Array 1 3650935-3649686 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059003.1 Escherichia coli strain 2D chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3650934 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 3650873 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 3650812 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 3650751 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 3650690 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 3650629 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 3650568 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 3650507 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 3650446 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 3650385 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 3650324 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 3650263 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 3650202 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 3650141 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 3650080 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 3650019 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 3649958 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 3649897 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 3649836 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 3649775 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 3649714 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //