Array 1 13361-11625 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVDM01000048.1 Streptomyces sp. HG99 scaffold48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 13360 28 100.0 33 ............................ GTTCTCCGTTGCGGTCAACCGCCGCACCTACGA 13299 28 100.0 33 ............................ GCCCTCCGGATGGCGGGGCAAGGGGAGTGCACA 13238 28 100.0 33 ............................ GCCTGGGAGCAGGTGGAGAGCGGGGAGTTCCCG 13177 28 100.0 33 ............................ GGAGAACTGCCCGGCCTCGGAGGGGCGGCCCTT 13116 28 100.0 33 ............................ GCCCCGTCAGCCCCCTTGGGGGCGCAGACGGAA 13055 28 100.0 33 ............................ GGGCGGAAAGCAGCAGGCGCAGGTGGTGGCCGC 12994 28 100.0 33 ............................ GGCTTCGGAGTCGTGGGGTGTCGGCTCGAACTC 12933 28 100.0 33 ............................ GTCCATCAAGATCACCAACGGCTCCACACAGAA 12872 28 100.0 33 ............................ GCCCCGCGCCGTCGCCGAGTGCCCGTCCGTAGC 12811 28 100.0 33 ............................ GGTCGAGCTTGTGGCCATTCAGAATGAGGCGCC 12750 28 100.0 33 ............................ GCCAGCCGCCCCGCCGTCTCCGCCCGGCCACCG 12689 28 100.0 33 ............................ GGAACATGACCTCGGCGACGATGCCCGCGGTCA 12628 28 100.0 33 ............................ GGCTGGGATGAGCTGGACGTTGCCGGGTGGGAC 12567 28 100.0 33 ............................ TCGTTGACGCGGACGGCGCCGGTGAGCCTGCTC 12506 28 100.0 33 ............................ GTGGCCGAGGACGTCCATGTAGGTGGGAGCTGC 12445 28 100.0 33 ............................ GAACAACCAGATGTCGTCTGCGCCGTAGGGCCA 12384 28 100.0 33 ............................ GGCCATGCTGGGCATGGGCAACCTGTCCATGCC 12323 28 100.0 33 ............................ GCGTCAGACAGCCCGGATCTTCGCTCCTCGTCG 12262 28 100.0 33 ............................ GCGAAGCGCAAGAGGCAGTACCCGGGCCTCCAC 12201 28 100.0 33 ............................ GCCAAGAGGCCCACCTATACCGAGATGCGCACC 12140 28 100.0 33 ............................ GTCGCAGACGGGCCTGAGCCAGCCGTCAGAAAG 12079 28 100.0 33 ............................ GACCCACCCGATCGAAGAGGTCGCCGTCCACCC 12018 28 100.0 33 ............................ GGCTATGGGGCCGCATTTTCGATGATGCTCACC 11957 28 100.0 33 ............................ GGATCTCCGGCACTGGTTCGAGGAGAGGTGAAC 11896 28 100.0 33 ............................ GACGCGCCCCGCCTTGGCATCCCCCACGAGCTG 11835 28 100.0 33 ............................ CGCCTGTAGGCACAGGAACTTCACAAAGCCTAC 11774 28 100.0 33 ............................ GGCCCGGTAGCGGGAGCAGCGGGCGCACTGGCC 11713 28 100.0 33 ............................ GCCGGATGCACGGCAGTTCCCGGCTCCTGATTT 11652 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 29 28 100.0 33 GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Left flank : CCAACGCCTCCTGCAGCCCGACCTCGACATCGACGAACCGGACCCCGAGGAACAGCTCGTCGACCTGTGGGACCCCGTCTCCGGCGTCCTCCCCGGCGGAACCAACTACGCAGGAGACGCCCCATGACAGACCACAGACGGCCCCACGAAAGAGCGCCATGGCCTCCATGATCACCCTCACCATGTCCGCGGTCCCCGACCACCTCGGCGGAGCACTCAGCCGCTGGCTCCTCGAAGTCACCCCACAGATGTACGTCGGTACAGTCTCGGCCAAAGTGCGTGACCAACTATGGGATGCCATCACCGCCTGTGTGGAAGAAGGCGTCGCCGTCATGGTCTATCCAGCCGCGAACGAACAGGGCTTCGAGCTACGCACGGCAGGCCAGCACCGCCGTAACCCCATCGACTTCGACGGCCTCACGCTGGTCGGCTTCAGCCTCCTCGACGACAAGTACGGTAAAGAAACGGCAAACCCGGTATAACGTTGCAGGTCGCGAAGT # Right flank : GTCCCTTCCGTGCTCTCGACACCAGACCACCAGCTCGGGGCGGGCCCCGGTGACGGCCGCCAGCAGGGCGCAGACCACGGCCGTGACGGAGGCGACGAACAGGGTGCTCGGACCGTAGGCGTCGCGTGCAGAGCAGCGGGCACGCCCCAGCCATCCGCTGCCGGTCCCGGTGCTGGTGAGGGGATGGCCTGCCGGGCACGCCGACCGCCAGGGTTCCTCGGGCGGCACCGAGAACCGGTACGCGGGACGGGGATATGAGCACGCCCGTGCCGAAGCCCCACAGAGCGGCAGCCGTGATGATCAGCAACGTCTCCACCGGACGGAGCTTAGGGTCAGGCCTGGCGCCAGGAACGCAGCCTCTCGGCGATGCCGTACGAGTCCAGCCCCAGCCCCCGGATGTCGTAGATCAGTTCCCGCCAGAGCTCAAACTTCGTGTCCACGCGTTCTCCGGAGGCCTCCAGGTAGGCAATGGCGACGCCGTATCCGTACACCTCGTTGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 23044-25878 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVDM01000048.1 Streptomyces sp. HG99 scaffold48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 23044 28 100.0 33 ............................ GAACGCCGGCTTGATCAACCAGGCCAGCGTGAA 23105 28 100.0 33 ............................ GACGATGATCCCGAGGATGAGGATCGAGACGAT 23166 28 100.0 33 ............................ GGCCCGCCCCTACCTGCTGCGCGTGACTCGCGT 23227 28 100.0 33 ............................ GTTCATCCTGCCCGAGTACACGTTGGGCTGGCA 23288 28 100.0 33 ............................ GCTGACGCTGAACAACATCGACTCGGTGTACAG 23349 28 100.0 33 ............................ GCCGCATCCGAGGCCTACGTGGCCGCGGAGTGC 23410 28 100.0 33 ............................ GCGCGAACTGGTACGCCCCGTAGGCCATGACGC 23471 28 100.0 33 ............................ GGCTGCTGATCTCTCCGCCGCCCGCCGCCATGG 23532 28 100.0 33 ............................ GGCTTCCTCTTGGCCGGGGCCATCGGGGTGTGT 23593 28 100.0 33 ............................ GCACGGGCCCCCTAAGGCGAGCGGGGGAGCATT 23654 28 100.0 33 ............................ GGTGGGCGCCTACCGGCCGTCTGCGGCCCACGG 23715 28 100.0 33 ............................ TCTTCATTGCGCGAGGTCGGCGAGAAAATCCAC 23776 28 100.0 33 ............................ GTCGAGGTTCCACGTGAACTGGTCCAGGGTCTC 23837 28 100.0 33 ............................ GCTGTGGCCGTCGAGGCGTGCGGCGGCGATGCC 23898 28 100.0 33 ............................ GCTGTAGGTCGGTAGCGGTGCGGAGGCGGCCCA 23959 28 100.0 33 ............................ GCCCTGCATGCGACTCATGAGCCCTCTCCCATC 24020 28 100.0 33 ............................ GCACGACTTCAGGCGTATCGCCCGCAAGCGGAT 24081 28 100.0 33 ............................ GATCAACCACGGGTGGCAGCGGCCCAGCGACCC 24142 28 100.0 33 ............................ GGTGCTCGACGCGCTGGCCCGTCGCATGCCGGA 24203 28 100.0 33 ............................ GCCGAGCCCGTATTCGCAGTGGCAGACGCAGCC 24264 28 100.0 33 ............................ ATCGCGCAGCCACCCGAAGTTCTCGTTCACCGC 24325 28 100.0 34 ............................ GCTGAGGCCCGGGGGGCCATCACCCCCCCCGGGC 24387 28 100.0 33 ............................ GCCGTTCGCGTTTCCGTCGGAATGGTTTCCGAG 24448 28 100.0 33 ............................ GGCGGACAGGTTCTCGATACCGGCATCCTTGGC 24509 28 100.0 33 ............................ GCCGAGCCGTCCAGCCGTGAGACCTGCGCTCAG 24570 28 100.0 33 ............................ GGTCACCGGTCCACGGGGATGGGAACGAGCATC 24631 28 100.0 33 ............................ GGTCATGAAGTTGGCGACCGGGTCCAGCCCGAA 24692 28 100.0 33 ............................ GGAGCCCGCCATGGACACCCTCACCACCACCAC 24753 28 100.0 33 ............................ GCTGAAGGGCTGACGTGGCCGGCAGCGGCACGC 24814 28 100.0 33 ............................ GTCCGCGCGGTCCCACCCTTGGGTGCCCGTCAC 24875 28 100.0 33 ............................ GCTCTACGTCCTCAACCGGTTCGGCGGATTCGT 24936 28 100.0 33 ............................ GTCCCTTGCTCTTCGGTGGCATTCCTCAGTGGT 24997 28 100.0 33 ............................ GTCGTTGGAGTCGGCGAAGAACAAGCTCAACGA 25058 28 100.0 33 ............................ GAAGAAGGCCGGGTATTGGCGGCACGCGTTGTC 25119 28 100.0 33 ............................ GTACGCGGCGAGCATGTTCACCCTCGTGGACCG 25180 28 100.0 33 ............................ GTGCCGGGACTGATGGAGCAGCAGCCGGGCGTT 25241 28 100.0 33 ............................ GCAGTACGAGTACCGGTGCCCGTCCTGCCGTCG 25302 28 100.0 33 ............................ GCTGAACGAGCATCAGGACGCCATGCTCCGGAT 25363 28 100.0 33 ............................ GGGGACTCGGGCCGTCTCCATCGGGACGACGGT 25424 28 100.0 33 ............................ GGAGGTCCCGCCCTGTGACTCAGTGGCAACCGG 25485 28 100.0 33 ............................ GCCTCCGGAGTCCAGGGCCCACGACGTGCGGGC 25546 28 100.0 33 ............................ GTACACCGCCCCGTACCGCCCGGCGGACGACGA 25607 28 100.0 33 ............................ AGTCGCGGTGGCCGAGCGGCCGTTGGTCGAGCG 25668 28 100.0 33 ............................ GCAGGGCGGCCTGACCCGCTACATCGACCAGGT 25729 28 96.4 33 .................A.......... GGTCGCTGCGCCCAACGGTGTGGCCATCTGCGA 25790 28 100.0 33 ............................ GGCGACAGCCTCGGCCCACGACTCCGGATCGGG 25851 28 92.9 0 .............GA............. | ========== ====== ====== ====== ============================ ================================== ================== 47 28 99.8 33 GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Left flank : CGCCTTGTATGCCTCTGGCACCATCGCCTGGAACGGCGGGCTGACCTTCCCGATGTCGTGCAGCCCGGCCCACAGGCACAGCCACTGCCGACACACCTCCGCCGATACACCAAGCCGCCGCGCCGTCCGTGCCCTGGCCTCGTCGGTCAACGTCACATCCCACAAAGCCCCCGCAACTGCTGCCGTATCCAACAGATGACAGATCGCCGGATAGGAGCTTGTCAGGCCCCTGTGTTTCCCCCACAGGCGCACATCAACAGTCGGCACCGTCATACGGCCCCCCATCTCCCCTGCGGCACAATCACCGCGGATACAGAGATAGCAGCCACCACCGACAACGCATCCCCAAAGCTCGGGATATGCCTGCACTGCAAGCACGCGTGACAGTGTTCAGCGGTAACGTGTGGCCACCAACGCGGCCACCCAGAGGCAACACAATGCGGCGCAACATTCGTAGTCAAGTAATCGCAAAGCCTTCCTGACGCCGCAGGTCACGAAGG # Right flank : CGCGTGGAACGTCGGCGAGCACCAACTGACGTACGTCATCTACCGCAACGGTGCCTGGGAGCCGGTGCATGCATGGGCGGAGTCGGCGACGCTCGCCAAGTCCGCAGTCGCCTACAACGCGGGCACCCTCAACCGGGCCCGTGAGGCGGGCGTGCAGTTCATGGAGGTGTTCGACGGCGCCGGGTGCGGTTGGACCAGCCACCGGGACACCGACAAGGCCACAGGCACGCTCCGCTCGGTGGAGGCTGCGGCGGCGTGGCCGATCTCGCGTCCGCGATGCCTGCGAGCCTTTGGGCCGCGCCCGGACGTGGGCGCGCTCAGCGCCGCCGTCGATGCGTGAACGTCTGGATGGGTCAGGCCAGTTCGCGGGTCATGGACGCGTAGACGGGGCTGTCGGGGAACGGCTGCTGTTGGCCGACGGTCCGGTAGCCCCACGCCTCGTAGACGGCCTGCACGGACCCGTTGCCCGCGGCCGGGTTCACCAGGAGGGTGACGCGCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //