Array 1 223928-225415 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCMZ010000003.1 Klebsiella pneumoniae strain 1464e NODE_3_length_410268_cov_19.183456, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 223928 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 223987 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 224048 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 224109 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 224170 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 224231 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 224292 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 224353 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 224414 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 224475 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 224536 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 224597 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 224658 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 224719 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 224780 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 224841 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 224902 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 224963 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 225024 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 225085 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 225146 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 225207 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 225268 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 225329 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 225387 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //