Array 1 13766-14100 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894418.1 Actinokineospora enzanensis DSM 44649 C503DRAFT_scaffold00016.16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 13766 30 96.7 31 .............................G CGTTCACCCTCGCCGTGCTGTCCGGGGCCCA 13827 30 93.3 31 ............................TG TGCGTCGGCGCCTGGTGAGTCGGGATGGTGT 13888 30 100.0 31 .............................. GCCGCGCGTGGACGTCGCCGATGTGGCGAAC 13949 30 93.3 31 .........................C...C TGTGGCGATGCGTGCCTGAAGCTCTCTCCCC 14010 30 86.7 31 ...........AGG..............C. GGTGCAGATTGAAGGTGACGTAGTCGACGGC 14071 30 76.7 0 A..T.......A..A.......G.....TC | ========== ====== ====== ====== ============================== =============================== ================== 6 30 91.1 31 GTGCTCCCCGCGCACGCGGGGATGGTCCGT # Left flank : GCATGAACTGCTGAGCGAGCCGGAGGAAGCCAAGTTCCACCACGTGCAGCGCCGGACGGTGGAGTCGATGCTGGCCACCATCGGCACCCAGTCGAGCATGATCGTGATCGACGCGGCCGAGCGCACCCGCCTGTTCGACCGCATCCGCACGTATCTGTGGTCCCGCCCGGAGACTTCCCAGGGCGAGTTCGACCGCCCCCTGATCACGGTGGCAATCCGCGCCTACAAGGCAGGCTGACCCGCCCGGAACTACACCCGGCTGGGCGACAGAAGTTATCCACAGGCAAGATCCACAACCCGCTTTCCAAGATCCACTGACGCCCCCGCCCGGTAGAATGGCCGAGGGGGATCCCCCTGGGAGCGGTGGGCTTTGTTGGGGGGCCGGGTGGGGGCGAACAGGGATGATCGGCTTCGCCGAACCGGCTGGCCGACTCATGCGACAGCTGAGTGAAGTGAACGAAAACTGGTCATACCCGGTATAACGTCGCAGGTCAGCAAGG # Right flank : CCCGTCAGCGCCGACGGGATCCGCTCGTCTGAGCACTCCCCGCGCGGGGATAGAAGTGCTGCCAGCCGCGAAGCGCGGGCTTCCACATTCACGAGATGTTCCTTGCTTTGACCGCAGCGCGGTTACACCAGCGGCCCGCAGATGCTCCAATGGCCGCGAATACCCGCCGCGCAAAAGCAGTCCAGTGGGCGACTGCGGCCGGGCATCGGTTGCCGTCAGCGGCTATTGCGCTCGAACACCAGTCGCAGTCCCAGCAGGGTCAGATCCGGCCGATGATGCTCGATCGACTCCGCCTCCTCCACCACGATCGGCGCCAGTCCCCCGGTAGCGATCACCGCCACGGGCCCGCCATGCCCGGTCCGCGCCAGTTCCCGCGAGATCCGCGCGACGAGCCCATCCACCTGCCCCGCGAACCCGAACATGATCCCCGACTGCAAGCACTCGACCGTGTTCTTCCCGATCACCGACCGCGGCCGCACCATCTCCACCTTGCGCAACGC # Questionable array : NO Score: 3.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 84027-84211 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894420.1 Actinokineospora enzanensis DSM 44649 C503DRAFT_scaffold00018.18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 84027 37 100.0 36 ..................................... TGACGCGGTTCGGAAGGCCAGGTCGAGGGCTCATCG 84100 37 100.0 38 ..................................... CACCAGCTCGCGCACGAGTTGGAGGGCCGGTTCACCCC 84175 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 3 37 100.0 38 CTGGCACCGGCCGTCACCGGCCGGTGAGGATCGCAAC # Left flank : GCTCCAGGTCGAGCGGTCCGGGTGTCTTCGGGACGGTGGCATCTCGGGCCGTGAGTGTGGCGACCTTGCTGCTCCATGCGCGCGGACGAAGACGTGGACGCTTGTTGTCGGGCGGCCGGTTCCCGCTTCTCGATCGGAACGTCGGCATGGCTTCCCATTCGAATGCCCCGCCGGAAAGAGCACCTCGAACGATCCACCCGCCGCACACGCACCGATCCGGTCCGCGCGACTCGTCCTGCGTACCGAACAGAACCCCGACGGTCACCGAGCAGTCCTCACCCCCGTTCCCGGCCACGGGCGACGTGCCACGGCGACACGACTGGTATCGCGAGCTCCGTCCACGCGAGAGTGTTGTCGGGTGCCCGTACGCGCTTCGGAACCTCCAGTGCGGGCCGACACGCCGGGAGGTTCCGAACCACACCTCGGCGTGTCGACCCCGGACCATGTCAACAGCTGTTGATAAAGTCCGGCCGCGTGGACAAAACCCCTGCTCACGCAGG # Right flank : CCGCCCGCCTGATCGAGCTGCCGCGTGACTCCCGGCACACAGCCACCGCATAGCCGTGGCACATGCCCGCCTCAGCGCCCCTGCCGATCGTTACCGGCATGACGGCGATCGCAGAAGCCCCACGGGCCACCGAACGAAGCACCGACCACCACCGGGTCACCCTCGATGTGGTCATTCCCGTGTACAACGAGGAAACCGACCTGGAGCCCGGTGTCCGCACGCTCCGCGCCTACCTGGCGGTGTCCGTCCCCTACCGGTTCCGGATCACCATCGCGGACAACGCCAGCACCGACGCCACCCCCGAGGTCGGTACCCGGCTGGCTCGGGAGCTGCCCGAGGTCGAGTACGTCCGCTTGGCGGAGAAGGGGCGCGGGCGCGCGCTCAAGGCGGTCTGGCTCGCCTCGGACGCCGAGGTTCTCGCCTACATGGACGTCGACCTGTCCACCGATCTGGCGGCACTCGACGTGCTGGTCGCGCCGCTGTTGTCCGGGCACTCGGAT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGCACCGGCCGTCACCGGCCGGTGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.00,-17.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 36847-36573 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894436.1 Actinokineospora enzanensis DSM 44649 C503DRAFT_scaffold00034.34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 36846 29 100.0 32 ............................. TTCGGCATGGACAGGATGTTGCTAGACCAGAA 36785 29 100.0 32 ............................. CAGTCGCGCACGTCGAGGACGATGTCCGCCTC 36724 29 100.0 32 ............................. GCCAGCGCGGTGTTGTCCAGGATGGTCCCCGT 36663 29 100.0 32 ............................. TGCACGCCATGACCCTGTACCGACCCGACCCC 36602 28 89.7 0 ..............G......-.....G. | G,T [36577,36579] ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 CTCGTCCCCGCGCACGCGGGGATGCTCCC # Left flank : GCGTTGCAGGGGCTCGCGCACGGGGACCTGTCGGCCTACAACGTGCTGGTGCACGAGGGACAGCTGATGGTGATCGACCTGCCACAGGTCGTAGACCTGGTAGCCAACCCGACGGGCCGCGAGTACCTGGCCCGGGACATCGCCAACATCGGTCGCTGGTTCATTTCGCGCGGACTTCCGCCGGAAATCGCCGACACCGAGTCCCTGATGACCCACCTGCTGGTCACCGCCGGTCTGGACTGATCCCGGACCGCCGAACTTCACCCGTCCGAGCGACAGAAGTTATCCACAGGCCGCCCCTGCCCGCCCCTGTTCCAAGATCCACTGGCGCCCCCACCCGGTAGAATGGGCCCGGGGACGCCCCCCGGGATTGGGTGGGGGCCGGCCTGGGCGCGGCTGTGGATCGCAGGCGTGGGTGTGGCTGGTCGTGATCTTGCCGGTGAGCGTCACAAGTGAATGAGAAACACTGTTGCGGTTCGGAACGCCGCAGGTCAGCAAGC # Right flank : TTTCGACGGAGGAGTGAGGTCGGTCGAACGAGCGGACACCCCACCTCTCCGGTGTCCGTGAGCTGCCAAAACGTGATCCTGGTCCCGCGATGTCGGGTTCCTCCACACCATCGGGTAGAGTTGTGGGGCATCGTTAGCGTTTTGCCTCGGCGTCGATCCAGGCTCCGGATGGCCAGCGGTGTCACCCAACCACCCGTCGGCGTGAAACGCGCCGGGCTCGTCCGTGTGAAAGCCTGCCGGCCTCCCCAGGAGGGCGGAGCCTCCCGAGACGTGCCATCGTCCGGAGAGGACCCCGTGCAGAACTCTGTCCTGCCCACGAACGACCCCGTCGACGTCGAGGAGCGCAAGCCTCGGCACCGGCAGAGCGGCAAGGGCCGCTACGAGGACACCACCGTCAGCTTCGCCGATCTCGGTCTGCCCAAGCCGCTGCTGCGCGCGCTGGCCGACGCCGGGATCGACTCCCCCTTCCCCATCCAGTCCGCGACCCTGCCGGACGCGCT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTCCCCGCGCACGCGGGGATGCTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 50281-49764 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894441.1 Actinokineospora enzanensis DSM 44649 C503DRAFT_scaffold00039.39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50280 29 100.0 32 ............................. AACACCCGGTCGCCGGGGAGCACGTACCACCA 50219 29 96.6 32 ............................G TGCAGCCACGTCGACAACATCCAGATCTACGG 50158 29 100.0 32 ............................. AGGCGCACCGGACTCCCGGTAGGCGGGTCTGA 50097 29 100.0 32 ............................. TGCTACGCGAACTGGCCGAGCACCATCGCCAT 50036 29 96.6 32 ............................G CCCTGGAGGCGGAGGAACCGGCCACCGATGCG C [50024] 49974 29 100.0 32 ............................. GAAGGATTGATCGTCTCAATTCTCGATGCGAT 49913 29 82.8 32 ...........CTAC.T............ AGCAGGTCTCCGGGTTGCAGGTCGGTGATCGA 49852 29 86.2 32 .............AC...........T.G TCGATGTGACGGCGGCTGGTCGGTGACTCCTT 49791 28 82.8 0 ............TAC......A...-... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 93.9 32 GTCGTCCCCGCGCCTGCGGGGGTGTTCCC # Left flank : GGGTACTCGACCATCTACGGGGACGCGGTCGGCGGGTTCGCGCCGATCAAGGACGTGCCGAAGACGTTGGTGTGGGAGCTGGCGCGGTGGCGCAACGCGGCGGCGGAGAAGCACGGCGAGGTGCCGCCGATCCCGGAGGACTCGATCAGCAAGCCGCCATCGGCGGAGCTACGGCCGGGACAGATGGACAGCGACTCGTTGCCGGACTACGAGCTGCTGGACGCGGTGCTGGATGACTACGTGGAGGGGGATCGGGGGTACGCGGACCTGATCGCGGCCGGGTTCGAGCCGGAACTGGTGGACCGGGTGCTGCGGATGGTGGACCGGGCCGAGTACAAGCGGCGCCAGTACCCGCCGGGCACCAAGATCAGCTTCCGGGCGTTCGGGCGGGACCGCCGCCTGCCGATCACCAGCGCTTGGCGGGAGGGGGCGGTCTGAGCTGGGCGACGAAAGTGAATGAGAAACGTCGTTACGGCTCATAGCGCCGCAGGTCAGGAAGT # Right flank : GTCGAGCCCGCCATATCCGGTGCACAGGGTTCCGTCATCCCGCGTAGGTCGGGTTCGGTTCGAACTGTGCTGCGCGGTGATGTGTCGGGAAGCGAGTCGCTGTCGTCACCCGTTTGGGGTGGTCAGGGGCTAGGGTGCTCGGTGTGGAGTCCACGGGGACCGGGGGTGCTGGGGTCGATTTCGCGCGGGTTCGGGCGGAGTTCGGGTTGCCCGATCAGTTCCCGCCCGGCGCGCTGGCCGAAGCGGAACAGGCCGTGTTCGATGGGCCGCGCGGGGAGCGGGTGGATGCGACGGCGTTGCCGCTGGTCACCATAGATCCGCCAGGGGCCAAGGATCTCGATCAGGCCGTGCTGCTGGAGCGGCGCGGGGATGGCTACCGGGTGCACTACGCGATCGCCGATCTTGGGGCGTTCGTGGTGCCGGGTGGGGCGTTGGACGCGGAAGTCCGGGGGCGGGGGCAGACGATCTATCTGCCGGACGGGAATGTTCCGTTGCACCCG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 119113-118774 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894409.1 Actinokineospora enzanensis DSM 44649 C503DRAFT_scaffold00007.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 119112 30 100.0 31 .............................. CGTCCCCGGAGCAGTACGCGCAGGTGCTGCG 119051 30 100.0 31 .............................. ACGGCGGAGTGGAAGTCCGCTGGATCTGGCA 118990 30 93.3 31 ...........A.................T TGACGCTGGTGGCAGGGACGGTGCCGCCGTC 118929 30 100.0 31 .............................. CGCCGGTGAACTCGGCGTAGACAGGCTTGAG 118868 30 83.3 32 ..............G.T....C..A....T CGCCCTCCCCGCCCATATCGACGATCCGTCGG T [118862] 118805 30 76.7 0 T............TT......T..G..G.T | GG [118779] ========== ====== ====== ====== ============================== ================================ ================== 6 30 92.2 31 CTCCTCCCCGCGCACGCGGGGATGCTCCCG # Left flank : CCGGTGCGGTTTGTTCGGGTTGTGGCGAAACGGAAGGAACTCCTCGCGGCCATGCGGGCTGCCTGGGAGGCTGACCTGCGCGGGGACGGGTGGTCGGAGGATCGGATCCAGCGGCGGGTCGCGCGCGGGGATCTGTTGCACGAGGCGCCGGAGATCGTGCTTCCGTTCCTGATCAGGACGGGTTCGCACGACTATCCGGACGCGCGGCGGGCCGAGGCTGAGCGAACGATGTTCACGGTCGCGGGCGGGGCGGCTGTGCAGGGTTTGTTGGTGGCCTTGGCGGCGGAGCGGCTGGGCTCGTGCTGGGTTTCCTCGACGATCTTCTGCGCGGATGTGGTGCGCGAGGTGCTGGACCTGCCCGCCGACTGGGAGCCGCTTGGCGCTGTCGCCATCGGCCACCCCCTGGAAGAGTTGACCCCGCGCGATCCACGTGCGGACGAACTCCTGGAGAAGTGAACGAGAAACACCGTTACGGCTTCCAACACCCCAGGTCACGAAGC # Right flank : GGGATGGGTGAATTCCGGGGGTGGTGGGGTGTGGGCGAGAATGATCGCGAAAGGTGTCGAGGGCGAGGGAGTGCCGGTGGGTCCGCATGCTGACGCGGTGGCGACTATGGCGGCGTGGCGGCCGGATGACCGGGGACAGGAGTCCTTGCGCCAGGCTTACCTGGGCTTTCTCGCCGCCCGCCCCGACGCCTGTGAACGGTCCTGCGAGGCAGGCCATATCACCGCTTCCGCGCTCGTCTTCGACGCCGCCGGGGAACACATCCTGCTGACCCTGCACCCCCGCGTCGGAAAGTGGCTACAGCTCGGCGGCCACTGCGAGCCGTACGACAAAACGCTCGCCGGTGCCGCTTTGCGGGAAGCCCGGGAGGAATCCGGCATTCCCAATCTGCGCATTGATCCGGTGCCCGTCCACGTCGACGTGCACCCGATCACCTGCTCGCTCGGCCTGCCCACCCGGCACTTCGACGTCCGGTTCGCGGTGCGGGCGCCGGATGGCGCCA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCGCACGCGGGGATGCTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //