Array 1 39339-38782 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHCYL010000009.1 Campylobacter lari strain TTU_628 NODE_9_length_69822_cov_68.243620, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                       	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	======================================	=======================================	==================
     39338	    38	 100.0	    32	......................................	TCATCGCCTCTTTCCACTACATAACCATTGTC       	
     39268	    38	 100.0	    34	......................................	TTAATCCTTTTTCCTCAAGTACTACATTTAATTG     	
     39196	    38	 100.0	    36	......................................	ATATTTTTTCTTCTTTAAAATAACGGTTAAGAGCTG   	
     39122	    38	 100.0	    35	......................................	CTATAGTTAATAATATTGTATTTGCTGTTAACATA    	
     39049	    38	 100.0	    39	......................................	TTAGAAAATTCTTTACTATATCTTCTACAAGCATAACTA	
     38972	    38	 100.0	    37	......................................	CTTCTGCAGCACGGTCTAAATTGCCATCCATGGTGAA  	
     38897	    38	  97.4	    39	.....................................A	TATTAAATGCTTTTCTTAAAGCTTGACTTTCTGCAACCT	
     38820	    38	  92.1	     0	.................................TG..A	|                                      	T [38786]
==========	======	======	======	======================================	=======================================	==================
         8	    38	  98.7	    36	ATAAATACAATATGACCTGATTAAAAGGGATTGAAACT	                                       	       

# Left flank :   TTTTTATGCCAAAAATGCATAGAAAAATCCTTTATACTACACCCTAATAAAGACAAAAATGTTTTTACTCCAGATAATGATTTGTTTTTTTTAATTTGCGAACTTTTTAAGTATTAAAAGCTTGAATTTAAAAACTATATTTTTAAAATGACTTCGCAATTTTGTGTTTTTATGCATTTTAAAAATACTTTTGCTAACTTTTATAATTTTTTAAGTTTTTACTGCTGAAAATTTAGGCATTTGCAAACTTAAAATTTCCAAAAAATTCACAAAATGTGGTTTTGCAAAATTTCCTAAAAGCATTTGCGAACTTTTTTTACATTTAGAAGTATTGAAATATAGTCATTTTAAGCAAAAATTAATCAAAAACACCCTTTTTAAAAATCGTAATTAACCTACATTTGCCAACTTTTTATTTACATAACTCAAATGATTATTACATCGGTATTTATAAAAAGATGTTATAATCTCATATCTTTTTAAACTTGCAAAATTAAACT
# Right flank :  CAAGCTGTCATTTATTTGTGGTAAATTTTTGTAAAAAAACAAGGAGGTTGCATAAAAGTTAATGTAAAATAAAGTAAAATATATAAAATTTAAAAATTTATAACAAAAGGAAAATACATGTTTTTAAATTTACTAACACCAGAAGAAAAAATTTCATTTTTAGAGATAGCACATCATTTAGCTCATAGCGATGGCAGTGTTTCAAATGCTGAGTCTGTAGTTATTAGCGGGTATTGTGCTGAAATGCAAATAGCAAATATAAGCTATGATGATTCTAAATTTGATTTAAGATCGACTTTAAAAAATATCAAATCCTCTCAAAGTCAAAAAATCATTTTGCTAGAAACTATGGCGCTTGCTATGGCTGATGAACTTACGCATTTTGAAGAGCTAGATAAAGAGGAAAAAAGTGTTATCGAAGCTATGCTAGAAGAGTTTGGTTTGTCTAAAAACTTAGCTATTGTGTATGCAGAATGGACTAAGGCTGTATTGTCTTTAAC

# Questionable array : NO	 Score: 3.20
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATAAATACAATATGACCTGATTAAAAGGGATTGAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:73.68%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-0.50,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//