Array 1 180107-184771 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMLA01000009.1 Sphingomonas sp. Leaf32 contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 180107 29 100.0 32 ............................. TATTGACGGTGATTTTGTCCGTCGTGATCGCA 180168 29 100.0 32 ............................. TTCTGTAGAAGCGCCGTTGCCGATCGCGACGA 180229 29 100.0 32 ............................. CGGCCGAGGACGTCGGGGGCGTACTGCTCGAT 180290 29 100.0 32 ............................. CGAATGGCTTCGACTGGGAAGGATGCGCTGAC 180351 29 100.0 32 ............................. CGCTCGGCTTCTTCGGGCTCGATGGTTCGGAC 180412 29 100.0 32 ............................. TCTCCGGGGTCCACAAGGGCTCCGGGGGTCTC 180473 29 100.0 32 ............................. TCGATCAGCTTCGTTCCGACGACGAGTCGTTC 180534 29 100.0 32 ............................. CGCGCCTTCAACATGCTGGAGGCGGATAAGGG 180595 29 100.0 32 ............................. ACGGCCGGAAATCGGTCATCTGGACTATCTTC 180656 29 100.0 32 ............................. ACGATCGGAAAGCCAGTCGGGGTGTCAGCCGA 180717 29 100.0 32 ............................. ACGCCCGGCTCTGCATCCGAGAGCCCGATCGC 180778 29 100.0 32 ............................. TTCTCGACGAGCGCTGCCAAGGCGCACGCGCT 180839 29 100.0 32 ............................. CATGTGGCATCGCCCGCCAGCACGCCGGCCGG 180900 29 100.0 32 ............................. AGGTCGAGCAGCTTAGGACGCCTCACCTCCCC 180961 29 100.0 32 ............................. GGAATGCCGCTGTCGAGACCGATCGCCTTGAG 181022 29 100.0 32 ............................. CAAGCATGAGCGCGCAGGCTGAATGGCCCAGC 181083 29 100.0 32 ............................. CGCGCGGCGATTACCGGGCAACCGACGAAGGT 181144 29 100.0 32 ............................. ACACGGATGGGATGGAGGCATGGCACCCCATC 181205 29 100.0 32 ............................. TTTGCAGGCCCACGCCGGGCCCGCAGGCCGAA 181266 29 100.0 32 ............................. CGCTCGAGGCCGGACGCGCGCAGCACGCCCGT 181327 29 100.0 32 ............................. CGAGCTGCGCCGCCAGGACGTCGACCGGCGTC 181388 29 100.0 32 ............................. ACGTCCCAACGGGTCGCCCAAGTCGGGGGATC 181449 29 100.0 32 ............................. GACAGCTTCGGTCGGTTCGGCCAGAACGGGGT 181510 29 100.0 32 ............................. AACATGCGGCTGCGCCTGAACCAGGTGAAGCC 181571 29 100.0 32 ............................. CATCGGTGATTGGAACGGGGAAGCGCCATACG 181632 29 100.0 32 ............................. AGCTACTACGTCACCGACAGCGTTGCGATTAC 181693 29 100.0 32 ............................. ACGATCGCAGCGAACCCGGAAGCGGGTGAAAT 181754 29 100.0 32 ............................. CCGCCATCGCTGACGGTGACTGCTGCCGATCT 181815 29 100.0 32 ............................. CCCATCGCGCAGGCCCGCAACTTCCGCGACAG 181876 29 100.0 32 ............................. ATCGACGCCGCCGGCACAGACGAAGCGCGCCG 181937 29 100.0 32 ............................. GCACTGGCGGCGGGTCATGTCCGCTTCAATCG 181998 29 100.0 32 ............................. AGGTCAGGGGCCGGCAGATCGTCGTAGGACAT 182059 29 96.6 32 ............................G CTGGCCGATGGTGGCGGCCTCTATCTATGGGT 182120 29 100.0 32 ............................. GGCTCCTACGACGATTGCAGCGGTGCGGAGCG 182181 29 100.0 32 ............................. CCGCGCAGCGCGTCGTTGCGGTGCTTGCGCCA 182242 29 100.0 32 ............................. CCGACGGCGAGATCGAGGATGTCGATCCCGGC 182303 29 96.6 32 ............................T TGGCCAACCCGCGCGGCGCTGGGCGGGCGTCG 182364 29 100.0 32 ............................. TCGTCAAATACTGTTATTAGCCTCCCGTTTTC 182425 29 100.0 32 ............................. TCCATTGGTGATATGCGTTACGCAACCGACGC 182486 29 100.0 32 ............................. AGGCTGCCCGTTCTTATCCATTGCAATCTGAT 182547 29 100.0 32 ............................. CCTGAACGTCACGACCAACGCAAACGCCGCTA 182608 29 100.0 32 ............................. TCGAGCGCCCGCGGCGTCCTGTCGATGCCGGC 182669 29 100.0 32 ............................. CCATCCCCGGCAGGCGCGGAGGCGAGGGCGGC 182730 29 100.0 32 ............................. CGATCTCGAACAGCGGCAGGCTATCGCACAAG 182791 29 100.0 32 ............................. TGATTGAGCGCCCCGCCGAGGGCGACGATATC 182852 29 100.0 32 ............................. CTAACCGACACGCTTCTAGCCGTGACCAACGC 182913 29 100.0 32 ............................. CGGCAATAACGTCTTCTTGAACCCCTTGGCGT 182974 29 100.0 32 ............................. GGGACGGGCGAAAGGTTCGGCGGCGAGCATGC 183035 29 100.0 32 ............................. CTGGTGCGGTGGCGCCGGGTCGGTCGGCCGCA 183096 29 100.0 32 ............................. CTTGCCGCTGCCGGAGCGCCGCCGTCAATGGC 183157 29 100.0 32 ............................. AATATGGTCGGCACCGGCATCACGTTTCAGGT 183218 29 100.0 32 ............................. GACTTGCCGGGCGCGATCAGCGCTGTCGGATC 183279 29 100.0 32 ............................. TCGACGTCCTCGAAGAGCGGATCAAGGCGGAC 183340 29 100.0 32 ............................. CTGCTCAAGCCCAAAATCCAGCTGGAAATCGA 183401 29 100.0 32 ............................. CTCATGGCCGTGTGGTGGCCGTTCCAGAAGGC 183462 29 100.0 32 ............................. GCGACCGAGCAGCAGGCGCTCGACCGGTTCAT 183523 29 100.0 32 ............................. AGCATTACATCCGCCTCCCGACAAACACGACC 183584 29 96.6 32 ............................T TCATCCGGGGCGTGCTGTCGCGCTACACGGTC 183645 29 100.0 32 ............................. CCCGACGGCTATGCCGACCACATCATTTCGTC 183706 29 100.0 32 ............................. GACACCCGGAAAGCTATCAAAGACCTTCCTCA 183767 29 96.6 32 ............................A TCAGGTTGCCGCGTTCCGTAAGGCTGGCGAGT 183828 29 100.0 32 ............................. TTGACGGCGTGTGTCGTGCTTTCGGGCGCGTC 183889 29 100.0 32 ............................. GCACTGCGCAAGCCCAACAAGGCGATCACGCA 183950 29 100.0 32 ............................. CGGATAGCTGCCGAAAGGCTTGGTAGCCACAT 184011 29 100.0 32 ............................. GGTATCACTGGCCTCCGTGCCGTCGATCCGCA 184072 29 100.0 32 ............................. GTCATCGACTATGCGTTCGTCGCGCGGGACGT 184133 29 100.0 32 ............................. CAGCGTAAGACGTGGGCGGCGCGTCCGTACAC 184194 29 100.0 32 ............................. CGACGGAAGACCGGCTCACACGCGCGGTAGTG 184255 29 100.0 32 ............................. TATTCCGCGACGGCAAGATAACGCTTCGCGAC 184316 29 100.0 32 ............................. TTGACGCCTTGCGCCCGCAATACCTGGCCAAT 184377 29 100.0 32 ............................. CGGCTTCTTGCCGATGGCTTCTTGTGCCCGCT 184438 29 100.0 32 ............................. AACGGTTGCGTCAGGTCATCCGAACGGTAAGT 184499 29 100.0 32 ............................. CGGGCGCGTTTCGCCAAGGTGCTTTTCTAGCA 184560 29 100.0 32 ............................. TGCACTGAAAGGAGGTCGGATATGCCTAGCGC 184621 29 100.0 32 ............................. GTCTCCATGCCGCCATTGGCAATGGCGCGGGT 184682 29 96.6 32 .........................A... GGAGCGGACCTGCTGACGTTGCTGGCCGAACA 184743 29 93.1 0 .........................A..T | ========== ====== ====== ====== ============================= ================================ ================== 77 29 99.7 32 GTCTCCCCCGCACCCGCGGGGATCACCCC # Left flank : GCGGCTCCCATCGAACGGCTGGTGCGCAAACGCGCCGCGCTGCTGTTTCGCCAGCGCAGCCTGATTCCGGGCATGATCGACCGGATCAAGGCGCTGATCCTGGCCGAACCGGCTTCGGCAACGACCTGATGCCGCTGACGGTGGTCATCACTCGCGATGTCGAGGACCGCTATCGCGGCTTTCTCGGCTCGGCGATGCTGGAACTGGCGCCGGGTGTCTATGCCCAGCCGCGCATGAGCGCCGGCGTGCGCGGCCGCATCTGGACCGTGGTGGAGGAATGGCACGGGCGGTTGCGGCGCGGCAGCATCGTGATGTGCTGGGCCGAACCCTCGTCCGCCGGTGGTCTCGGCCTGTCGGTGCTGGGCGAACCGCCCAAGGACGTGGTCTCGCACGACGGCATCCTCCTGGTCCGCCGCGCGCTCGGCTCCCGCACCCTGTAAAACCCGTTTTGCAAGACGCTCTTTGACATAGTAAACAACTTCCGTAACTTATGGCCTAGA # Right flank : TTACCCCGACCCTTTTGTCGTGCTGCGCCTAGCGTCTCCACGTACAATCGCGAGAATTACTTCAGCCACCGATCTCCTTCAGCAAAGCAAATGACTCCATCCGCCCTACTACGTCTGCACCTCGGCATCGGTCATCAAATCGTGCCCGGCCAACCATCGCACCACCTCCCCCGCGGCAGGGTGGTGGAGGGGGGTGTATTGGGATTGGAGGGTTGGGATGCGGATGTTCAAGCGGTCGTGGCCGGTGTCCTGCAGGGTCAGCAGGTCAGCCTGCAGCATCGCCGCCAGTTCCCGGCCCAGCAATGTCGTTGCCGCTTCGATAAAGGCGATGGCGTAGGCGTAGTCCGGACCCTGGCGGTACAGCATCGGCAGGGTCAGGGCGGAGATGCAGGTCAGATGCGCCTGGATCGCCGGGTTGATCGCATGGCCGGTCAGCCACGGCGCGATGCCCGCGCTGCGGCCGGTGAACGCGCGCAGGTGGAGGTGGCGCGACATGCGGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACCCGCGGGGATCACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //