Array 1 208210-208046 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB822601.1 Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00003.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 208209 32 100.0 33 ................................ ACCTGGGGGATTGCCTCGAATCGCTGAAGCAGA 208144 32 100.0 35 ................................ ACCAGCTCGGCAAGCAGCTCTTTCTCCCGCGCCTC 208077 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 100.0 34 GTCACGCCCCTCGCGGGCGTGTGGATTGAAAC # Left flank : CCTGGTGTTCGCGCAGATGACAGCTGGCACAGGCCTGGCTGCCGACGAATTCCGGCTGTGCGGCCCTGGCCTCGTTGCTGTCCGGCCAGCCGCCGACCAGCCCAGCGAGCAGCGCGGCGGCCAGAAGCCAGCGCAGCAGGGGACGCGACGAGCGTAGCGCCCAGAGAAGGCTCAACGTGATCAGCATGTGGTGGCCGGATCCGGAAATAAGGTATCGCAGCCCCTATGCTGCCCAGCGCCGCAGCCCCGTAACAGGGCCTGCCGCGAATAATTGCGCGCTCACGCAAGTGGCTGCGCTGAGCCGATAACGGCTTGCCCGGCATCTTGCGAATACTCCCTCGGGAAAACAACAACAAGCCCTTGCGGAGAACACCATGGCACCTACTGCCATACCCCTTGCCAACACCTTGCTGCCCGGTCGGTTGAGCGGGGCATGTCTGCTGTCCTTCGGCTTGCTGTCCCCGCTGGCGGCCTGTGCCGACCTGATCGCCGACAGCCAG # Right flank : TGGTCGATGCGGCCAAAACCACCCAGATTGGAGTCGGGTCACGCTGTGGATTGAAACAACGTCGAGCCCAGCGTCCAACAGAAACTCGAAACCGTCACGCCCCTTGCGTCCAGGGGGGTAGGTGGGCGCCTGTTGTTTCGCATATGCGGCTGCATACAGAGTGGCTGCGTCGGTGCTGAGGATCCGCAGCGCAAGCAGGCAATTGCTGAGCAAGGCGTTCTCCAGGTTGTTCAGTTCCTGCGAGCAGGTCAGTGCATGCCGCACCCCGGTCAAAGCTGCTGGCGTAGCTGGGCGGCGTCATGGAGTTGATCCGGTGCGGCGTCGCCTCTGACGCTCAGCGCTTGATCCAGATCCTGTGTCAGGGAGCACGGGATGTGGTCGCTGGTGTTCTGGTGCATAGGCAGCTTCGGGGTCGGCGAGTGTCCATCCATGAATGCAGTCCTTGGTGGTTTTTACAAGGCTGGGTAAGAGGCGCCGGGCATGAGAAACACGTGCATCAT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCCCTCGCGGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 146380-144583 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB822604.1 Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 146379 28 100.0 33 ............................ CGCCTACATCTTCCATGCCCGCAGCGCAGACGG 146318 28 100.0 33 ............................ CAAGCCGGGAAGATATCCCTCGGCGCTCGAGCC 146257 28 100.0 33 ............................ TACAACGCATTGGTTGTCGAAAGTCTCCGATGA 146196 28 100.0 33 ............................ CCAAAAGTCTCACCGTGAGACAAAAGTCCACCA 146135 28 100.0 33 ............................ CGAGGGCCGCGATTATGAGAAGTGGATCAGGAT 146074 28 100.0 33 ............................ TAAGGATCGCGGGCGATGGTTTCCGGCAGTGCT 146013 28 100.0 33 ............................ CAGATCGAGCGCGCCATCAAGCGCCAGCGTGCG 145952 28 100.0 33 ............................ CATGGATAAGAAGTGGCACAGCTTCGGGAAGTC 145891 28 100.0 33 ............................ TATGCGCGCCTGATGAAGCGCAAGGACGAGGGC 145830 28 100.0 33 ............................ CACGTCGTGCGCCGCGTTGACCATGATTTCCTC 145769 28 100.0 33 ............................ CCCTTGTGAAACCCTCCGCTGGCATCGGCCACG 145708 28 100.0 33 ............................ CTGCACGGCTTGGGAATCGAACAGCTCACTGCC 145647 28 100.0 33 ............................ CTCCCAGCGCTTGATAACTTTGCCCTTGTGGCC 145586 28 100.0 33 ............................ TTCATCGCGCTTCGACTCCGGATCTCTTCCAGC 145525 28 100.0 33 ............................ CGCAGCTGGACAACAAGGCCCTGCGGGACCTGG 145464 28 100.0 33 ............................ CATCATGTTGTCCGCTGTCGTGGCTCGGCTGGC 145403 28 100.0 33 ............................ TCTGCATCTATAGGCGACTTCACTCGCCAGGCG 145342 28 100.0 33 ............................ TTTCCAGTTCGCACCCAGAGCGCTTGGGAAGCT 145281 28 100.0 33 ............................ CGGCAAAGAGCCTACCGAGAGCGGCAGAAGGCG 145220 28 100.0 33 ............................ TCGCAGAAGCCGGGCCATTCTGCCGGGGCAGTA 145159 28 100.0 33 ............................ CCCAGCGGGTTGGATCGACGATTCGACCGTCCG 145098 28 100.0 33 ............................ CCCGCTTCGGCGGGTTTTTTATTGCTCGGAGAA 145037 28 100.0 33 ............................ CAGATCCGCGCGCTGATGGCCGCCGAGCAGGTC 144976 28 100.0 33 ............................ TGGAAGTGCGGCCATAAGTGCCGCTCGTCAGCA 144915 28 100.0 33 ............................ CTGAGGAGCTTACTGATCCTGATTTATCGCTAT 144854 28 100.0 33 ............................ CAAATAGCGACCCATCCGGCACAGTGCTGATGA 144793 28 100.0 33 ............................ CGGAGCCGATATAGTGCAAACAGGTGTCGAGTT 144732 28 100.0 33 ............................ TGAAGCAGATTGATGATGAAAAGGTGCTGGCCG 144671 28 100.0 33 ............................ TCAACTCCTGCGCAGGTTTGCCCCATGAGTGAC 144610 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 30 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCCA # Right flank : CGAAGGGGTGAGGCTGTACCTGGCGGCGCTTAGGATGCCGAGTCGGAGTGCGGATAGGGCTCGGAAATGGCACAGCCCATTTGGCCCCCAGGAATGCGCTTGGGGGCAGTGCTTATTTGGGACCGGGACGGTAGGGCCTGACACGGGGGAGATGGCGCACCTGGCGGGATTTGAACCCACGACCCTTGCCTTCGGAGGGCAATACTCTATCCAGCTGAGCTACAGGTGCGTATTTGGAACGAAGGCCTAATTTGACCACTAGCCTTCGCGATTCTCAACTCGGTGAGTACTGCCTTCGGAGAGCAGTACTCTACCCAGCTGAGCTACGAGTGCGTTGCGGGGCGCAATAATACGCATCTCCCCGCCGGGCGTCCATGCCGGTGGTCTCGATCGTCGCCTAGCTGTGATCTCTCAGTTGGTTGTTCATCCGGAGTATTCCCGGAGTTGTGGATATGCATCCTACGCAGCCTTCCAGGAGTCCTGGATGACTCCGCATGAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [33.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 148191-147675 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB822604.1 Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 148190 28 100.0 33 ............................ CAGGTGCGCGGCAAGTGGGAAGCGCCAGAGCTG 148129 28 100.0 33 ............................ CCCTGGTCATCTTCGGCCTGAAGAACATGGCGG 148068 28 100.0 33 ............................ CGCTCGAAACTGTCAGTGACGTATGGGACTACG 148007 28 100.0 33 ............................ CGAGGGCCTGCCGTACTACGCCAAGCTGGATCG 147946 28 100.0 33 ............................ CGCTCGAAACTGTCAGTGACGTATGGGACTACG 147885 28 100.0 33 ............................ CGAGGGCCTGCCGTACTACGCCAAGCTGGATCG 147824 28 100.0 33 ............................ CAGCCGCTCGGTAGTTTCGCCGCTGGAGTCGGT 147763 28 100.0 33 ............................ TCGATACCCAGACCCCATGCCGATGCGCTTTAG 147702 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAGGAGTCCCTCTGCATCGATCTGGCTTTTTCTCTCACGCGTGAACTGGCGGGGCGTTACGACAAGCACAAGGTGTCGGCCGCGTTTCGCCGGAGGGTGCTGGATGCGAACCTGTTGACAAGGATCGGGGACGACATTCAGGAAATTTTCGGAGAGGGTAATGCTCGTCGTCGTCGCAAATGACCTGCCGCCGGCGGTCAGGGGACGGATGAAGCTTTGGTTCATCGAGCCCCGTCCTAACGTATTCGTATCGGGCATCAAGGATTCGGTGGCGACGGCGGTGATTGATTATTTATACAAACATTGCCCGCCCGAATCGGGCCTGCTGATGTTTCGATCTCTTCCGCAGCCGCCCGGTTATGAAGTCAGAACCATTGGCCCCCCTCGAAAACCGATGACGAACATCTCGGGTTTGCAGCTCGTTGTCGAAACCCTTGTATCGGCGTAACCCCAAGATCTTGTATCAGTAATAGGGCTCCTTAACAATTTGTTGGT # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-11.60,-11.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //