Array 1 2297374-2293437 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063212.1 Trueperella pecoris strain 19OD0592 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2297373 29 100.0 33 ............................. GATGTTGTTAAAGGGAACTTTTTTGACGCGGCG 2297311 29 100.0 32 ............................. ATGCAAAGCCTTTCTGGACGTCGAAAACTGTT 2297250 29 100.0 32 ............................. GAGAAAGGCTTGAACGGCGTGGCCGGGGGAGG 2297189 29 100.0 32 ............................. ATACAATTCTTGAAAGCCAGAAGCAATTTTGG 2297128 29 100.0 32 ............................. CGGAGAGTCGCCCCAATTCTTTTCTGTTCCAC 2297067 29 96.6 32 ............................T AGCATTAAGGGGGGTTTAGTACCGTAAAAACC 2297006 29 100.0 32 ............................. TTTTCCAATGATGGCCATGCCGAGGAAGCGTT 2296945 29 100.0 32 ............................. GCTGGGGTTTGGTTCGGATACGGTGCCAGTGC 2296884 29 100.0 32 ............................. TGTAAGGATTCGTAAAGATGACCACCTACACA 2296823 29 100.0 32 ............................. GCATTCGCTCGCTCGAAGCCAACTCTAATTCG 2296762 29 100.0 32 ............................. AAATTCCCCATGCTCCCCGCCGACGAGCTGGC 2296701 29 100.0 32 ............................. GAAACGACGATGCTGGAGGCGGATTTCCGCAC 2296640 29 96.6 32 ............................T GGCAAAGAGCGCATCGTCGCTCGAGGCTTGGC 2296579 29 100.0 32 ............................. TTGATCATCGAGCTACCTTCTGCGGAAATCGC 2296518 29 100.0 32 ............................. CGCTTGCCGAAACCGCCACCGAGGGCTACGCT 2296457 29 100.0 32 ............................. CCTCCACTGGCGCACCTGCCCAGATTGCGCAA 2296396 29 100.0 32 ............................. TCGCCAAGCTCATCGAGGAAGGCCTGCCAGCG 2296335 29 100.0 32 ............................. AGGTTAGCGCCCCACAGGTTAGCGCCCTGCAG 2296274 29 100.0 32 ............................. TGATGTACGGGACCTTCATGCCCGTGCCGTAC 2296213 29 100.0 32 ............................. GGCGGATCAGGTGATCGCGATCTGCCGCGCAT 2296152 29 100.0 32 ............................. ACATGGGGGTGCCGTGACCATCAGCGAGCTAA 2296091 29 100.0 32 ............................. GCGTGGGACGACGGCGTTTCCATCCTCGAGGA 2296030 29 100.0 32 ............................. TGCTGGGCGTTATAGGCGTTGGCCTGCTCAGC 2295969 29 100.0 32 ............................. GCCACACGCCAACTCGCCCAAGCCCTCGGCCA 2295908 29 100.0 32 ............................. AGATGGCCATAGTACTGGAACTCCCCATCGGG 2295847 29 100.0 32 ............................. TGGGAGCGCCCTAACTACGTGGCCGGGGCTCG 2295786 29 100.0 32 ............................. ACCATCGCCGAGCACGACCTCGGCATCACCAT 2295725 29 100.0 32 ............................. ATGGATGCTTATTCAATTTTGCTCAATCGGGC 2295664 29 100.0 32 ............................. GCCTACCTCATCGACCAAGTCCGAGGCCAATG 2295603 29 100.0 32 ............................. TACCACGGCCAAGAACTGACCGCCCGCGAAGA 2295542 29 100.0 32 ............................. AGACACCAACGGCAAACGCCGCCGCTTCACCG 2295481 29 100.0 32 ............................. CATGATGTCGACTTCAAGGGATGCCCCAGCGA 2295420 29 100.0 32 ............................. CGGCGTCTTGCCGTTCAACACCTGGTTGAAGT 2295359 29 100.0 32 ............................. GTACCAGAAGCGCCCAGTTGAGGTTTTCGGCA 2295298 29 100.0 32 ............................. TCTGGATCGTCTCCACCCGTGGGACGGCCAAC 2295237 29 100.0 32 ............................. CCGTGTCGCCGTCTATGAGCCCGACGGTGATC 2295176 29 100.0 32 ............................. CACCGTCCGCATGGATGGCATGGATGGAAAAA 2295115 29 100.0 32 ............................. ATCGTTCTCGCCTTCGACGTTGCCCTAGACGG 2295054 29 100.0 32 ............................. ACTCGCTAATAGCCTCGGCCTCATCCACCGAG 2294993 29 100.0 32 ............................. ATATGTTGCACCGACGCTCTCGGCCGTCTTTA 2294932 29 100.0 32 ............................. CTCTCCAAGCAGTTCGCGGTATATGGGTACGC 2294871 29 100.0 32 ............................. GCGACGACGTCGATCGAGTTCATCGTGACCGA 2294810 29 100.0 33 ............................. TCGCCGCCGACCTCATCTATCTGACCATGACAA 2294748 29 96.6 32 ............................T ATGGGTAAGCCCACCGGTAGCGGTGGGCTTGG 2294687 29 100.0 32 ............................. GAGTATTACCGGCGCCGACGGCGCGATGAGGA 2294626 29 96.6 32 ............................T GATTTTGTACATGTGCCCATTGTGGGCGGGCG 2294565 29 100.0 32 ............................. GCTTAAAGGCCGGATTCTCTACGCTGACCCCG 2294504 29 100.0 32 ............................. ACTCGCAAGGTGCCCATGGTGGGCCGTACTCT 2294443 29 100.0 32 ............................. AGCATCGCAGCTATTACGGCGCAAGATCTAGA 2294382 29 100.0 32 ............................. GGTGATACAGGCTTGAAGCAGACGACCGGCGC 2294321 29 100.0 32 ............................. AAGGCTCGTACCATCAACTGGTGATTCGAGCT 2294260 29 100.0 32 ............................. GTCTCGGCTTCAGTGTCTGAGGGCGGGGCGAA 2294199 29 96.6 32 ............................T TCATGCACGTGATCGAGGCGCAGGCTGGCAAG 2294138 29 100.0 32 ............................. GGCTACATGTGGCGCACAGCTGCAGGTATTCA 2294077 29 100.0 32 ............................. GCCTTCGCCGACGCGACGTCGGACAAGGAAAC 2294016 29 100.0 32 ............................. CCCGCAGTTCCTCCGCGATTAGAAAGGGTCGG 2293955 29 100.0 32 ............................. GGGCTGTTCCTTGGTCTTGGAGGCCATGGGGA 2293894 29 100.0 32 ............................. GAGGTGGCCGACGTCGTATGCCTTCTTCGGGG 2293833 29 100.0 32 ............................. GTCGGCGAGATCGACGATGCCGTCTTCGGGAA 2293772 29 100.0 32 ............................. AGCGGGGGCGCGGTGGCTGTGCACACCACCGA 2293711 29 100.0 32 ............................. TGTTGGTACTGCGGTCGCTGGGGGTCTCACGC 2293650 29 100.0 32 ............................. CCCGGAGGCGGCGGCCTGTGTTCCCGCATACT 2293589 29 96.6 32 ............................T GGCCGCGCTCCCCAAACCCGCCCCCTCCCTCA 2293528 29 96.6 32 ............................T AGCTCGCCGCGGACGATCTCCAGCCAAAACGC 2293467 29 100.0 0 ............................. | GG [2293444] ========== ====== ====== ====== ============================= ================================= ================== 65 29 99.6 32 CTCTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : ATGCTCAGTACATTGATGGAGATTCTCTCGCCGCATCTTCCTGATCGTGACGACGACCGGCTCATTGGGGGGCGCAACCACGAAGTCGCGGGTCATACGCAATATGGGGTGAAGTAATGTTCGTTGCCATTGTGACGACGGCGATTCCTGAACACCTCCACGGCTACATTGGTCGATTCCTGTCGGAAGTTGATGCGGGGGTATTCGTTGGGAAGGTTTCGCCCGTTGTGCGCGACAACCTCGTTGGCCGCTGCCACCAGGCTGTTGACGACGGCAAGATCGTTGTTATCAGTAGTAGTGCGGAGACGGAGCAAGGCTTTGTTGTAGAGACCCTTGGGAGGACATCACGTAAGATCATTGACATGGACGGACTCCTTCTGAGTGCGATGGTGTCGCGGGGCTGCGCTCTTGAAGAAGTGCAGCCCCGCGAGGCTGAAACTCTGGACCAGGTTTTCATGGAAAACGAGGGCCAGGGCTAGTAAAGCCGCAGGTGAGATAGT # Right flank : CGTCAAGACTTTTGACGGTGCCTACACTGCATTCTCCCCCAGGCGAGAAACGGCATTATGTGAAATCCCCAAATCCCGAGTAATCACAACATGAGGCACACCTTCACGGGCACGAACTTGGATCGCGTTCCGCTCGTGCATACGAAGCACACTCCACATCATCTACGAAGTGCTCAATTTTCACCCTCCGAAATCGCTCAATTTTCATCTGCCGTTAGCGCACTCCAAGTCATATCCGGCAAGAACGGCTCGTCCTCGCGCAAGCGGGGCAATCCCGGGTGGCTACACTATCCGGGACCTGCGCTGGGTGTGGCGAATTTCGTCGAGTTGAAGTCAGCCACTTGTGCACTTATTCTGAGCCATTTCGGCACTTGTGTTGAGCCGCTTGCATCTTGGCTTATCAGCGACGGTCGAAAAGTAGCCCACCTGTCTTCAAGAAATGGGGGATGTTTGATCAAGCTTGGGGAGAGATCCCGGGCAACGACCTTGGCAAGCTCTTC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //