Array 1 1574568-1573618 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJMWO010000001.1 Mycobacterium riyadhense isolate MR-244, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================================================================================================================================================= ================== 1574567 29 89.7 46 .....A......T.....C.......... CCAGCGGCGGCAGCGGCGGCGCCGGGGGCAGCGGTGGATCGCTCTA 1574492 29 89.7 43 ............G.....C.......C.. GTGCCGGCGGCATCGCCGGCAACGGCGGACCTGCTGGGCTGAT 1574420 29 89.7 46 ...............G..C....T..... CCGGACACGGCGTCGGTGGTGCGGGCGGTCAGGGTGGATTGCTCTA 1574345 29 100.0 43 ............................. GCGTTGGCGGCATCGGCGGTCAGGGCGGGGCGGCCGGGCTGAT 1574273 29 89.7 46 ............C.....C..T....... CAGGAAACGGCGACGGCGGTGTCGGGGGCCAGGGTGGATTGCTCTA 1574198 29 100.0 43 ............................. GCGTTGGCGGCATCGGCGGTCAGGGCGGGGCGGCCGGGCTGAT 1574126 29 93.1 46 ............C.....C.......... CAGGAAACGGCGACGGCGGCGACGGCGGCCTCGGCGGATGGCTCTA 1574051 29 100.0 43 ............................. GTGCAGGCGGGACCGCAGGTCAGGGCGGGGCGGCCGGGCTGAT 1573979 29 79.3 241 ...............A..C..A.TG...A GCGGCGGCGGCGACGGCGGCGACGGCGGCAGCGCCGGACTGCTGTACGGCCATGGCGGGGCCGGCGGCAATGGCGGGTCCGCCGCTATCGCCGGCCAAGCCGGCGGGGCCGGCGGGGGCGGCGGGTCGGCGTCGTTGTTTGGTCAGGGCGGTCACGGCGGGGCCGGCGGGACCGGGGCGGCCGGTCAGGCCGGCGGGCGCGGCGGTTACGGCGGTGCCGGTGGGTGGCTCGGCGGCAATGG 1573709 29 72.4 34 ...G.T......T..T..C...GTG.... GGGCCGGCCTCGAAGGCCTCGCCGCCGGAACCGG Deletion [1573647] 1573646 29 69.0 0 T..T.A......CT....C...GC....C | ========== ====== ====== ====== ============================= ================================================================================================================================================================================================================================================= ================== 11 29 88.4 63 CGGCACCGGCGGAGCCGGGGGCAACGGCG # Left flank : TCGTCGTTTGTGATCGCGACGCCCGGATTCTTGATGGCGGCCACGCAGGACTTGACCACGATTGAGCAGGCGGTTGGGGCCGCCAATGCGACGGCGGCCGGCTCGACGACACGGGTGCTGGCCGCCGCCGAAGATGAGGTGTCGGCAGCGATCGCAAGGTTGTTTGGCGCCTACGGCTACGAATATCAGGCGCTGAGCGTGCAGGCGGCGGTGTTTCACGCCCAGTTTGTGCAGGCGCTGGATGCCGGTGCTCGGGCGTATGCGGCCATGGAGGCCGCCGCCGCCGCGCAGTTGCAGACCCTGGGGCAGGACGCGCTTGGCCTGATCAACGCCAACACCCAGGCGGTGCTGGGCCGCCCGTTGATCGGCAACGGCGCTGACGGGACGGCCGCCCGCCCCGACGGTGGGGCCGGCGGGCTGCTCTACGGCAACGGCGGCAACGGCTATTCCCCAGCGGTAGCCGGCGGTTCCGGTGGTAGGGGTGGGGCGGCCGGGCTCGT # Right flank : GGGCCCTGGTGGGCTGGTCAGGCGGGGCAGGTGGGGCTGGAGGCGCCGGCGGCGCGGGTGCTGACGGGGTCGCGGGTGCTCCCAATACGAGCGGTGTAGGCGCCGCGGGCGGCACCGGTGGCAATGGCGGCATCGGCGGCGTGGGTGGTGCATCCAGTGCGCTGCTGTTCGGTTCCGGTGGTGTCGGCGGTGTCGGCGGTGCCGGCGGGGTAGGCGGCTCGGGCGGCAACGGTCTTACCCAGGTCGGTCTCAATGGCGGCACCGGCGGCACGGGCGGGACGGGGGGTAATGCCGGGGCGGGCGGGGCTGGCGGGGCCGGAGGATTTTTCGGGACATCCGGGGATACGGGCGCCGCGGGCACCGGTGGTAGCGGCGGCGCCGGGGGCAATGGCGGCGACGCCGCGGGAGTGGGCCCGGGCGGCGCCGGTCTACGCGGCGGCGACGGCGGCCAAGGCGGTCAGGGCGGTAGCACGGGCCTCGGAGGCGTCAACGGTAACGGC # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGGCACCGGCGGAGCCGGGGGCAACGGCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [20.0-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 2 4219144-4214779 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJMWO010000001.1 Mycobacterium riyadhense isolate MR-244, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 4219143 36 100.0 36 .................................... CACTGTTGACGAGCTGTACAAACTGGCCGGACTCTT 4219071 36 100.0 37 .................................... ATCAACAACGCGCTATCGCTGAACCCCGACGTGCGGG 4218998 36 100.0 36 .................................... GCGAGGAACGCCTGGATTGCCTCGTGGTCGAGGGCT 4218926 36 100.0 36 .................................... GATAGATCCGGCCGCGAACTCGGTTCATACGCTGAT 4218854 36 100.0 36 .................................... GACCAAGCTCAAGGAGCTGATGCTCAACGCCTTCAG 4218782 36 100.0 38 .................................... TACGACGAGCTGATGGGCACCGCATGATAACTAAAGAG 4218708 36 100.0 35 .................................... GCTTCCACAGCCGAGGAAGTCGCGATGACGAATGA 4218637 36 100.0 36 .................................... ACCGAAATGCGCGGGTGAGGCGTCGTCCGCGGTCTT 4218565 36 100.0 36 .................................... ACCAACCGCAACGCCGAAGACATGTACAAGGAATGC 4218493 36 100.0 36 .................................... GTGGAGATCAGCTCCTATCCGTGGCAACGCCGGGTT 4218421 36 100.0 38 .................................... GTGAAGCTCGGCATCGGTATTGCGCCGGGCTGGCAGAG 4218347 36 100.0 36 .................................... GCCGAACGCATGATGATCGCTATACCCAAGGCGATC 4218275 36 100.0 36 .................................... GAAACCCCGAACGTCATCAGGGCTTACCAGGTGCAC 4218203 36 100.0 39 .................................... CAGCTTGTACGGCTACATCGACGCAGCACTTGAGGGCTG 4218128 36 100.0 35 .................................... CTTATGGTGGTCGTGATGGATTGCGGCGCAAACAT 4218057 36 100.0 38 .................................... GGCTTCAATCCGCCAAAGCAGTATTCGGCCACCTACAC 4217983 36 100.0 36 .................................... GGACACGTTGCCGCTGTCAACGACGGAACCCATCGC 4217911 36 100.0 38 .................................... AGAAACCTGCGCCGCGCCATCGACACCTCCGTATACGC 4217837 36 100.0 35 .................................... AGGATCATTTCGGGCTTGCCGGTGTCATTGACCGG 4217766 36 100.0 38 .................................... CTGGCAGGGCCGCTGAGCAGACTCCTGGGCGGTCTCCT 4217692 36 100.0 37 .................................... AAGTTCGCCAACGCCCCATTTGGTCTCTCCCGTCATC 4217619 36 100.0 37 .................................... ATCGTGCTCCTGGTGCAGGGGTTCTTGACGGCGGGTC 4217546 36 100.0 35 .................................... CCGCAGTGAGCGCACTGACGCGCGGCCATCAGTGT 4217475 36 100.0 35 .................................... AGGAGCGATCTTCACGGATCACTTGGCCTGAACCT 4217404 36 100.0 36 .................................... GTCGCGAGTCTGGTACCCCTGGGGGGTTTGATTTTT 4217332 36 100.0 35 .................................... AGGATCGCGGCGTTACGGGTGTCCGCCTTGGCCAT 4217261 36 100.0 36 .................................... ATTTCTGCGCGTCGGGTCGCGCACCAGCGCAGGATC 4217189 36 97.2 36 ....................T............... AATATGCCGATTAAGATGACCAAGCACCTCCCGATC 4217117 36 100.0 35 .................................... ATCTGTATCGATGAGCCCATACGTGGACGGTGGAG 4217046 36 100.0 37 .................................... AACATCGGTGTGCGCCATGGCGGGCCGGGCGGTGGGC 4216973 36 100.0 35 .................................... AATCACTGCGGTCGTCTTCAACGACGGCGGCTTTA 4216902 36 100.0 36 .................................... ATGGACTCGATGCGCACCGGCATTGATTTCCAACGC 4216830 36 100.0 33 .................................... CTGATGTCGCTGACAGGGTGCATGTGGTTGCAC 4216761 36 100.0 35 .................................... TAAAAACGAATTTACTACAATTTCTGCCGGTCCCT 4216690 36 100.0 37 .................................... AATAACATGCAATGCCCAGTTTGTGTTGCCGTGCCAA 4216617 36 100.0 36 .................................... AATCAACCCGGCTAAAGCCAGTACGTCGGGGTGATG 4216545 36 100.0 37 .................................... CGATTTTCCGACCTGCAGTGCTACCCTTGGAAACCAT 4216472 36 100.0 36 .................................... TTCCCTACTCCTGTGGCGTTCCAGTAATGAGTGCGA 4216400 36 100.0 37 .................................... AAGGGGCCGCTGGGGCCATCGGATCTATCGCCGCCAT 4216327 36 100.0 37 .................................... CGGAGTTATGGGCGGAGCGGACGCAACGGCGGCCCGT 4216254 36 100.0 35 .................................... TTAATCATAATCATGATTAATTCTATTTGGTATCT 4216183 35 97.2 36 .................-.................. GTACACCCCGAAATTGGATTGCACGTTGAATCGCAC 4216112 36 100.0 37 .................................... AACACCACCGGTGCGGATGCCCGCCAGGACTCCGAGA 4216039 36 100.0 36 .................................... CTGCTCACGCACGCCAAAGGCCGCGCACACGACGAA 4215967 36 100.0 35 .................................... CCAAATTGGAAATTGGTAAGATCGTCGACACCCTG 4215896 36 100.0 36 .................................... ACGTGAAGGCGGGGAGGCGGACGCGGACGTTGTGAT 4215824 36 100.0 36 .................................... AGCGATCTCGTGCTGCGTCCTCCCCAGTGAGGCGGC 4215752 36 100.0 37 .................................... TCGAAGAACCATTTTGCAACCTGTTCACGGGTGAATC 4215679 36 100.0 36 .................................... ACAGCGGGTACACCGTATCCACTTCATTGAGGGTTC 4215607 36 100.0 37 .................................... GGATTCGTTGCCGCGCATGGCCAACGCACTGAAGAGT 4215534 36 100.0 34 .................................... AGAATGTGGCAGGCTGGTCGGAGCGCGTTGGCAA 4215464 36 97.2 35 ..................C................. CGCCGTCCGTTCCGCCGTCGATTCCGCCGTCCGTT 4215393 36 100.0 38 .................................... CGCGACACCTGCACCTGCCCGGACCCCTGGTGTCCCGT 4215319 36 100.0 38 .................................... GGATTCGACGCCGGCAGTGGCCGGCCGGGTGCGGCGAT 4215245 36 100.0 35 .................................... TTCGTTGGGGATGTCGATGATGATGTCGTCACCGT 4215174 36 100.0 38 .................................... GAGCGGCCCGCCGCGCTCTACCGGTACCTGATCAGCAA 4215100 36 100.0 36 .................................... ATGTTTGCCGTCGACGGTGTCGCTGTTGCGGCAGTC 4215028 36 100.0 35 .................................... GAGGAGCATGGTGGCGAGCTTTTGCTGGGCGGCGT 4214957 36 97.2 37 .........................G.......... CAGTCGCCCGGACAGTTTCACTTCGCCGCGCAGCAGC 4214884 35 91.7 35 ...................T.........C-..... TCGCTGGTGTGGATGTACAAGTGACGGTTGTCAGC 4214814 36 83.3 0 .........A.....A...TG...........TC.. | ========== ====== ====== ====== ==================================== ======================================= ================== 61 36 99.4 36 GTTATTCCGGTCATTTTGGCCGGACACCATTGAGGC # Left flank : CTGTACTGGCGCTGCACCCCGACGCTGTGCACGCCCTTCTTGACGTCACCGGTCTCGTCGACCACCAAGATCGCACCCGGGTCACCGAACGCATCGACGACGTAATCGCGCAGATCGTCGCGGACATCGTCGGCGTCCCAGCTGGCCCGTGCCAACAGATGCTGCAACCCATCGGGGGTGGTATCACCGCGGTGCTCGGCGATCGTCCAGCAATTCTTGCGGTCCAAGCCCGAGACCATCCCGGCCATGAGTTCACCGGCACGGCGCAACGGTTCGTACCGGGCGAAACGCGGCGCGATCCGATCCAGCACCGCCGAGAACTCCGACTGCCACCGATCAGGGTCTACGCTATGAGCCGCGGCGACCGCGGCATATTGAGAAGTTGTCACAAACTCCGAACAATGCCGCGGTCACCGCGCCTACCAGCGCAGACACGCCAGCATCAGCAATCCCTATCTACGGCTGCAGTATTAGGCGATGGTAATGGTGGGTTAGTTGTC # Right flank : ATTAGTTGGCGGTCGGGATCTTTACCAGACGAGATACATTATTCATGGCTGCCCGGGTCCGCAGCGCCGTCGGGTGATCCGACCGGTAACAACACCCGCGACTGTCCGAAATGCACCGCATGGGTTGCCGGCTTCACCTGCCGGCCGGTCCCGAGTTAGGACAATTTAGTGTGCATGGCCGCCATTGATCTTGGCGATGACGTCGCGGAGGTCATCGGGTAGCGGGTCGACAGCGGTCAGGATTTGCCTGCCTGCTTTGATCTGTACGGTTCGGAAGCGGCGTGCGGTTCGTACGAATTTCTTGATGCTCCAGCCGGTTTGGGTCTCGATGTAATGACTGACGGCCAGGGCGGCGAACACGATGGTCAGGTGAGCGTCGATGGATTCGCGCTTGTGGTGGTAGATGGGCCTGGCCTGCAGGTCGTGCTTGGACATCCGGAAGCTCTTCTCGATGCGCCAGAGCTGGTGGTAGGCGCCGATGACGAACTCCGGTTTCTGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTCCGGTCATTTTGGCCGGACACCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 4220613-4224390 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJMWO010000001.1 Mycobacterium riyadhense isolate MR-244, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 4220613 36 100.0 36 .................................... CCGGTCACCGCGAATGAACAGACCAATATGACCAAG 4220685 36 100.0 35 .................................... CAGACACGACGATTGTGCAGGTACGACGCCAACCC 4220756 36 100.0 36 .................................... CCGGCAAGAGCTGATGTGGCGAGACGCCAACAACAC 4220828 36 100.0 36 .................................... ATTTGAATGTGGAGGATATGTGATGGCTGATATAAC 4220900 36 100.0 36 .................................... GGGCAACGAGCGCCGCGGCCAGCTCTCCCTGATCTC 4220972 36 100.0 36 .................................... GTTCTTCGACTGATCCGAGACGACTCCGCTATCTGA 4221044 36 100.0 36 .................................... GAGCTTGCGAGCGCGCTGCGGCTCACTCATGACGCT 4221116 36 100.0 35 .................................... GCGGAATTCTTCGCTACCGACAAGGCCGCCGACTT 4221187 36 100.0 36 .................................... CGGCGCCGACTGAACCCGGTCTCGTGGCAGATGAAG 4221259 36 100.0 37 .................................... CGCCCTCGACGGCGCACAACGCACCGGCGCCCCACCC 4221332 36 100.0 35 .................................... CACCGCACCGCCGTCATGTCCGTCCCGCTACGGTC 4221403 36 100.0 36 .................................... CGATGTCGCCAGCGCCTCCTAAGTAGATAGTCCCAT 4221475 36 100.0 37 .................................... ACGCGGAACAGCGATGGGGCCCGCTGTCTCCGTCCTG 4221548 36 100.0 35 .................................... CGGAAGACCGCCCGAGAGGTGTTGGGAGATGTCCG 4221619 36 100.0 37 .................................... TTGTACAGGCGCTAGGGGTCGTGCAACCAACCTTATG 4221692 36 100.0 37 .................................... CTCAGCGACTTTTCGAGTCGTTCCGCTCCCTGCGCCG 4221765 36 100.0 36 .................................... GCTAAGCGGCCGAGTCGGCCCCGCGGGAAGAACACC 4221837 36 100.0 35 .................................... CATTGCTTGCCGCGATCCTTCTGGTAAGTGACTAT 4221908 36 100.0 36 .................................... AGCAAGGATTGCTGTCCGTTACCCGGGCGTATCCAA 4221980 36 100.0 36 .................................... GCGGGGCGTCGAGTGGGGTGTCAGATCGCCACGCCG 4222052 36 100.0 37 .................................... CCGCGTGCCCTGGGGGACGCGGTAGAGGCGGATGCCT 4222125 36 100.0 36 .................................... GCGTTGTCGACGAGCGCGGACAGCTCACCATCGCCG 4222197 36 100.0 35 .................................... GAGGTTGACGACCGCGCATTCATCGCTGTACTGGA 4222268 36 97.2 35 A................................... CCGGGAACACCTACACCGGGTGCACCAGGGATAGC 4222339 36 100.0 36 .................................... GGCGATGCCCAGGGTGGCCGATAGTGCGTACCTTTT 4222411 36 100.0 37 .................................... TCGGGACGCGGGGGTCGTACCCCCCGCCGCGATGGAC 4222484 36 100.0 36 .................................... GCGCTGGCTGGGTGAACGCAGCTCGATCGTGATCTG 4222556 36 100.0 36 .................................... CTTCCGCACCATCGTCTGATGCATCTTCCCGAGTTT 4222628 36 100.0 36 .................................... CCGATGCTGCGGCCGGGCTGCTACGTGGTGTTCGAC 4222700 36 100.0 36 .................................... GTACAACGGTCGGCCGAGTGACGGCGCGAAGTCTCT 4222772 36 100.0 35 .................................... TCGCGGTCTTGTTGAATGCAAAAGTCACCTTGCCC 4222843 36 100.0 35 .................................... AATGGTTTGATAACGAGTCCGACACCCCCTTTGGG 4222914 36 100.0 37 .................................... TCCGGCGCTGGCTCATTATCTGCGGTCGCCCGGTCAT 4222987 36 100.0 36 .................................... CGGCACCCCGGCCTCATGCGCGACAATGTACACGCC 4223059 36 100.0 36 .................................... CGACATGCGGTGACGGCGGTGTCATGTTGTATTGGA 4223131 36 100.0 36 .................................... AAGAACGGCCTGCGCGGAGATGTTCTTCTTGAACGG 4223203 36 100.0 35 .................................... GCAGTTGCCTTGGGACGCAACGACGACCGGTCATG 4223274 36 100.0 37 .................................... ATTCGCAGGTTGCAGCCGGTTCTGACCAGCAGGTTTG 4223347 36 100.0 36 .................................... CCGGATCAGGCGATGGCCGCTGCACGCGGTGTGATG 4223419 36 100.0 36 .................................... CTGTACAGGAATTGGAGCATGAGAACGCGATACTCG 4223491 36 100.0 36 .................................... CAACGCAATGAACACCGAAGACTCCCCGGCACATCC 4223563 36 100.0 37 .................................... GAGGCTATCCGGCCGCGAACGGGTTGTCGTCGTCGCT 4223636 36 100.0 35 .................................... TCGGGGATGCCGACCGGAATCGTGACCGGGTTGAC 4223707 36 100.0 36 .................................... ATGGTTGCTGGGCGGAAGCCGCGGCCATCAGCGCTA 4223779 36 100.0 36 .................................... ATGGCCAGCACAACACATAGCGATGATGTCGCTGCA 4223851 36 100.0 36 .................................... ATCAACGCCCTGGACACAGGGGTGGATGAGCATGCC 4223923 36 100.0 36 .................................... GGGGCCTTGTGGTGGGACGATGCCGAAGAATGACTG 4223995 36 100.0 36 .................................... CTGCGGTCATCAACGCCAGCACAACCCCATCTAAGG 4224067 36 100.0 38 .................................... CGGCATTCGTCCCAATAGGTGTGTGCCAGATGCCGCTC 4224141 36 100.0 35 .................................... CCGATGCGCGCCAAGTCTGCGGCGGCGCTGGTGAT 4224212 36 100.0 35 .................................... GCGGTAGGACCCATCATTTCAGCAGCTCAAGCGCC 4224283 36 100.0 36 .................................... CGTGCTCACGCCAGACGAAGATCGGGGCCGTTACCC 4224355 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 53 36 99.9 36 GCCTCAATGGTGTCCGGCCAAAATGACCGGAATAAC # Left flank : GCCGAAGACGACACCGACACCGGGTACCATCATTTGCTGATCCGCCGCAACGATGCCACCGGCGAGCATGCCTACCTGCGCTGCTACAGCCCCCGACCCGTTCCGCTGCGCACCCTGGTCACCATCGCCGGTCAGCGCTGGCGCATCGAGGAATCGTTCCAAGCCGCCAAAGGACTGGTCGGACTGGATCAGCACCAGGTGCGGCGCTGGCGCTCCTGGCACCGCTGGACCACCCTGGCCATGCTCGCCCATGCCTTCCTGGCCGTAGCCACAGCGATCGAACGCGATACCGCACCCACCCCCGAGGGCCTGATCGCCTTGACCGTCAACGAGTTTCGACGCCTCTTCGACGCACTGCTGCTCGTCACCCACCGCACCCTAACAAGCCTGCTGGCCTGGTCACGATGGCGAAGACGACACCAATACCGAGCCCGACAATCCCACTACCGACGCCGCGAACACCAATGATCTCGATCTACGGCTGCAGTACTAAACCAAAC # Right flank : CGGCTCGATCAATTACAGCCCCGTGACCTGGCATAATACACGACACCGCGAGCGGTGAAGGTTCCAGCATCTGCGGCGCGTTTGACGGTCAGGTGCTGCGTCTACCGCAACGTCTCCCACCAGGCCGCGAGCGCTGCCCCGGATCTGCCCCTTCATATGGCCGCTCGCAGCTTCATACGATCTGCGGCCCGTCCGTAGGAAGGCAGCGGCGACGACCGATCTGTCGTATAGTAGCTGCTGAAAACGTGGGGCCTAGGTCGATTCGGACGACGCTGTCTTGGACGAGATGCATCACAGCGGTCACGGCGGCTTCAAGTTCCGATAGCTCCGCAACGCTGAGGTCGCATAGAAATACCGAATATTGCAGTCGCTCACCGTGGTCCTCCATCAGGTTGCACACTCGTCGCAGTCGTTTGGGATCGGCGATGTCGTATGCCAGCAAGTACCGACGTCGCGTCATCTCGTCACCATTGGGACATACTCAGGCAGCTCACCGACGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGTGTCCGGCCAAAATGACCGGAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //