Array 1 1532370-1533640 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053839.1 Aliarcobacter lanthieri strain LMG 28516 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1532370 30 100.0 35 .............................. ATCAAAAAAAAATGGTACGAAAGCCCTGAAAATAT 1532435 30 100.0 35 .............................. AGTATTATTAGTGTGATTGATTTTACAAGTATTAT 1532500 30 100.0 35 .............................. TTTGATAGTTTCACCTTTTTTAGTTTCTTCATCAG 1532565 30 100.0 34 .............................. CCATTTGCATTTGACAGTTCAGGTACTTGTACAA 1532629 30 100.0 35 .............................. ATCATTAATAAAGTCTATCGGCTTATCTCTATAAT 1532694 30 100.0 34 .............................. AAAGCAATTAAAAACTGCTCTCTATCTCCTTTTG 1532758 30 100.0 35 .............................. ACTGATCAAATACACCCCCACCATCTGTTGAGTCG 1532823 30 100.0 35 .............................. TCAATTTAGTTAATCCTAAGGTGTCGATAAAAGGT 1532888 30 100.0 35 .............................. AATTCTTCCACATTTTGAAATTGACGCTTGTGTTC 1532953 30 100.0 39 .............................. TTTAAAAAATTTAATAAATGAAATTGACAAATATCCCAA 1533022 30 100.0 36 .............................. TTAAATAGTGCAATAGATGAAGCCTTAGCAGAACTT 1533088 30 100.0 37 .............................. TTAATCATATTGCTATGTCGAATCCATCAGGCACACA 1533155 30 100.0 37 .............................. CTAAATAAACAAATACAAGCAGAGTTAGATGAATTTA 1533222 30 100.0 34 .............................. AAACACCCAACACAAAATCAAAACATACAACAAA 1533286 30 100.0 38 .............................. CCATTTTCTACCTCTACCTCTTGCACTTTTGTTGTAGA 1533354 30 100.0 34 .............................. AATCAGGAGTTTAAATTTCAGGTAGATGAAGAAT 1533418 30 100.0 34 .............................. AGTGTAGTTTTCTACTTTTGTTCCTGTTCTAATA 1533482 30 100.0 35 .............................. TGGATAGAAACGATATTAAATCTATGAAAGGTGAA 1533547 30 96.7 34 .....................G........ AGGTTCTAGCTATCTTAATTTGTTTATTGCTAAA 1533611 29 90.0 0 .......................C.-..T. | A [1533633] ========== ====== ====== ====== ============================== ======================================= ================== 20 30 99.3 35 ATTGAACTAAAACATATAATGTATTGAAAT # Left flank : TTCCTTTTAGACTAAAGGATAAGATGTGAGTAAAGATAAGTTTAACTATAACTATGCTTTTTTATTTTATGATATTGCTGATGAGTTTAGTGAAATTGGGAAATATAGAGTTGCAAAAGTTTTTAAAATATGTAAAAAATATCTAAAACATCATCAAAAATCTATATTTAGAGGAAATATAACTCCTTCAAATCAGATAAAATTAGAAAATGAACTAAAAAAAGTAATAGACAAAAATCTTGATTTTATCTCTATTATAAAAGTTCAAAACAGTGGAAGTTTTAATGAAACAATCATTGGAACTAATCAGAAAAAAGAGGAATCTATATTTATTTAATTTTCCAATCTATATGAGTTTAATTTAATAATTAAGTTGCTAAAATAGGAATCTAACAAAAGTTATTTTACAATTTATTGTTAATTAAATTTTTGATTGGAAAATATGGTTATATAACCTATTTTCAGGGAAAGTCTATATTTAAAGTATTGATTTTACCTTG # Right flank : TACCAACAGAATAATTAATTACATTATCTTAATAACTTAAATTATAAATGACATTCTTTATTTATTTTATCACTATTTTTTAAAATTCTCATAGAGTTAAATATAGCTAAGAGTGCTACACCAACATCGGCAAAAATGGCTTCTTTCATACCTATGATTGCATCTGCTCCTAAAACTAAGAAAATAACTTTTATAGCCATTACAAAAATAATATTTTGATATACAATAGTTTTTGTTTTTTTAGCTATTTTAATAACATCACTAATTGCATTTAAATTATCATTTAAAACTATCACATCAGCTGATTTTATAGCTAAATCACTTCCAACTTTTCCCATAGCAAAACCAATATCTGAATTTGCCAAAGTGGGAGCATCATTTATACCATCACCAACAAAAGCTGTAGTTTTTCCATTCTCTTTTTTTATTTCTTCATATATTTTTAGTTTATCTTGTGGTAAAAGTTCATATTTTACCTCATCTATTCCTATATTTTTTGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACTAAAACATATAATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //