Array 1 233705-232150 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMC01000002.1 Citrobacter braakii strain S649 scaffold2.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 233704 29 100.0 32 ............................. GCGGTAATTCAGGCAATGGCCGGTCGTGGAGA 233643 29 100.0 32 ............................. CCCCTTCGGATACCCTTTCGATTTCGCGCTTA 233582 29 100.0 32 ............................. GCGGTAATTCAGGCAATGGCCGGTCGTGGAGA 233521 29 100.0 32 ............................. CCCCTTCGGATACCCTTTCGATTTCGCGCTTA 233460 29 100.0 32 ............................. TACCCTGAGCGCATCATCGAGGCTATCCAATA 233399 29 100.0 32 ............................. GCCTGTTCATTCCCGACGTTATGACGAAATAC 233338 29 100.0 32 ............................. TCAACGATGACGATTGTATTAACATTTGAACC 233277 29 96.6 32 ............................A TGGTCGTTACCCGCACCACGCGATCAGCACTC 233216 29 100.0 32 ............................. CGCGAAACCTGGCGAATAGCGAGCAGGGCGGC 233155 29 100.0 33 ............................. ATATTTTTTGATAAATTGAATATCCTGCCATGG 233093 29 100.0 32 ............................. TTCATTTGGCCTGCCAGCGCCATCTGGATGAT 233032 29 100.0 32 ............................. GCCTGCGCGAGCCGCAGAATTAGACAATGAGG 232971 29 100.0 32 ............................. GCCAAACGGGCACGGGTTCGCATCACATTCTC 232910 29 100.0 32 ............................. ACAAACAGTAGCAGAGCACCCCACACCGGGTA 232849 29 100.0 32 ............................. TGGAGCGGCCGCCAGGTGATTGGCGGTATTGG 232788 29 100.0 32 ............................. TTAAAGGAGATTTGGGGAGGGGTTGTTTCGTT 232727 29 100.0 32 ............................. CACTGCCGATCAATACGAGCGGCTTCTTTCTA 232666 29 100.0 32 ............................. ATATCTTTGGTTGTCTTGCGTTCTGCATGCAC 232605 29 100.0 32 ............................. CCGAATTTCTCAGCAAATGCCCACCAGTCGCG 232544 29 100.0 32 ............................. AATCAATACCACGTTACCCCGGCGGACAATGA 232483 29 100.0 32 ............................. GCCGTTTTACGATCGCTTGTTACCACGTTGGG 232422 29 100.0 32 ............................. CCGCTGGAGTCGATTAGCTTGGGTGAGTTGAT 232361 29 100.0 32 ............................. TCAACGACATTATTTTTCTCAGGATAACTGAT 232300 29 100.0 32 ............................. TTTGGGGTTCGGTGCGTCATTTGTGCATAACG 232239 29 96.6 32 ............T................ TATTCAGAAGGAGTTCCTTTACCTGCTCTGAC 232178 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 26 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGTTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCTGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACTGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAAAGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCAGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //