Array 1 2770236-2770989 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031941.1 Nostoc sphaeroides strain Kutzing En chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2770236 37 100.0 35 ..................................... ATGCTTTTGCGCCTCTGTATTCATCTAATGTGAAT 2770308 37 100.0 36 ..................................... TTCGCACTTCGCTGCAAGTCCTTTTCACTGCTCGCT 2770381 37 100.0 37 ..................................... GAAGGTTTTCTCAACCTAAAACTCGTTTTCGCACTTC 2770455 37 100.0 37 ..................................... ATAAAACTATAAAATTGACTAATAAATTAGAAGTTAG 2770529 37 100.0 34 ..................................... GAAGCATGGGACGGAATGAAAAAGACTTGGAAGA 2770600 37 100.0 35 ..................................... CCTGGCTTATGGCAAGCAAGAGTATCTTGTAAAGA 2770672 37 100.0 34 ..................................... ACAAGCTTTCTATGGTGGTAACATTCTCAACGGC 2770743 37 100.0 34 ..................................... TTGATGAAGCTGGTATTTTATTAAATTCTCGTGA 2770814 37 100.0 32 ..................................... TGATTTTAAAATAGCTGATGATGGGACTGTAG 2770883 37 100.0 33 ..................................... CTAAATAAGAAAGCGATCGCAAACTAGTTAAGT 2770953 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 11 37 100.0 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCGGTTCTCAAGTCTTACGGGCAATGGATGCAACTGAGTGTGTTTGAGTGCGATATCACTCTCACTCAGTATGCTAAACTGCGATCGCGTTTATCTAAATTGATAAAACCCGACACCGATAGCGTGCGCTTTTATTTTCTCTGTGGCTGTTGTCAGCGAAAAGTCGAACGCATTGGTGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAATCTGCTTCTAGCTAAGTTCCTGTATCTCAAATGCGCGGAAGGGTAGGTGTACAAATTCCACAGCCCCAAAAAAATGCTTCTATCTCAACTCCAGCAAGGCTTTCAACCTATTAGTCGCCTAATCCTCATCCGCGCAACCTCTGAAATGCTTACCAAAATGCGATTTCAGCCTTTAAATTTTACTGGCGCTCTTTTCAAACGAATTCTCTAATGCTATGATTGCCGTTGAATCGCGCAACCGCACCTTGGAAACTAAATATAGCTTGGGTTTTAGGCTCCCGCC # Right flank : CCATATTGTCATGTAGCCAAAAATCTTTAGTCTACTTCAGTAGACTTTAGCTAAAAGCCAAAGAACTTTAGTTCGAGGCGGGTGAGGAAGCTAACAGTTAAGCTACTTTTAGCTTAAGTTGACACCTTCAAAATTCCAAAATTACCGGCGTATGGTCGCTGGGTTGGGTTAATTTTCTAGGCGCAACATCGATAATGCAACTTGTAGCACGCTCATACAGAATAGGTGTGAGATAGTGATGGTCAATCCGCCAACCTAAGTTGCGACGGAAGGCGGCGGCGCGATAATCCCACCAGCTATAATTTCCGCCTTCTGTGGTGAACTTGCGAAAAGCGTCAGCAAACCCCAATTTCAGGATATCCCGTAAGGCTTGGCGCTCTGCTTCTGTTGCCATAATGTGATTTTCTGTACTCACTTGTTCGTGAATATCCTTATCTTCTAAGGCGATGTTGAAGTCACCGCACACACAAATTGCAGGTTCTGACAGCACCAACAATCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 2 6172672-6170769 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031941.1 Nostoc sphaeroides strain Kutzing En chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 6172671 37 100.0 38 ..................................... TCCTGATCCATTGATTATAAATCCTAATTGAAGGTACC 6172596 37 100.0 34 ..................................... TCAAGCCAGATTCAATCCAATTCTCCCAAGGGAA 6172525 37 100.0 35 ..................................... AAGAAGACTGGCACAAAGACCGTACAAAGTAGAAT 6172453 37 100.0 34 ..................................... TGATGAGCTTGCCAGTTTTCAATACAACACTGCG 6172382 37 100.0 35 ..................................... GGCACAGTTTGTATTCAGAAATGGCAGATGGGTGT 6172310 37 100.0 33 ..................................... TAAACTTGAACGACTGAGAATTCACCCCGACAA 6172240 37 100.0 35 ..................................... GCATCATTTTGCGCTTTGAGGAGGGTAAGCCAAAA 6172168 37 100.0 35 ..................................... CTTGACAATGCCATTTTCTAGAATTTGGAGGTTGC 6172096 37 100.0 34 ..................................... CATAATCTGCATACCACTTCACCAATAAATGAAA 6172025 37 100.0 35 ..................................... GCTGTGGAAAAATCCGTTGGAACTGCAATTACAAA 6171953 37 100.0 38 ..................................... CTTTTCACTGCTCGCTGCGCGAGCAGTGAAACCCAACC 6171878 37 100.0 32 ..................................... AACTAGAGCGCAGTAAGTAGAGTGCATATTAA 6171809 37 100.0 35 ..................................... AGGTGTAACTGGATTAGATGACTGAACAAACTAAA 6171737 37 100.0 32 ..................................... TCAGATGGATATACGTAGTCATTTGCAGATAG 6171668 37 100.0 35 ..................................... AAGTACAAAATAAATTTTGATGACACGACGATTGA 6171596 37 100.0 35 ..................................... TAGTTTCTCCCACCAATTCCCGAATAATCTTTTTA 6171524 37 100.0 37 ..................................... GCAACACTGGAATTAAACTATACTTGATTCAGGTTAC 6171450 37 100.0 33 ..................................... TTACCCCAGGATAACTGCCAATTTTTCAGAATA 6171380 37 100.0 37 ..................................... AGAGGGTTGATGGCTATTCACGTCAGACAAAAAGCGA 6171306 37 100.0 34 ..................................... CTTGCACCTTTTGAGAAGCAATTTGTAATCCAGC 6171235 37 100.0 34 ..................................... AAAGCTGTGATTAATGCTGGCAGCAAAGCAAAAT 6171164 37 100.0 33 ..................................... TCACTGGAATACAAACAAATCACAGCCTAGAGA 6171094 37 100.0 37 ..................................... CTTGCACCTTGATGTATTTGAGAGATTTGCTGGACAT 6171020 37 100.0 35 ..................................... CTTGACTCCAGCGATAAACGGCGATCGCACTACTA 6170948 37 100.0 33 ..................................... AGCAGCTTACGGGTTGAGGCCGCATGAAATATT 6170878 37 100.0 36 ..................................... CAATGAGTTTTACAAGGGCTGTTGCCATACTCCCTT 6170805 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 27 37 100.0 35 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : AGCTTTATCAGTTTATATCGTCTTGCTTGAAACAAGTTGACCGCCAAGATCGTTTTATGTTTTCTCTGCTGTTCATAGAATTAACAGACCTCATCCGCAATTCTTCCCTAGAAAGGGGAACGAAAGAGGTTTTGATTAAAACAGCTTTTAGGGAGTTTGCTTGTGCCATAACAGACTTTGAAGACGTTGCCAAGTAAGGTTGATCAGCCAACCTAATCAAGTAGGATATTTATAAGTAAGCAGCTTTTCCATTAGATTAGTTTTTTCGCTGTATGCGCGGATGGGTAGGTGTTCAAGAAGGAGTGACCACAAAAATGGCTGAATTGCCCTATATGCAAGAACTTGAGAGCGTTAGCATTTCTAAACCATCCGCGCACCTTATGGGGACTAGTTTTCAGCCATTTGCCTCTAGCCAATTCACAACTCCTCGTGTTATGATTTTTGCATTCGCGCAACCGAACCTTGAAAACCAAATAGAGCAACACTTTCACAAGCCAGCG # Right flank : TCTTGGAGAAGCTACGCGATCGCATCCTATCAACCAATACAGTTCAGTTAAGGATAATCGTAGGTTGGGTTGAACTTTAGTGTTACCCAACAAATTCTCATAAATGTTGGGTTTCGTTCCTCAACCCAACCTACGCAGTTTAAGGTTTTTGGCTCTAACCCAAGCGTATTGTCCTATCAACAAAGTAAAATCCCCACACTTGAGGCAGGGACTATAGGCTGACTCTAAGCAGCTATTAATAGTAATTCATAATTTAAATAGCGTTTAAGATTTATGAATTAAGAATTAATAATTATTTAGTCAACTAAGATACTTTCGGTTGCTGCCATAGGATGAGTTTCAATTCAGAGCAATAGCAACCCCCACCGGTAATTTCTCCTTCGTGGTCAGCTAGCCAATCATAAATTTGTGTAGCTTTAGCTAAAGCCACTTTTTCTGATCGATAAAGTCGAGGAGTAGGGCAGTAGGCTTGGCCATTGATGTGTATAGCTGCAATCTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //