Array 1 1705-2996 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCZM010000035.1 Streptococcus infantarius subsp. infantarius strain P4324CNA2 KS53.ct_NODE_71_length_16805_cov_545.491_ID_33094, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1705 36 100.0 31 .................................... CAAGCTTTTGCAAATAAACCACCTCTTACTG 1772 36 100.0 30 .................................... TTCATTCTGGCGTAGTAACTCATAACCATC 1838 36 100.0 30 .................................... TTACAAGCGATAATATACATAAGGTTGTTC 1904 36 100.0 30 .................................... CGTTGGACGTGCTGGAGGGTTTTGTTAATT 1970 36 100.0 30 .................................... CGCTGAACTTGAAGGTATGAAAACAGGATA 2036 36 100.0 30 .................................... ACAACGAAGTTACCTGTTTCATACCCATCA 2102 36 100.0 31 .................................... TGAAAGCAGTTGAAAAAAGCATAGCTGGTCA 2169 36 100.0 30 .................................... TGTAAGGCTTGAAAAGGTTGTCCCACTCTT 2235 36 100.0 30 .................................... ACTATTGGGTTTTGAGGTGACCACTTAAGA 2301 36 100.0 30 .................................... CATGTTAACTCCTTTTTCCGCGTCCTCGAT 2367 36 100.0 30 .................................... CTAAGCAGTATTTGAAGAACCGTATCTTAA 2433 36 100.0 30 .................................... GTGATTTATTTATAGAATTAACTGAGCGAG 2499 36 100.0 30 .................................... GGTTTGGAGAGTTCCAGATGAACCTTAACA 2565 36 100.0 30 .................................... ATATTCAGATTCTAAAGGATATGTATATTC 2631 36 100.0 30 .................................... TAACGATGGCTATCCGTGGTTCTAGCCGAA 2697 36 100.0 30 .................................... GAATATGTTAAGCAGCGTGAGACATATAGT 2763 36 100.0 30 .................................... TTAATTGCAAAACGTTTTACAAGCGACGTG 2829 36 100.0 30 .................................... AGCTCATTTTCTCACCTCCTTTCTAGCGCA 2895 36 100.0 30 .................................... TTAAGAACAATCAAGGGACAACCAATTTGA 2961 36 86.1 0 ..............................TG.TGA | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.3 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : TTTTCATAAAGAAAAAGATGGAAGCTATTGGGTTGAATTTCCGGGTTTTGGTGGTGGAACAGAAGGAAGTGATGTCGAAGAAGCAATGAAAAATGCTCGTGAAATGTTAGAAAATTCACTAGCTGTTTACTTAGATGAGGGACTAACGCTGCCGAAAGTTATCGATATGAATGAACTATCAGTTTTTGACGGGTTTATTTCTTTGATTCAGGCAGATCTGTCTCCTTAGTTAAAAAGTTCGAAAGCTATTCGAAAAAATGTTACAGTTCCAGAATGGTTAGTCAGATTAGTTGATCGTGAACACATCAATTATTCAGAAGTTTTAACCCAAGCTTTGGAGAAAAAATTGCAACTGTAAATTATATGAATGCTTAGAAACATTGAAATAACGAGGCTTTTAAGGTATAATAGAGCTAACATGAAGGAGCTATTCGAAGCTGAAGTCTGGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAAATAGTCCACGAG # Right flank : ATTTTTTTATCCATGAAAATCAACCAAAACTTTAGTGAAAATGTCTTTCAACGTTTTTCAAAAATTTACTTTTATGGTAAAATTGAAAGTGAATTTATTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGTGTGAAACGCGGACTTGTTGGTGAAGTATTACACCATATCGAACGTCGTGGTTTCAAAATTGAAAAATTGGAAATGCGTATGGCAACTCCAGAATTGCTAGAAAAACACTACGAAGACTTAGTTGACCGTCCATTTTTCCCATTAATCGTAGACTTTATGACAAGTGGTCCGGTGATTGCTGGTGTTATGTCAGGTGAAGAAGTGATTTCTTCTTGGCGTACAATGATGGGAGCAACAAACCCTAAAGAAGCTCTTCCTGGAACAATCCGCGGTGACTATGCACAAGCACCCGCAGAAGGAGCAGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //