Array 1 123751-117744 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJKFP010000007.1 Rubrivivax sp. JA1055 platanus_K_default_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123750 29 96.6 32 ............................G CGCATCAGGTGCTGACCTCGCAGGCGAGCGCG 123689 29 100.0 32 ............................. GGCGCGTTCGACGTCAACTTCCCGGTCGCCGC 123628 29 100.0 32 ............................. GGCCCGGGGGCTGACGCGCCCAGGCTGAAGCC 123567 29 100.0 32 ............................. TTCTGGAACGCCGGCGCCAGGTTGGCCTCGGC 123506 29 100.0 32 ............................. TGCACCCAGGCCTTCGCGCGCGACGTGCTTGC 123445 29 96.6 32 ............................G GCTGAGGCCGCGCGGCTGGGGGATCTGGCAGG 123384 29 100.0 32 ............................. CCCGGGCCACAGCCGCCAGGCGCTGCGTCAGC 123323 29 100.0 32 ............................. ACGAGACGCGCGCAGCTCAGGCCGTCGAGAAC 123262 29 100.0 32 ............................. CAGCACAAGCCGGGCAGCCGACCGGGCCAGGA 123201 29 100.0 32 ............................. CCAGTGTCGAGAGCCGGCGGCGCGGCGCGACT 123140 29 100.0 32 ............................. ATGGCCTTCACTTCGGCCCGATTAAGCGGCCA 123079 29 100.0 32 ............................. CCCAAGGGCGGCCCCTTGTGTAAAGCGACAAT 123018 29 100.0 32 ............................. CACCCCACCACCATCGGCGTCGATCTCGCGGC 122957 29 100.0 32 ............................. AGAGGCCTCCGCGCACGCGGGGACGCCGTCGC 122896 29 100.0 32 ............................. TGCGCCTTGCGGCTGGGGAACCGCCCCTTCAG 122835 29 100.0 32 ............................. TGCCCGGCGAGCCCGCGGTGTGTCTTCTCGCG 122774 29 100.0 32 ............................. ATCGTCGACGCCGGCGGCACGGGCACCGACAA 122713 29 100.0 32 ............................. TGAGTCAGCACCGTTCCGAACGGCGTAGCGCG 122652 29 100.0 32 ............................. GCGGCAGCCTGGTCGGCGGTCTTCGGCATCGG 122591 29 100.0 32 ............................. AGGTGGTCTGTCTCGGCGCGTGGTCGTGACGC 122530 29 100.0 32 ............................. CGGACACCTCCACCGGGTCGCCGCCGCAGCCT 122469 29 100.0 32 ............................. GGCCGCGAGATGAATCTCGCGCAGGCTGATGC 122408 29 100.0 32 ............................. CGACGTTGGAGATGCTGCGCGAAGCCTCGGCT 122347 29 100.0 32 ............................. GGCACGCTGCCGCTGGTCGTGCTGCTGCGTCG 122286 29 100.0 32 ............................. ACAGCGTGATAGTGGATCGCGCCGCGCTTCTG 122225 29 100.0 32 ............................. ACACGCGCTTGACGCGCCGGAGTGCCCTCGAC 122164 29 100.0 32 ............................. TTCACGGTTGAACGGTCGATCCCGATCAAGAT 122103 29 100.0 32 ............................. AAGGCTTCGTCGACGACGACGAACGCCATGAC 122042 29 100.0 32 ............................. GGTATGCGGGCGCCCCATGATGGCTTCGACTT 121981 29 100.0 32 ............................. TCCCGAGGAAGGCGAAGAAGGTTCAGGCGACC 121920 29 100.0 32 ............................. AGCGCGAGGCGGGGTCGTGGACCTCAGGGCAC 121859 29 100.0 32 ............................. TTCGGGAGCTGACCCATGATCCCGCTGCCCGT 121798 29 100.0 32 ............................. TTCAGCGCGCTGTTGGTCGGGTTGAAGTCGCA 121737 29 100.0 32 ............................. TGGCCGACTGCCTGCGCATCGCGACGGCCCGT 121676 29 100.0 32 ............................. GAGGGGACGCTGGTCAGCGCCCAGCGGTCCGG 121615 29 100.0 32 ............................. CCAGCGCGCAAGCACCTGGCGCGCTTTGCCGC 121554 29 96.6 32 ............................G TCGGCTGAGCTGCTGGAGGCCATCGAGGAGAT 121493 29 100.0 32 ............................. GTAGAACGGCACGTTTTCCTGCTCGTCCGACG 121432 29 100.0 32 ............................. CCCGCGACGCAAGCCGCGCCAGCAAGCCCCCC 121371 29 100.0 32 ............................. TCGGCGGCGGAGACGGCGGAAGCGGCCGCCAA 121310 29 100.0 32 ............................. CAGAGAGCGTCATGTTGGCCATGGCTGCCTCA 121249 29 100.0 32 ............................. GACGAAGCCCCGCGCGTGGCGATGCTCGCACT 121188 29 100.0 32 ............................. CCGGCGCTCCACGCCTACGACTACGCACGCCG 121127 29 100.0 32 ............................. CGGCTTCGATGCACCTTTGAAGGCCCTTCGAA 121066 29 100.0 32 ............................. TACCCGGCCGGCAGCGGCACCGGCACCATCCG 121005 29 100.0 32 ............................. AAGCAGCTCACCGACGCCAAGCCGGGCGGCAG 120944 29 100.0 32 ............................. TGCAGCAGCTCGACCCGGCCGAGGCGCTACTG 120883 29 100.0 32 ............................. TTCATCCCGGCGCGAAGGCTTCCGTCCAATGG 120822 29 100.0 32 ............................. GCCGGCGGCGACGTCAGCTATGACAAGAACGG 120761 29 100.0 32 ............................. ACCGCCGAGGCCGGCACAGACGCATTCCGCGG 120700 29 100.0 32 ............................. CCTCGCACGAGGTTTCGATTGACCCGGATGTT 120639 29 100.0 32 ............................. GCGCCAGAGCGCCTGCGCCGTCCGCATACTGC 120578 29 100.0 32 ............................. GGCATCGCGCTGCTCCAGCCGACCCACGAATG 120517 29 100.0 32 ............................. AGAAGCGCCTGAAGCGCGAGGTCCACGAGGCG 120456 29 100.0 32 ............................. CCTTGTTGACGAAGGCGGGCTGCCCACTCGTG 120395 29 100.0 32 ............................. GACGAAAGGACTGCCTGAAAACGGGTGTTGGG 120334 29 96.6 32 ............................G TCGTCAGACCCCGGCACGCTGGCGAAGGGCCG 120273 29 100.0 32 ............................. CGGTCTCGGCGCCGGCCACCTTCATGCACCAG 120212 29 100.0 32 ............................. TCCTGACAAATCAAGTCGGCGTAGCCATCGGC 120151 29 100.0 32 ............................. AGCCCGGTCGCCGGCGGCGCGATCAACACCAC 120090 29 100.0 32 ............................. TCGGCGGCGGCATCTTCTCTGCATCCGTACTG 120029 29 100.0 32 ............................. GCGGCCATCTTCGCCCAGGGGCTGGAGCGGCG 119968 29 100.0 32 ............................. AGCGCCGGATTGTTGCCGGCCGCCTGGGCGCT 119907 29 100.0 32 ............................. TTCATCCAGTGACGACGCCCCCCCGTTCCGCC 119846 29 100.0 32 ............................. CCGTTTTTCTTTGCTGCGTGACTCCGTGCGTG 119785 29 100.0 32 ............................. TGGTCTTCGCACGGGAAGGGCGGAGCGATCAA 119724 29 100.0 32 ............................. CAACACGTTTGCGACTGCCATCAGCAATAGTC 119663 29 100.0 32 ............................. GGCGTGAGGCAAGCGTTCATAGGCTACTCCAG 119602 29 100.0 32 ............................. CACAAGGATTCACGCCATGCGCACTCTGGCAG 119541 29 100.0 32 ............................. GTCGCCGTGGGCTACATGGGCGACGTCTACGA 119480 29 100.0 32 ............................. ACCCGAAGGACTCGCAGGACACTCCCGAGCAC 119419 29 100.0 32 ............................. CTTGGTAGGCCAGGGTGGGGATGCCGATCTCC 119358 29 100.0 32 ............................. CTGGCGATCCTCCCGCTGGGCCTGTCGCGCAC 119297 29 100.0 32 ............................. CTCGCCGGCGTGGTGAACGACCTCGTCGGCTG 119236 29 100.0 32 ............................. TCCTGGTCGGTGCTCGGCTTCTTCGGGATGCG 119175 29 100.0 32 ............................. CGACTTGGCTCAGCGCTTGCGACACTGCGGCG 119114 29 100.0 32 ............................. GGCGCCTTCGCCGTCGCCGACCCGCGTTCTGG 119053 29 100.0 32 ............................. GTCGAGACGCCGGAGCTCGCGTGCCCTCTCGG 118992 29 100.0 32 ............................. AGCCCGGCAGGCTCGCTGGCGCGATCCCAGGA 118931 29 100.0 32 ............................. CGGAAAGGGGATCTCCATGAAGGGCCAGATCA 118870 29 100.0 32 ............................. CGCCGCGGCTCGCTGTACTCCGACGCGCTGAA 118809 29 100.0 32 ............................. GTCACCGGAAGTCCTTCACCAGCGTCGCGTAC 118748 29 100.0 32 ............................. ATGCCCCGCGTGCGGTGCGCACAGGTGGCGTG 118687 29 100.0 32 ............................. ACGAGGTCCCGGTCGGTCGGCGGCGCGACCGC 118626 29 100.0 32 ............................. CTGTCCGGCGCCTTGGTGCAGCCTGCGCCTAG 118565 29 100.0 32 ............................. GCCGAGGCGGCCAGCATCCGCGAGCACGTCCG 118504 29 100.0 32 ............................. ATGGCTGACATTCCGAACCGCCGAGCCGGTGT 118443 29 100.0 32 ............................. GGCTTCGCGCGTGGCTGATCGGCGCCGAGGCC 118382 29 100.0 32 ............................. CGTCAAGTCGTCGACGGCACCGGGAACCTCGC 118321 29 100.0 32 ............................. TCACGAAGCGCGCGCCGCACATCGGCGGGGTG 118260 29 96.6 32 ............................G CCGGCGTCAACGCCGCCGGCGGCCGTGCCGAA 118199 29 100.0 32 ............................. AAGGGCGACTTCATCGTGGCGCTGGGCCTGCC 118138 29 100.0 32 ............................. TGCGCAGCGGCCGATAGCGGCACGCTGCTCGC 118077 29 100.0 32 ............................. GGCTCGCTGGGGGCCGTGGCATCGGCCGCAGG 118016 29 96.6 32 ............................T GCAGCGCCAGACCGCGGCTTCGGATGCCCTCG 117955 29 100.0 32 ............................. TGCCGGCGGCGCAGAAGCTCATGGCACTGCCG 117894 29 100.0 32 ............................. ACCCGAAGGACTCGCAGGACACTCCCGAGCAC 117833 29 100.0 32 ............................. CAGCACGCGAGGGTGGATCACGGTGAGCTACC 117772 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 99 29 99.8 32 GGCTGCCCCGCGCGAGCGGGGATGGACCC # Left flank : TTGCCGCGGCCAAGCGCATCGAGCAGGGTGCCGACGAGACCGTGGACCGGCTCGTCCGGCAGAGTGCGGCGCGGGAGTTCCGCCGCATCGGCCTGGTGCCGAAGATGATCGACGACATACAGAGTCTTTTCGGGATCGCTCGCGATGGCACTGACGGTCGTGATCACGCGTGACGTGGACGACCGCTACCGCGGTTTCCTGGCGTCGGCGATGCTCGAACTGGCTCCTGGCGTCTATGCCAGCCCATCCCTGACCAAGGGCGCACGAGAGCGCGTCTGGGGGGTGGTGTCGGACTGGCACGCGCAGCTGGGGAGGGGCTCGATCACGCTCGTCTACCCGGACAAGCAAGCCGATGGCGGACTTGCCGTGATGCACCTCGGCGAACCCAACCGGAAAGTCGTGCGCATCGACGGCGTACTGCTGACGACCAAGGGTTAACCCTTGATCGCTTGACTGCTCCTTAACAAATTGACTTTGCGGATAGGAACTTAGGATTTAGG # Right flank : GCGACAACCGCCGGCCCCGCGCCTCACCCGCGCCGCCGCCCTCCCGCCCGCTCCCGGTGCAGCCAGGTCAGGCCCGAGGACGTGCCCAGCGGTTTGCCGCCGCGCGCGGGCCGGTACTCGCAGCCGATCCAGCCGTCCCAGTGCCCCTGTGCGGCCAGCTCGTCGATGAGCTCGAAGAGGTACGGGTAGTGCACCTCGCCGCGGTCGGGCTCGTGGCGTTCGGGCACGCCGGCGATCTGCAGGTGGCCGACCTGTCCGCTGGGCAGCCAGCGGCGCAGCTGCATCGCCAGGTCGCCCTCGGTGATCTGGCAGTGGTACAGGTCCATCTGCACCTTCAGCGCGGGCGAGCCCAGGGCCTGCACCGCGTCGTGCGCGTCCTGCTGGCGGCTGAGGAAGTAGCCCGGCATGTCGCGCTGGTTGATGGGCTCGATCAGCAGCGTGCAGCCGGCAGCCGACGCGCGTGCCGCGGCCCATGCGAGGTTGTCGTGCCAGAGCGCCAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTGCCCCGCGCGAGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA //