Array 1 53399-51842 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTHF01000034.1 Streptomyces sp. ZL-24 scaffold34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 53398 29 100.0 32 ............................. GAGATCATTCCCTGGGTCCGGGCCCACGCCTC 53337 29 100.0 32 ............................. CTTCCACCGCGCATGGCCGGTTGACCTTCCGG 53276 29 100.0 32 ............................. CCGGGACCAGCCCCGTTTCTCTGTCGACTGCT 53215 29 100.0 32 ............................. TACCCCACAACCACAGCCTTGTCACCCGACAG 53154 29 100.0 32 ............................. GCGTCCGGCGTCCAGTTCTTGTAGCCGTGCCG 53093 29 100.0 32 ............................. GTGGACGTGTTCGGCAAGCTGACCGCCGGGAA 53032 29 100.0 32 ............................. CGCCGGGCCCCATCGGGGACGACTCATCGGCC 52971 29 100.0 32 ............................. GGCACCGGGACCGTGACCTTGCAGACCGGTGA 52910 29 100.0 32 ............................. TGGTAGTCGTAGAGCGCCTGCCCGGAAATGTT 52849 29 100.0 32 ............................. TCCAACCCGAACGCCCGGACGCCATGGCGCTG 52788 29 100.0 32 ............................. CCGACCCCCGCACAGACGGCCGGCCTGCTCCT 52727 29 100.0 32 ............................. CCCGACAGCGTGGAGGACCGCCGGTTCCGGAA 52666 29 100.0 32 ............................. TCGCCCGGATCGGTGCCCTCGACGTTGCGCTT 52605 29 100.0 32 ............................. CAGGAGTCCGGCGGTAACCCGCGGGCGGTCAA 52544 29 100.0 32 ............................. AACCGGATCGCCGCGCACCGGGCGCGGGTGAA 52483 29 100.0 32 ............................. CTCGCCACGCTCGGCATGACCGTGGGCGTCTT 52422 29 100.0 31 ............................. GATCCCGCTCCGCCCGGAGCCGGACGTTCTC 52362 29 100.0 32 ............................. CAGGAGAACCACATGACCACGCTCGCTTTCAT 52301 29 100.0 32 ............................. GGGTCCGGCACGCAGGTGGGGTGGGCGGTCTG 52240 29 100.0 32 ............................. GCACCCCGAGCCGCCCGTCCCCGACACGTCCC 52179 29 100.0 32 ............................. AGGCCCTTCGTCGTGCTGGAGACCGTGGTGCT 52118 29 100.0 32 ............................. ACGGAAGGCCGTCCGTCCCCGCCGACTTCGTA 52057 29 100.0 32 ............................. AGCTCGTGCGTCCGACCGCCGATGGTGCCGAT 51996 29 100.0 32 ............................. AACGCGGTGCTCGACGGGATTCGAGTCGTGGC 51935 29 100.0 32 ............................. CTGATGTGAACCGCTCGACCGGGTGGCACCGG 51874 29 89.7 0 ........................G..GG | A,AAA [51846,51849] ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.6 32 GTGGTCCCCGCGCGTGCGGGGGTGATCCC # Left flank : TCCTCACCAACTGCCCGGTCGGCCTGCGGGGCTTCCTCACCCGCTGGCTGCTCGAGATTTCGCCCGGCGTCTTCCTCGGCGCCCCGTCAACCCGCATCCGCGAACTCCTGTGGGCCGAGGTCCGCGAGTACGCGGGCCAGGGCCGCGCTCTGCTCGCCTACCAGGCGAACAACGAACAGGGCTACGCCTTCGAAACCCACGACCACGCCTGGCACCCGACCGACCACGAGGGCCTCACCCTGATCCACCGCCCGAGCGCTGATGCTGCACGCCCCGGAAAGACGTCGCCGTCGGCCGAGGTGCCCAGGCAGGGGTGGAGCAAGGCGTCGAAGAGGCGGAAGTTCGGTGGGCGGTAGGGGCTGGGGGACGCACTGGGCGGAGCAGCATTGTCAGAGGTTCAGGGGTCCGGGTGAGCACTAGGGGGAATATCCGCTATGCCCGAATCTGAGAAAGTGAGTAAAAACAGGCTCCGGTGCCGATAACGCCACAGGTCAGCAACT # Right flank : GGGAAGCGGCATCGGGGGGACAAGCCGCTCCCCCCGATGGGAACAGGGGCCCGGTCTGCCGTCGCGGTCAGGGGGGTTCGCGCGGCGGTAGCCCACAGTGGGTGCCTGTTCCGAGGGCTCCGGATTCCTGCCAGGGCCGGAGGCCTCGGGATCCATCGTGCCAGGGCGCGGAGGCCGTTTCCGTGGGCAAAAGGCCCCGATCGGCGGGTCGTAAGGCCTTAAAGAGGGCGTCAGTGAGGTGGAGCAGCCACTGGATACGGCCATACGTGCGGATACAATCTGCCGATCGCACGCTGGGTTCGGGGCGGGGTCTACGGGGAGGCAAGGGCAGTGGCGCAAGCGAAGAAGATCGCGCTCTACATAGTGGTGGTCTTCGTGCTGTACACGATCATCACCTCTCCCAAGCGGTCCGCCGAGCTGGTGGGGGTAGGGTTCGAGGGCGTTTCCAGCGCCGCCCAGAGCGTCGGCGACTTCATGACCGAACTGGTCAAGTAGCGAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 65523-63922 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTHF01000034.1 Streptomyces sp. ZL-24 scaffold34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================================================================== ================== 65522 30 96.7 31 .............................G CGCTACAGTTTCGGCACGGCCCGGACGGGTC 65461 30 96.7 31 .............................T GGTCGGTGAGGTCGACGGTGGCGCCGCCGAC 65400 30 96.7 31 .............................G AGGCCGAGGGCGAGACCGCCCGCCGTGTCGG 65339 30 96.7 31 .............................G CGGGCGGCGCGTGGGTCACCAGCAGCGGTGA 65278 30 100.0 31 .............................. CCGGGCCGGACCGGCGGATCACCAGGAAGGG 65217 30 96.7 31 .............................T GGTCCATCATGTCGCCCAGGTACCGGGCGCT 65156 30 96.7 31 .............................C CGGCCGCGTCGACCCGGCCGTTGTAGCGGGT 65095 30 96.7 31 .............................G CCATGTGGCACGCCTCGCGCGCCTGCTCGGG 65034 30 96.7 31 .............................G GGTTCCTCGTCGAGCTGGCCAACCCCGGCGA 64973 30 96.7 31 .............................T CGTCGTCCTCGTACTCCTTCTTCCGGCGCTT 64912 30 96.7 31 .............................T ATGACGTCCAGGGCGACGACCTTCCGGACTA 64851 30 96.7 31 .............................C GGACACCGAACTCGGACTCCTGGAGTAACCC 64790 30 100.0 31 .............................. GCGGTTGGGGCTTCCGCCGGGCAAGGGGTAG 64729 30 100.0 31 .............................. CCCCCTCAGGGAAGGTGGGGATTCCGAGGTA 64668 30 100.0 31 .............................. CGGCCGTCACCAACGTCCACTACCTAGTGAC 64607 30 100.0 31 .............................. GCGGTTGGGGCTTCCGCCGGGCAAGGGGTAG 64546 30 100.0 31 .............................. CCCCCTCAGGGAAGGTGGGGATTCCGAGGTA 64485 30 100.0 31 .............................. CGGCCGTCACCAACGTCCACTACCTAGTGAT 64424 30 100.0 31 .............................. GCGGCAGCGACGGACTCCCGATCAGCGTTGG 64363 30 93.3 31 ............................GT CCACGAGCCCGCGATCTGCCGCCGGTTCGAG 64302 30 96.7 31 .............................C CGTCCAGGTCCGGGACGACCGTGACCTCGAA 64241 30 90.0 30 .......................AT....C ATGAGGTGGACGACGGCTTTCCGTGGGCCG 64181 30 96.7 31 .............................G AACTCGACCTCCTCATCAAAAAGCTGGGCGA 64120 30 83.3 91 ..............T.......AA....AG TAGCCGTCACCTCTCGTGTCAATGTGGTTGGGTAGTCCTCACGCGCAGGGGAACAGTCCAGCCCCTGGATTGAACCGTCCGATGGCATCTA 63999 30 76.7 19 ...A..T....T.G.......A..C....T AGGGAGACGAGTGCTGCGC Deletion [63951] 63950 29 83.3 0 ...........T.G..........-...GC | ========== ====== ====== ====== ============================== =========================================================================================== ================== 26 30 95.5 33 GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Left flank : GGTTCGGCAACCTCACGGGACTCAGCGTCGTGCACCTGGAACAGCTGACCAGCGCCCTGTACGTGGAGGACCACACCCAGGTCAGCACCTACGCGGACGCTCATGAGTCACTCACGGCCGCAGCACTCTCCGTTGAGAAGTCACTCGACCTGATCAAACAAGCAAGGGACCAGAAATGATCATCCCCGACTCTTCAAGCCTCCCCGTCGCCTGGTGGAAGTCCTCCGCGTCCCACGCCCAGTCCGACTGTCTGGAGTGCGGCATCGTCGACGCCGACCACATCGCCATCCGGGACAGCAAGACGCCGAACGGGCCGGCTCTGGTCGTCGGCCGGGGTGCGCTCGCGGCGATGGTCGGGGCGGTCGCGGCCGGGCTTCTGTAGCTCTGTGCCGACGGGCGGAACAGTGAGAACAACCTGCAAGGCAGGGGTGCTTATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCCCCTCAGCCGCATAAACCCGCAGGTCACGAACA # Right flank : CGACGGGCGCAGGTACTTTTCGCGACGACACACCTAACAACTAGGGAGAAGAATGCTGAGAAAGACAACTAGTAGCCTAAGGCAACAGATTTGGCGGAACAGGGGACCGTAACCTGCCCAGGCAGTCCGTCGTTAAGTCATCAGCAGCCGATGATCATCGGATGTCGAGGCAAAGCATCATCAGCCCAGAGGAGCCCGAGATGGCCACCGAGAATCCCAACGACCAGCCCAATGGGGGCCTTCCAGCCACCATCCTCACCCTTGCCTCAATCGGCCTGGTCACGCCGTCAGCGCCCAGCCCCTTCACTCAAACCATCACAGTGATCGTCTTGATCGTGGTGCTCGCCCTCGGGGCGACAGACGGCTGGGGCCGACGCACTCGCCCTTGTCAGCATTAACGACGATACGGGCCTCGACTACGCCCCCGCCAAACCATGACAGCCGTCCGCCGCCCATCACGGGGGGGGGCGACTGTCGTCGCCACGACACGAGACACGGCA # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.21, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 37163-36095 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTHF01000035.1 Streptomyces sp. ZL-24 scaffold35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 37162 29 100.0 32 ............................. TCATCGAAGGTGCGCTCGGTGATGTAGTAGAG 37101 29 100.0 33 ............................. GTGGACGGCGCTCCGGCCGCCCCGGGACGTCCG 37039 29 100.0 32 ............................. GCGGTGAGCATGGAGCGCACGGCCTGGATGTC 36978 29 100.0 32 ............................. GTCTCGATGGACTCTTCGGGGTGGACGGAGTC 36917 29 100.0 32 ............................. TGGGTGATGGCGGGTTCGCGGGGGTGGGAGCC 36856 29 100.0 32 ............................. CACAGCCTGCTCCAGCCGGATCGGGTGGACGT 36795 29 100.0 32 ............................. CAGCTCTGAGCTGCGATTTCGCCTTGACCCAC 36734 29 100.0 32 ............................. GACCAGGTCACCGCCTACCGTGCCGCTCTCAA 36673 29 100.0 32 ............................. ATCCGCACGGGCATGGTCAGCATCACCCCCAC 36612 29 100.0 32 ............................. CGGCTCTCCGCACCCACCGATCCGATCGGACT 36551 29 100.0 32 ............................. CCGGCCCCCGCCGAAGCCAAGGCGGCCGTCTC 36490 29 96.6 32 ........G.................... GCCACGGCGATGCCGGTCGGGCGCACGAGCTT 36429 29 100.0 32 ............................. GTGTACCCGCGGGTGGTGTGGGATGTGGAGCT 36368 29 100.0 32 ............................. GGGTGACGAACGGCGCACCGCACGGGGTGATG 36307 29 100.0 32 ............................. GTCTGCGGGGACGACGACCCGGTGATGGCGGT 36246 29 100.0 32 ............................. GACCGCGCTCCTGTCGCTCTCCCTGTCCGGCT 36185 29 100.0 32 ............................. GTCTCGATGGACTCCTCGGGGTGGACGGAGTC 36124 29 89.7 0 .....................AC.....G | A [36098] ========== ====== ====== ====== ============================= ================================= ================== 18 29 99.2 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CCTGCCACCATCCACTCCCCCACCGGCTTCCTCCGCCACCGCCTGACGACCAAGATCCCGCCCCAACTCCCCGCAGAGAAAACCGGATCGGGCACCACCGCCCCCACCGCCCGCAGCCTCCTCGTCGAATGCACGGAGTGCGGCACCCCGGGACCCCCCGAAGCCCTCCCCGACGGTCTCTGCCGCCCCTGCCGCGAAACCCACAGCAAGAGGGCCGGGGACCCTTCGCCCGCGCCCGCCGCAGCACCGGACATCAAGGCCCGCATGGCGAACCTCCGGAGCCTCCTCAGAAGCGTCTGAGGCAGGCGACGGCGGGTCAGCAGATTGGGCAGCCTCTTATCCGGGAAACGAGCCGCCAGCCTCGGCCAACAGGGGCAGAATCACCCCAAGCAGGCCCCAAGTCCGGAACCGGCCGTCTGCACGGCGAGGGAGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACGAGCCTCACGCCGCATAAAACCGCAGGTCACGAACT # Right flank : CCTCCGTGTCGGCCCCCCACCGGGCAGTCGGCGCACAGGAACCCTGCTTGTCCGGGCAGTCCGCGAGGTCCGCTGAGTCCGGGCTACGGCGCCTCGCCGGGAATCGACAGATAGGCCTCGCGGAGGCGGCCCAGCAGCGGGTGTTCGGCGGCGAACCCGGTCCCGTCGATCGCCGCCAGGGGGCGTACGCCGATGCCCGCGTTCGTCGCGAAGGCGGCCGCCATCACGCGGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTCGGCGGGCGGTGTCGGGTGCTCGCGCAGCAGGGCCGTCGTCACGCCGGGCAGTACGCCGGATCGCGGCCACAGCACGGTGCCGTCCCGGTCGATGAAGCCCACGTTCCAGGTGGCGCCCTCGGTCACGTACCCGTCGCGGCCGACGAACAGGGCGTCGTCGTACCCGGCGAGCTGCGCCGCGCGCCGGGCGTGCAGGGCGCCGAACAGCCCGGTGTGCTTGACCTGGGGGAGGTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 25896-25681 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTHF01000054.1 Streptomyces sp. ZL-24 scaffold54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 25895 29 75.9 31 C.CAC......T..............C.C TAGCTACTCACCAGGGGAAATCCCGGGACCG 25835 29 100.0 36 ............................. GAGGCCGGGGCCGGCGAGCACGCACCAGGACAAGGG 25770 29 100.0 34 ............................. GTGTCGGTGTAGGCGTTGGCCGGGCCCGTGAAGG 25707 27 75.9 0 --........G..A........A...CG. | ========== ====== ====== ====== ============================= ==================================== ================== 4 29 87.9 34 GTGCTCTCCGCGCGAGCGGAGGTGAGACG # Left flank : CTCCAGCTCCACCACGGAGAAGGAGAGTCGGTCCTCCTTCTCCTCGGCGTCCACCGACAAGGGCGAGTCCTTGGCGTCCGGTGACAGCGGCCGCCAAGGCACGCCCGAGGCCCGGGCGGCGTTGACCACGTCGTTGTAGAGCTCGGTCCGCAGGACCGGTACGTCGTCCTCGTGCCGGGCCCGGAGCCCGATCTTTCCGCCTGTGAGCATGCGAGTTTCCTATCCGACGGGGCCGGACGGCGGCAATCGGTTTAGTCGGCGAACACGCCCCCACCTGGGGGCGAAGCAATCACCGCCGCCATTCCCGGCTCCTGAGGGCCATCACGCACCGGCGGTCGACTGCGGCAGGAGGCCGGCCCCGACGCCGAGCGTGGAGTCGGGGCCGACCAAGGACGGGGGACCCCGCCGATGGAGCCGCCGCCCGCCGAGGGGAACGTGGCTCACCTCCACTCGCGCGGAGAGCACAGCAGCTCGCGGGCCTGGTCCCGGGTCACCGTCGG # Right flank : CGGCCACCAGTGGCGGGCGGGAGTGTCCCGGTCCACGGTGACCATGGTGCACAGCATCGGCTCCGCCGGGTCATGCCCCACTGAGGTTGCCGCCTGGTCAGGATGCCCCTTCGGAGCACCGTGCTGGCACCGAACATCGACGGCGGGGCAGAGGCCCGTCCCCGGGGCGATTGCAGGCGGCGGTGGCCTGCTGTCTAACAGGTGATTGAGAGGTGCTCGTGCGTGGCGGGGGACTGCGAAACCGAATGCTAGTCGGTGGTACCAGAGACTAGCTATGGTGGTGTGTATGGCAAAGCAGACGAATATCCGATTGGACGACGCTGTCAAGGCGGCGGCTGAGGACCGGGCCAAACGCCGCGGGCTGACCTTGCAGGGGTACGTGGCTGACTTGATCGAGGCCGATGTGAATCAGGCACGTGCCGCTTTCATGGCCGGTGCTGCGACGTTCTTGGCTCAGTACTCGGACCAGTTCGAGGCGGAAGTCGGTGAAGACCGGTACC # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.40, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //