Array 1 166718-168140 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBEV01000002.1 Campylobacter armoricus strain CA1665 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 166718 36 100.0 31 .................................... ATCGGAATTAGAAAAACGAATACCAAGACTT 166785 36 100.0 30 .................................... ATCTTACTAGCAGAAAGCTTAGAACCATCA 166851 36 100.0 30 .................................... CATCATGAATGGAGAATACTTATCAGTAAG 166917 36 100.0 30 .................................... CTAATTCTTGTCTTTTAGGTGGGCGGATAA 166983 36 100.0 30 .................................... AAAAGCATAGTAGGTTTTAACCCCTGTTTT 167049 36 100.0 30 .................................... AAAATAAAGCTCACGGAAAAAATGGTAGCG 167115 36 100.0 30 .................................... AACGAAGAACTTGATATGTTTGCTGCTAGT 167181 36 100.0 30 .................................... TTGACAACGAATGATTAGAACGTTTCTTCA 167247 36 100.0 30 .................................... TCTGCTGAGGGTGGTGTAGTTGGTTCTTTA 167313 36 100.0 31 .................................... TCATCATAAATGGAGAATACTTATCGGTTAA 167380 36 100.0 30 .................................... TTTCCCATATCACAAGAACCGAGTTTATAA 167446 36 100.0 30 .................................... TTTTTGGTTATCAAGACCAATACCAAGAAT 167512 36 100.0 29 .................................... TCAGAAAACATAAGTTTTTCAACTTTATC 167577 36 100.0 30 .................................... CAACATAGGTTGAAGACGCAATAAAGCAGT 167643 36 100.0 30 .................................... ACTTTTTCTGTTTATTTTTATCTTGTGAAA 167709 36 100.0 30 .................................... TTCTATTATAACCACATTTTTGAAAAAAAG 167775 36 100.0 30 .................................... CAACATAATCAACAGAATGAAGAGAACAAT 167841 36 100.0 30 .................................... TCTATGCTTGCTGGAACTATGCTTTTAATG 167907 36 100.0 30 .................................... ATATTTTACCTTATAATTACATTATAATTA 167973 36 100.0 30 .................................... ATAAAAGGGAAATACGGACTTATAGATAAA 168039 36 100.0 30 .................................... CTAAAGTTTTATATCACATTCATTTAAAAT 168105 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Left flank : TTCGTTAAATGGACATACTTTTCTATTTTTAACACAATTGTTTGCAAGTGGTATTGAAGAGTTACAACTATCACCTATTCCATCACCATCTGTATCTATTAAATCATCAGTTGAAGCTGGGTGGCAATTTCCACCTTCATCTTTTGGAGTATAACCACTAGGGCAAGTATATTTATATGTAGAATAAGGTATAATCACTTCTTCTTGAGTACAAGTTGTTTTACCAAAATCAGCACATTCAATATTTTTTCCATAAGCTTCATATGTTACATTCCAACTGCCAGTTCCAACTGTAGCAAAAAATGCCACCCCTTTGTTTAATCCATTTTTCAAATATTGTTTTAATTCTATATTGAGAGATTTTCCACTATATTTACTAAGTTCTCCATAATAATCAGGACGATAAGGTATATACACCAATGCCTTACCATCATCTTTAACACCATTAACATAAGGATAATTATCAACAACACCTACAATCGAATTGGGTGCAAACACAG # Right flank : TAGACTTTTATCAAACAAAGAAAACTAGGTGTTTTTCTATAGAAAAAAACCTAGAATATGCTATAATTCTTGCTAAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTCATCCACGCAGGGTTACAATCCCTTTAAAACCATTAAAATTCAAATAAACTAGGTTGTGTAAACTTAGTTTTTTTCTTTTCTTTGTTTATTTTTTCATTGCCATATTTAAAATCTTTACTTTTTTCATCATATTCAAATAAAACTAGATTTTTATCATCATTTATTTTTTCATTAAAAGAAGCTCCGCCTAAAAGAATTTGCATATTATCAAACTGTTTTTCTGTTATGGTTAAAACTCTTATATTTCCATAAGGTGGTAAAATTTTCTCTATCGATTTTATCGTTGTTTTTGCCGAAGCTGATCCTTTGCAAATTTTCACATACACGCTAAATTGCATCATAAAAAATCCAAGCTTTATCAATGAGTTTCTAAATTTATTTGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //