGGGATTTGTTTAGT # Right flank : AAAAATGGCTTCTTGTCAATCGGTGTTGATGAGGACTATTATGAGGATCCAATTCATTTACGAATTGGATTTTTTTGACTTTGATTTTAACGGCGTTCTCCTCAAGATTTGATTCTTTGGTCCCAACTTGATATTGATCAATTTTAAACCGGGGTTTTACCGGTATACTAGGTTTTGTCACCACGGCGGAAACGAAGGGGTGAGGCAAGTCATTGGCGGACTGGCTTTCAATTGAGCGCATCTTCAAGAAAACTTCACGTTTCCGGCAAAAAGTCCTCTGATTCGCCTGCTAAAGTGGGGGTATAGCCTTGAGAAACCCGATTTTTTCAATTAAAAATTGAGAAAAGGTTAAAAGGTCAGTAAGTTAAGACTAATGGGTTTCATCATTGCCGATTGTGGTGTACAATTATTAACATAAATTAGCACTCAAACAGAAGAGTGCTAAAATCTCAGGTACCTCATCGACAAGCACATCATTGGAGGGCGATTCTATGATTAAA # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACATGTGTGGGGGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 1942521-1941231 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045179.1 Levilactobacillus zymae strain LZ395 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1942520 36 100.0 30 .................................... GACGCCGACACCATTAGCGCCATTCAAGCC 1942454 36 100.0 30 .................................... AATCCGGTAAGAACATGGCCCGCCCGCAAT 1942388 36 100.0 30 .................................... AAGGACGACCAACCCGACGACGCGGCCATC 1942322 36 100.0 30 .................................... AACTGGTTCTCGCGGCCGTAAGTGCCAGTT 1942256 36 100.0 30 .................................... GGCCACCGTGGCCCGCGGGGCGGTAAGGCC 1942190 36 100.0 30 .................................... CAATTTCACCGATAGCCAAAACCCACACTA 1942124 36 100.0 30 .................................... AATGTCGGGATGTTCCTTGCACCACACGGC 1942058 36 100.0 30 .................................... GGGCCTATGCCAGTCAGTCCGGCACGTCTA 1941992 36 100.0 30 .................................... TTTGCGGAGTATCGCTATAGCGGCAAGTAC 1941926 36 100.0 30 .................................... GTCTTCGTCGTCCATGATGTCCAGGGCGGT 1941860 36 100.0 30 .................................... GGTCGGTGGCGTCATTGGCGATGACCTTAG 1941794 36 100.0 30 .................................... GATCGTGATTTCCCAGTCTTCCAGCGGGTT 1941728 36 100.0 30 .................................... ATGAAGATGATCGGCACGGTCAGGCCACCA 1941662 36 100.0 30 .................................... GCCGGGGACCCGTCCACGCTACAGCCTGAG 1941596 36 100.0 30 .................................... AGCGATTGAACCTAGCTATTCGGGTCTCAA 1941530 36 100.0 30 .................................... GTCACGGCCAAGTGTAACCGGCCGGTGTCC 1941464 36 100.0 30 .................................... ATGACAACAACGACCATTGCCGTCGGTAAC 1941398 36 100.0 30 .................................... GTACGAGCCCCCACTGGGTGACGAACTCGT 1941332 36 97.2 30 A................................... GTAAAACCGCGCCCCTTGCAAGGCGCGCCC 1941266 36 72.2 0 .C.....................A.TA..T.CGCAT | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 98.5 30 GTTTTAGATGAGTGGTAAATCTAGAAGGTCAAAAGC # Left flank : GAGTTGGATTTAAATGCGGTATTTCAACGGAAACTGCAGGTACAGTTGTTGAAAGTCTTGTCTGACCAGCAGACGGTTCAATTGACGGATCAAGTTCAACAATTATTGACACAAATTCTGGGGGATAGTTATGTTTTGGATGTGCCGTTGGGGATTCCGGAGACGCCCGAACTAGCAAAATTAATGAAATTCAGTGGTCTCAAGATTGACGGCATAGCCGATATGGGGATTCATGGTATACTGGAAACGTTAATTAAGGTATTAGTTGAATTAAACGATCGGCACACGGTCGTGTTGACCAATGTTAGCCACTACTTACAGGTCGCTCAATTTAAATTATTGAGTAAAGCGGTGGCGGACGCAGGTTTACCACTCCTTATCATTGAATTCTCAGAAATCCGCCGTCAGCAAGTATTTGAAGATTGTGACTATCACTACATCGATAGTGACTTTGTTCTCTGGTAGCTGATTTAGTATGAGAGAAGCATTATAGAACAATG # Right flank : CAATCACAAAGTCTTAAAGTAGTTCTAACTCTAGACCAAACGAAAGTCCCGCACTTCAAAATCGGTGCGGGACTTTCGTTTGCTCTAAAAATCTAACTCGGTTGATACGCCTGCGCCACCTCTTCGGCCGTGGGGTAGGACTTCTGCGTCCCACGCCGGGTGACCGTTAACGCCGCGTAAGCGTTGGCGTGGTGCAGCGCGGTCGGCACGTCCTCGCCCTGGGCGAAGTAGTGAGCGAATGACCCGATAAACGAGTCGCCAGCCCCGGTAGTGTCCACCGCCTGGACCTTGACGGCGTCGATCAGTTGGCAGTCGTTGGCGCAGACCCACAGCACCCCCTTGGCACCCAACGTGACCAGCAAGTTTTTGACACCCAGGTCAATTAGATGGTGGGCGGCGGCCTTAATTTCGGTCAGGGTCGTGGTCGGCATGCCGGTCAGCGTCGCAAGTTCCGTTTCGTTCGGCGAGAAGAAGTCGACCCGACTGACGTGCGCCAAATC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGAGTGGTAAATCTAGAAGGTCAAAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 5 2687283-2687618 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045179.1 Levilactobacillus zymae strain LZ395 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2687283 29 100.0 32 ............................. GTATCGTCGATACGCTAGCTGTCCTGGTGTCA 2687344 29 100.0 32 ............................. GACCGGGGACCAAACGGACTATGCTAGGGCAA 2687405 29 100.0 32 ............................. CCCAGTGTCTTTAAAAATCTGTTTTGCGGAGA 2687466 29 96.6 32 ............................T TGTACCTACTTGACGTTTTATTTTCAACCAGA 2687527 29 86.2 33 .............A..........GAC.. TTATCATTGGTCTATGTTTGTTGTACATGGCTT 2687589 29 89.7 0 A.......T...................T | A [2687607] ========== ====== ====== ====== ============================= ================================= ================== 6 29 95.4 32 GTATTCCCCACACGTGTGGGGGTGATTCC # Left flank : TCGGCTTTTTCGTTGCCTTCCTGCCGCGATTCATTCCGCTGATGCTGTTTACCAAGCGTGAGATTCCAGAGTGGTTTAACGAATGGATGAAGTTTGTCCCCGTGTCGCTTTTCACGGCTCTGGTAGTCAAAGATGTGTTTATCGACAGTAAAAGTTACCAGCTGATGTTCACCCAGGTGCCAGAAATGTTGGCCGCGGTGATCGTCATCATCATCGCGTACCGCACGCGCTCAATGGCGCTTTCCGTGATTACGGGACTGATTGGCGTGTTTCTGCTGTCGATGGTGATATAAATAAATTTAGTAAATCCGTTATATCGGCATCATCCACTCTCCTGAGAGAAGTGGGTGATGCCTTTTTTTATTAAAAATGTAATTAATGGGGTATTCGTATCTTTGATTGAAAATAGAGCGCATTGCAGGTACAATTAATGAAAACAAGTTAATGCAAAACTGCAATAGACGAGATTCAAAATGCTGCTATGACGGCTTTTGTTTAGT # Right flank : TCATTGATTGCATTAGCTGAAATTATTATCGGTCTGTGTCTGCTGTATATGGCCTTTTCTGTACTAACTGGTCATTAAAAAGCTTACCCACTACGCTGATCAGACGTAGTGGGTAAGCTTTTTTATGATGTTACGGTCCGCGGCCGCAACTAGTTTATCGAGTTAGTCAGTTACTTTATCCGTTTCGGCGTACATGTAGTCCCGCGTCATCGGTAACATCCGGGCGGAAGGCCCCTTGGAAATCAAGTATTGAATTACGTCGATGTTACCGGACTTGAAGGATGCTGCACAGGCCTGTAAGTACAGGTCCCACATGCGGACAAACTTGTCGTCGAACATCTTGGCGACTTCTTCGCGGTGTTGATTGAAGTTTTGATCCCAGATTTCCACGGTCTTTTGGTAGTGTCGGCGCAGGGGTTCCATATCATCGATTTGTAAGCCGTTTTCGATGATGTGGGTCGTGTTTTCCACCAGACCAGGCACGTAGCCACCGGGGAAAA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACACGTGTGGGGGTGATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //