Array 1 1626079-1627486 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040449.1 Aeromonas simiae strain A6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1626079 28 100.0 32 ............................ AGCAGTAGCGGCGATACCGTCGCCTTTATCCA 1626139 28 100.0 32 ............................ TCCCCGGCAGTCCCCATCACCTTGTCCACCTT 1626199 28 100.0 32 ............................ TCGTCCAGCACCAGCAGGTCATAGTCGATGAG 1626259 28 100.0 32 ............................ AGAACGAGCAAAATAAAGGCCGCGCAATGCGG 1626319 28 100.0 32 ............................ AGCATCATGGCAGCCATCAAGGCGGATCCGGA 1626379 28 100.0 32 ............................ GTGGCACCAGCAGCACCATGCTTCCGCTCTAC 1626439 28 100.0 32 ............................ AGAAACGGTACGAACAATGTCACCATCACGCT 1626499 28 100.0 32 ............................ GCCCTGCGCACCGCCCGCGTCCAGCAGTTGGC 1626559 28 100.0 32 ............................ CTGACTACCTTCACTTTGGTCAATATGCAGGT 1626619 28 100.0 32 ............................ ATGAGCCGGGAAGGAGATGGAAAATATCGGTT 1626679 28 100.0 32 ............................ TCACGGGATGCGGTCACATATACCGGGCTGAA 1626739 28 100.0 32 ............................ TTTTGATCTTGCGCCGAGCGCTGAAAATTTGC 1626799 28 100.0 32 ............................ ATAAGCGTCGTAAAACCGAAGCCAAACAGGAA 1626859 28 100.0 32 ............................ TTGGAATCCCTACAGAATCAGCGTGGAGCATG 1626919 28 100.0 32 ............................ AGTTATGGCAGCCATCACCTGGTCTGGTGTTG 1626979 28 100.0 32 ............................ ATAGTGATTGCAGACGGCATCCAATGATGCTG 1627039 28 100.0 32 ............................ AACGAGCAGGCTGTGCTGGAGCATAATGACTT 1627099 28 100.0 32 ............................ AGAAACGGTACGAACAATGTCACCATCACGCT 1627159 28 100.0 32 ............................ GCGCCGGTCGCGGTATGGATAGCCTAAAGAAA 1627219 28 100.0 32 ............................ TGCTCGTTCATTTCGGCGACGTGTCCCAGCCA 1627279 28 100.0 32 ............................ CTCGCCAACCCGATACAGAGACCCCGGATTGA 1627339 28 100.0 32 ............................ CCCAAGGGGGCCCCGTCACAATTAGCATCACC 1627399 28 100.0 32 ............................ GGTAAGCGCGCCCAGTTGCTGCGTTTTGGTGG 1627459 28 92.9 0 ......................A.A... | ========== ====== ====== ====== ============================ ================================ ================== 24 28 99.7 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : TGGCCGATCTGCTTAACCTCACCGAGGTGAACTGGTTACAAGGGATGCGGGACTATATCCATATCGGCGAACCGGCCCAGGTGCCTGCCACCGCGCGCTTTCGCGTTGTGCGGCGGGTTCAAGCCAAGAGCGCCCATAACAAGCGCCGCCGCTCGGTGGCCAAGGGGTGGCTGAGCGAAGAGGAGGCGTTGACTCGTATTCCCGATACGCAGCAGAAGGCGATGTCACTGCCCTATGCCGAGATGCACAGCCTCTCGACCCAAAGCCGGATGCGCCTTTATATCGAACACGGCCCCTTGCTAGACAAGCCGGTGGTAGGGACGTTTAACGCATACGGGTTGAGTGCCACCACCACCATTCCCTGGTTCTGACCCTTTTTTTAAGGGCGTAGCTAACTCATTGATTTTTCAATGACCGTTACGCCCCGATAAAAATAGGGTTTAGCGGCAAGTTTGGGGTAAGTTCTTTAACAATCAGTGAGATAGCACTAATATGTAACA # Right flank : ATAAGAGACGTACCGACATCTGGCATGATCGCCATGTGATAGACAAAGAAAAAGCCCAAGCAATTGAATTGCTTGGGCTTATCATTTGGCGGTGAGGGAGGGATTCGAACCCTCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGGTTGTTGTTAACGTGGGCAAACTCCACGGTGCCGCGCTGTGCGTCGGAACGGGGCGTAATTTAGGGGAAAGGTGCGCGGTGGTCAACACTTTTTCCCCTTATTTTTCATGCTGTTTTTCATTTGCTCATGGGGTGAGCAGCGGTTGGCGCTTTTCTCGCCTCACGGCTGATCCAGCACCACCAAATCGTCGGAAAGCTCGTTGCGCTCATGGGTGGGGGGGAAGACATCCGCCAGGATCTCGCCGGTACGCTGCACGCACTCGACGAAGCCCTCTTCCACCTTGCCGCGCCGCACCTGCTCGACAAAGTCGTCGATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //