Array 1 68709-65629 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLZR01000013.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_113, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 68708 29 100.0 32 ............................. GTTATTGTACCGTGCCAGCTTCTCTTTCATTC 68647 29 100.0 32 ............................. TGCGGAGCATCTATTTTAGATGATGATATAGT 68586 29 100.0 32 ............................. GCGTTTTAGTTGCTGGAGCCACAATATTAAAC 68525 29 100.0 32 ............................. TTGGCAAAGTGATGATGCTTTGGATGTCTGGT 68464 29 100.0 32 ............................. TTGTGTTTGTTGATGATGTTGCGACGGGTTCT 68403 29 100.0 32 ............................. GGTTATCACGAAAAGCCCTTGCCGTTGACTGA 68342 29 100.0 32 ............................. GACCCGAAGCGTGGACTATTCTCATTTATCGG 68281 29 100.0 32 ............................. TTGTTGATAAGAGGGGGTGTGGACTGCTCTTA 68220 29 100.0 33 ............................. CCGCAATCGATGGCATGCAGACTATCGCAGCCC 68158 29 100.0 32 ............................. AAATTTAGAGCGCCAGCCGGAGTTGATACGCT 68097 29 100.0 32 ............................. TTATTTGTGAGTACGTTTCATTTAATGCAGCA 68036 29 100.0 32 ............................. TGGGGTTTAGACGAGCAGCAAGAACTGATTCA 67975 29 100.0 32 ............................. ACATTAATTCCCACCTATAACGAGCACAACGG 67914 29 100.0 32 ............................. TATATCTGGCGGGTCATACAAAGTTTCGACAG 67853 29 100.0 32 ............................. GTAAAACGTCATTTCATTCTGCGAGACGTTTG 67792 29 100.0 32 ............................. CGCAAAAAAGCATTCCCATGCAACGGAATGGC 67731 29 100.0 32 ............................. GCTGGATTTGGTGACAATGAGCAAACTATCTG 67670 29 100.0 32 ............................. CAAAATTCCCGCATCGTTTCTGGTGCAATGTC 67609 29 100.0 32 ............................. CCGGTTGATGAGTCTGTTAATTTTTGGGAATA 67548 29 100.0 32 ............................. AGGCAGGTCATTAGAACCCGGCGCCACCAACT 67487 29 100.0 32 ............................. CGCCAATAGATGTAGTTTGAAGCATCGTAATT 67426 29 100.0 32 ............................. CCGCCCATGCCATCGCTCGTGAGTGTTTCACG 67365 29 100.0 32 ............................. CATTGAGACATCAGCACACGGAGTATACAACC 67304 29 100.0 32 ............................. CTAACTGCTGCATTTACCGCTGCTGCTACGGC 67243 29 100.0 32 ............................. TCGACTCAATAGCAGACCTTGCAGATTTGAGT 67182 29 100.0 32 ............................. TCTAGCATCAACGGCCTGATTGATGGCATGAA 67121 29 100.0 32 ............................. TTACTGACGGGTACTCCAGCGCGATAATCCGC 67060 29 100.0 32 ............................. TTAGACCCTCGGATCAGATGAGTGGGTTTTAA 66999 29 100.0 32 ............................. CAATGGGGATATAGCGCTCAGGCGATAATTGA 66938 29 100.0 32 ............................. CTACCCCTGAGCAATGGGCGCAAAAGACAGTG 66877 29 100.0 32 ............................. TCGCCATATCACACCGCCGTCTCTAACTGAAT 66816 29 100.0 32 ............................. CCGCACCGGAACTGAGAAGTTCATAGCTAGGC 66755 29 100.0 32 ............................. ATACTTGCATACTTAATTTTGACACAGGAACC 66694 29 100.0 32 ............................. GTCATGTCGTCTGAACCGTCATCGTCATACGC 66633 29 100.0 32 ............................. CCGGTTGATGAGTCTGTTAATTTTTGGGAATA 66572 29 100.0 32 ............................. AGGCAGGTCATTAGAACCCGGCGCCACCAACT 66511 29 100.0 32 ............................. GATGAGTTTGTTGAGTGGGCACTTAATGATGA 66450 29 100.0 32 ............................. TCAGCCCATGTTTCTGTATACGGCTCGTTATC 66389 29 100.0 32 ............................. GCAGAGTTTGCTCGCCGGGTTGGGTGCCATAC 66328 29 100.0 32 ............................. CATTTTTGCTGGATCAGGGCGAACGACTGGGG 66267 29 96.6 32 .......T..................... AAATCGCACGGGCGCAGGCGATAAAGGACGCC 66206 29 100.0 32 ............................. ACTCCCCAGGTTGATTCGGTTGCATTGTAAAA 66145 29 100.0 32 ............................. TCATTCGGAACGATTACAGACCATGTTAAGTG 66084 29 96.6 32 ............................A GCCGCCCCGCTGCCGCTGGTGGCATCCGAGGC 66023 29 100.0 32 ............................. CGCCAGTATCCAGGACAAGATAACCGACCTAT 65962 29 96.6 32 ........T.................... TTTATGAACGTGATTGGTTGACGGCAAGAGGC 65901 29 100.0 32 ............................. TTCGCGCATCAGGCGCAAAAACTCGGCTTCAC 65840 29 96.6 32 ..............T.............. TTTGTCAGGTCTACGTCGTCTAATGTCATTAG 65779 29 96.6 32 ..............T.............. CCATGGTGAACGTGCAGCACGAAATCGCTATC 65718 29 96.6 32 ..............T.............. ATACATGGAACGGTTTCTATAATCCGTCAAAT 65657 29 89.7 0 ..........A...T...........T.. | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.4 32 CCGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : AAACGTTGATCCCCTTAATTGAGGAAGTTCTGGCCGCCGGAGATATAGAGCCACCTTTGCCACCAGATGATGCCCAGCCACCCGCTATTTCTGAGCCGGATAGTATCGGTGATAGTGGTCATAGGAGCGGTTGATATGGCAATGCTGATGGTCGTAACGGAAGCAGTACCAGATCGATTGCGAGGCCGCCTTGCTGTCTGGCTGCTTGAGATTCGAGCCGGTGTTTATGTTGGCGATGTTTCCCGGCGTATCAGGGAGATGATCTGGGAGCAGGTGGATGCACTTGCAGAAGATGGCAATGTAGTGATGAGCTGGGCAACCAATACGGAGTCTGGTTTCGAGTTTGTTACTTACGGTGAGAATCGTCGTGAACCCATAGGTATTGATGGCATGAGGCTGGTTAAATTCAAGCCTGTTCAGTGCAGTAAATAATCCAATAAAAACTTGGTAGATTGAAAACAATCTAAATTGTTCTTTAAAAACAAGCACCTATAATTAGA # Right flank : AACTCCGCCTGCTTTTGCTGAGTAGTTGGTTGCCGTTTTCCATCAGGTTAAGCGGATGTTTGGCTATTTTGATAACGAGGTGCTGGCGCTGCATCGAATTTCGGTTGGGGGGTATACGCTGGCGGGGTTGGCTGAAGGGGAGAGCCGTGTAATGACAGAGGATGAAGTAAGCTTGAAGTAGCCGCTGTTACTAAATGCGGGCGGGACGCCCGCGTTCCGGTTCGGGTCAACTGCTTTCCAGTATGCGAATCGCACTGCTCGCCGCCGCCGTTCTATTATCCACCTCCAGCTTTTTATAAATCTGTTCCAGGTGCTTGTTCACGGTACGCGGGCTCATTTCCAGTATGGTGGCGATCTCCCAATTGGTTTTGCCGAAGGAGAGCCAGTACAGCACTTGCGATTCGCGCTTGGTGACGTTCAGCGCTTGTTGCAGGTCGGCTTCGGTGCCCAGCTGTTTGGGCTTTACCAGCCGTATCAGCGAATGCAGTTGGTCGTAGTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCAGTCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //