Array 1 144-322 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010000736.1 Desmonostoc muscorum LEGE 12446 NODE_740_length_3986_cov_2.94325, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 144 37 100.0 35 ..................................... ATTTACGGCAACGCCGCCGGAACCCGACGTATAAC 216 37 100.0 33 ..................................... CAAAAAGCGGAGAGTAAGCATTGCACCCATTGG 286 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 100.0 39 ATTGCAATTAACTAAACTCCCTATTAGGGATTGAAAC # Left flank : ACCCCGTGTATAATAGTTATGACCTTCCGTGCCTTTAGACTTGCTTTCCGATGTGGAAGCACTTCATGGCAGTGCCCTTGTGGAAGCACTTCGTGGCAGTTACTGCCATCAAGTGGTTCAAGTAACACGTAGTTCTTCCAGCAA # Right flank : CTTGTAAATCGGCTTCAATATTTATGAAGAACTACAAAAATTATTAAGATAGTTATAAAGTTCACGAAATAAAGGGCATTTTCGTTGAACTTCAGATAGATTGAGATACGCTAATAGCTCAGGTGTATGCAATCCTTTAGAAAAGCGCGTTGAACTGCTATCAAATTCATCTAAAACACTTGAATCGATTAGTGCTTGTGATAGTTTTTGTTGACAACAATCTCTTTCAATATCGTACTCACTAAAGGATTCTGGATTATCAAAAGGAATATTGATTTGCGTACTCAGCCACCAACGCATACGCTGATGTCTACCTCTAAAGTCGGGATGTTGAGCTACTGAGTTATTCCAATCTGCGATAATCCAAGCTTCGAGTTCGGGAGCAGCAAACCCAATAAATATTGGAATATCAGAATATGCTGATATCGCTGACAATATTCTTTCTCTTTCCTGTATCGGATCGCGGCAATCTAAATCATCAAAAACTAAAATTAAATCAC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 3509-3688 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010000759.1 Desmonostoc muscorum LEGE 12446 NODE_766_length_3837_cov_4.01482, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 3509 37 100.0 34 ..................................... CGCTTAACCATTAACAAACTAGCAGCTGATGAAG 3580 37 100.0 35 ..................................... TTTGCCTCAATCCTTCTCTATCTGCTAATGCTATC 3652 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 100.0 35 GTTGAAATTTCACTTACTCCCTATTAGGGATTGAAAC # Left flank : AATGAATGTTGTTGTGTCTTATGATATTTCAGAAGATAAACGTCGCACCAAAATTCACAAAGTTCTCAAGTCCTATGGACAGTGGGTACAGTTCAGTGTATTTGAATGCCATCTCACCGATACACAGTACGCAAAATTGCGATCGCGCTTGAACAAGTTAATCAAGCCGGAAACCGATAGTATCCTCTTTTACTTTATATGTGCCTGCTGTCTAAGTAAAGTTGAACGTATTGGTGGGGAAAAAATTCGTGATGACTCTATTTTCTTTGCCGAATGCGCGGATGGGTAGGTGTTCAAAACGAAATTGGAGGAAGTAACCTTCAAATTCGCCTGGTGCAAGAGTTTTGGGGAAAATAGCTAAGAAAGTACCCGCGCACCTTACACAGACTACGTTCTAGCTATTTTCCTCAAACCCAATGTCAATTTCACATGCTATCATTACTGCATCCGCGCTACCGAACCTTGAAAACCAAATACAAACTGTGTTTCAGGCTACCGCA # Right flank : GACTTATTTTACCCAGTTCTCTTGTCACTTTACCGACATGATGGCAGTAAAGTGGAAGCAGACGATGGCAGTAAATGCACCTCAAAGGTTGATTACTTCGTGATGTAGAAAATGCGCTGGCAGAAAATCCATGAAAGAGTGGAAGCAGA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 1573-1243 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010001122.1 Desmonostoc muscorum LEGE 12446 NODE_1464_length_1725_cov_2.86921, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1572 36 100.0 35 .................................... ATCATGTACTACGTTGGATTTTGGGCAATGCTTAT 1501 36 100.0 37 .................................... CCCGTAGGCGGTCGAATTGTCAATCGCGCACCTAGCT 1428 36 100.0 38 .................................... AAACTTCATTGACAGTCAATTAATTCACATTGTCTATG 1354 36 100.0 40 .................................... TATTACTTGCTAGATTTAGTGAGTATGTAGATTTTAATTT 1278 36 91.7 0 A..............A.........G.......... | ========== ====== ====== ====== ==================================== ======================================== ================== 5 36 98.3 38 TGTTTCCATCCCCGTGAGGGGTAAAAGAATTAAAAC # Left flank : TCTGCTTCCACTCTTTCATGGATTTTCTGCCAGCGCATTTTCTACATCACGAAGTAATCAACCTTTGAGGTGCATTTACTGCCATCGTCTGCTTCCACTTTACTGCCATCATGTCGGTAAAGTGACACCCCGAAGATCCCAGCGATGTAACC # Right flank : CCTACCCTTCCAGAAGCCTTATCCAGAGAGGGTTAGAGATACCCATTTTAGCGGGGGGTCGAATTTAGCTGTCAACAAGTAGAAATTATTGACAATTGGTGAATCATCTACCCTTGTCAAACTCTTACGCAGTAAGCGATTAGCGGGGGTCAACGAAACCATAAGGGTTTTGGCGATCGCTCTACCCACGCTAAAAATTTGCGTATCAAAAGTAAAACTAAGCACTTTTACTTTGATTTTGAAACATGATATTAAGTTTTCAAGGTTCTATGGCTATGAGCGGTAGTATAACAAACTACTTCAAATTTTGAACGCCTAAAGTATTAACTTTTTTATCGCGCAGTCAAAAGGTAAAAAAGAAAGAGTTTTAGGAGATGTCTGAGAGAAAAGTTAGCACAGAGCGATCGCGCGATGTAAGTGTGTAATATCAGCTTACTGAATTTATTAAAATAAATACACGATCTACTGAAATGAGAAAGCAAACCCCAGTTTGAGAAAGC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTTCCATCCCCGTGAGGGGTAAAAGAATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 13443-13916 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010000154.1 Desmonostoc muscorum LEGE 12446 NODE_154_length_14066_cov_4.34665, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 13443 37 100.0 35 ..................................... GCTGGGTACACGCTGGCAGAAGCGGATGATCTCAG 13515 37 100.0 35 ..................................... TTGGCGGCATTGCCAATCCCAATAAACTTTCCGAA 13587 37 100.0 42 ..................................... TAAGTTTTCATGGCGCGGATAGGCGCGGCGGGGCTAGGTAAG 13666 37 100.0 34 ..................................... CGAGTTGCAGCAATATCAACCACGGGGAAAGTAA 13737 37 100.0 34 ..................................... TTTTAATATGAAAGTGTCGAACCGTTAGACAGGA 13808 37 100.0 35 ..................................... AGGTATGATGGCAGGAACCGAGGAAGGCAAAAAAG 13880 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 7 37 100.0 36 ATTGCAATTAACTAAACTCCCTATTAGGGATTGAAAC # Left flank : CAGGAGCAGTACCTTGGACAGCAACTCAGGCACTCAATAACAGTACATTACCTTATGTTGTCCAGTTGGCGAATTTGGGAATTAAGGCATTGGAAGTTAACCCAGCCTTAGCTAAAGGTGTGAATGTGCAGAATCATAAATTAGTGCATCCTGCTGTGCAAGAAGTGTTCCCTGATTTGGTAAGTTAGAGGTTATACAGGCGAGGGTTAGAAACTGCGATCGCTTAAATTAATGGTGGTAGCCCTCAGCAATTAGACTAATTTCGTTGCCAAATGCGCGGATGGATAGCTGTAGAAAATCAAGACAAGCAAAAAATGGCTGCATCTCAATGTGTACAAGGTTTTGAGGACTATAGGACTTTTAAACCATCCGCGCACCTTACGGAGACTGGGTTTCAGTGATTTGCATCTTGTGTAAATACCATTTGCTGTGTTATGATTCTTTCATCCGCGCAACTGCATCTTGAAAACCGAATACAGCAAGCCTTTCAGATGCCAGCA # Right flank : GCGAGTCTTGGCTTTTCACGTAGTGTCACTTTACCGACATGATGGCAGTAAAGTGGAAGCAGACGATGGCAGTAAATGCACCTCAAAGGTTGATTACTTCGTGATGTAGAAAATGCGCTGGCAGAAAATCCATGAAAGAGTGGAAGCAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 7509-7838 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010000201.1 Desmonostoc muscorum LEGE 12446 NODE_201_length_12258_cov_5.10997, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 7509 37 97.3 35 .......................G............. CAGATACTATTCGTGAGATTTCACTAACCTCACTT 7581 37 97.3 36 .......................G............. TATAGTGGCAACTTCTATCACCCCCGCGAATATAAA 7654 37 100.0 36 ..................................... AAATTCATGTTTGAATGCTTGACATTTGCTTGTTTT 7727 37 100.0 38 ..................................... AAATCACGTCCCAAGACACGAATCATGTCTTCCAGGTC 7802 37 86.5 0 ......................T..........CTGA | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 96.2 36 GTTTCCACAGACCATTACCCCGCAAGGGGACTGAAAC # Left flank : CGCACGGGAAAACATTTACTTAAGTTTAGCTGGTTCAATATTAGGAGGCATCCAATGGTTAAGGGTGCTTATTCCACCGATGACCCAGAGCTAAAATCTTATTGGGAAAATCGACAGAATATTAAATCTAAAAGTTTAATTCCTAGTTACCAGAAGATTGCCCAAAAACAAGGATTCAAGTGTCCTGTATGTGGGGAATCATTACTCAATGATGAACCCATACAAAAGCACCATAAAATCCCTTGTCATCAAGGTGGTAACGATAGTTACGCTAATCTGGAATTAGTGCATTATTACTGTCATCAACAAATACATTCTCTAGTACAGAAACTCAATTCTGAACTTGATGAGCAACTGAGTCTTTGGTAGCTCTAGGATTTGCTAAAGCCGGATGCTTGGTTAACTTGCATGTCCGGTTTGTCGGGGGGAAAGGGGTAGCAATATCCCTGCCCTACCCATTAAACGAGAAGCCACACCGTTTGAACTCTTAACAGACGTTT # Right flank : AGATACGGATACCGCAGCAGACCCTATAACATACTTAGAAAAAATGTCACTTCATTTGTCCCCATATCCCTGCCTTTGATGCGATCGCCAACCTCTGGGCATTCTCAAAAGCTATTTGATTTGGGCATTCCACTTCACCTTGCTGCGTTCTAGCCAAACCACTCTTGAGCAATTCTTCTTGAAAACTAATCTCAGCCTCACCTTGAGCGTAAACCATCACCTCTCCAACAGTACGCCCCTGCTCATCTTTACCCACCGGAATGACCATCACTTGGCTATCATTAGTTGCAACAAGCGATCGCAGTTTCTGTTTTGCTTTATTACCAAATGGTTGTCCTGTAGCTTTATCGTGTCTGACTTCAGGTGCATTAATTCCACAAAGCTCAACTTCCATTTGGCTGCCATCGGTTTGGCGGACTGTTATACTGTCGCCATCTGTCACTTGTGTAGCCGTCCATTCTTGGCTGAGTGCGATGGATGGCTGGTTAGTTTTTTGGAAA # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACAGACCATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : GTTTCCACAGACCATTACCCCGCGAGGGGACTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 9416-8156 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010000258.1 Desmonostoc muscorum LEGE 12446 NODE_258_length_10510_cov_4.05085, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 9415 37 100.0 34 ..................................... CAAAGCAAACGCACTAGGAACTCTAGAAGACTTC 9344 37 100.0 34 ..................................... GGAGATAGCGGACAGGCAAGTTCACACGTTTATC 9273 37 100.0 41 ..................................... CTGGAGCGATCGCGTACACTGATGCTAACTGATCGTTTGAG 9195 37 100.0 35 ..................................... ACTTTGATTAGTCAATAATGTGACCCGAATAGATT 9123 37 100.0 35 ..................................... CAAAAAAGCCCAAGCCCAAGTTAGCAAACTGTATC 9051 37 100.0 34 ..................................... AGAATGATAACTTCTAAATCGGAATCTGCGGAAT 8980 37 100.0 35 ..................................... AATTACCTGCCTCCTTAGAAACTCCAGGAAATCAC 8908 37 100.0 33 ..................................... ATAGATAATACGCCTAACAGTCAGCCCCAGGCT 8838 37 100.0 34 ..................................... CTCTTTGTTTGCAATTGTGCATATTCACCATGAA 8767 37 100.0 35 ..................................... ATGCAAATGCTTTTTGGACAACTCGATCAGAAGAT 8695 37 100.0 36 ..................................... CTTGCTGTACTTCTCTTTAGCGTCCGGGTTCTCTTC 8622 37 100.0 34 ..................................... ATTGTAAGCTTTAGCAAGTCCCGCACCAGCAGCA 8551 37 100.0 34 ..................................... TTCTTTCTCATTAATAGACTTCCATTGGTTATCA 8480 37 100.0 36 ..................................... AATTTTGCCTTCGCTTATTGACATTATCCAATAAAA 8407 37 100.0 34 ..................................... GAGATCGCTGCCTTTATTGCTAAAAACTGTATTG 8336 37 100.0 34 ..................................... GGCAAAGAAAGTGACAGGTCTGAAGCTGCCACAA 8265 37 100.0 36 ..................................... AAATAAGTCATGGCTGGGTGATGCAGAGCGGCAAAA 8192 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 100.0 35 ATTGCAATTAATCAAAATCCCTATTAGGGATTGAAAC # Left flank : CAGGACATAGCGGAACTACTGAACGCATCCTTCAAAATCTACACGAATTCTTAGAGCGATCGCTCGGACACCCTTATACTTTAAAGGTGATTGATGTTTTAACTCATCCAGAACAAGCAGAAATTAATCAGGTTTCTGCTACTCCTACTCTTGTTAAGGTTTGGCCTCACCCAATTCGCCGAATCGTTGGAGAGTTGGATCATGTAGAAAAAATTTTACAGATGTTGGCTACCAAGGAAACATTTTAAGTTTTATCAGGATTTCTTTGCTAAGTGCGCGGATGGGTAGGTGTTTATGAGCGGGTGACTACAAAAATGGCTCAATTGCCCTCTGTGTAAGAACTTGAAGCCACTAGTATCTTTAAATCATCCGCGCTCCTTACTGAGCTTAGCTTTCAGCGATTTGTATCTAGTAAAATCACAAGTTCTTGTGTTATGATTTTCCCATCCGCGCAACAGAACCTTGAAAACCAAATATCACAGTACTTTCAGGCGACAGCA # Right flank : GACAAAAAAATATTCTCTAATGGCAAACAAAAAACTCGCGATCGCATTTTTCAGGTTAATTTAATGTGTGAAGGATGCGATCGCGAGTCACAAAAAGTAGTTATCTAGGGGGTTGAAGAATTACTAGTGGCCACTGCCTCGTTTAAAACTAACTCTGGTTGTGGTGTTTCCTCTTCTTCTTCTGGCAAGCCGTAAATTGACCTGTACAATTTCACGTACTGCTTAGCAGATTGATACCAGCTAAAGTCTTCACTCATACCCCGTTTTTGTAGTTCTTGCCATTGGGGTTTGAAACGGAAGCCTTCCCAAGCCCGAATCATACAGGTGAAAAGGTCTAGCGGTTCGTAGCGGTCAAAACAGTAACCGGTGCCTGCTACATTTTCGGGGTCGTGGTGTGTTACGGTGTCAACTAATCCACCTGTGCGGCGGACAATGGGGACGGAACCATAACGCAAGGCCATCATTTGGCTAATACCGCAAGGTTCAAAGCGGCTAGGCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 1-237 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010000312.1 Desmonostoc muscorum LEGE 12446 NODE_312_length_9152_cov_3.39125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ==================================================== ================== 1 17 70.8 49 -------................. CCCTGATTTTTACTATTAATTAATTCCAATTTAATTGTTGAAATTTCAC 67 24 100.0 47 ........................ TTCCCCTGTGGTTCCCACGATTGTGGTGTTTTTGGTTGAAATTTCAC 138 24 100.0 52 ........................ TTCAACTTGAGAATCTTCAAGCTCTGCATTTGCTAAAGAGTTGAAATTTCAC 214 24 95.8 0 ......A................. | ========== ====== ====== ====== ======================== ==================================================== ================== 4 24 91.7 50 TTACTCCCTATTAGGGATTGAAAC # Left flank : | # Right flank : CACTGAGATTCATGATGTCGAATTTGAATTAGACGCGATAAATCGCCGTCTCTACAAAAAATTGATTATTGTAGAGACGGCGATTTATCGCGTCTCTTGCCTTAACCGGATCGCGTCTCTTGCCTTAACCGGATTGCAAAATTACATAAAAATCATCACATTCAGTAACGAAACACCAATATCCAGCATCCAAAATCCGAAGCTAACTATGGTGTTTGGAACTTTTTTTTTTAAAGGGTTGCCTCCTTGAATATCCAGCACTTGTGCTAATTCAGTTGTATTCAATGACTTCACGAGACTCAAACCAAGAGACTTACTAGAAATACTTTGAGTGTAGCTGGCGTTGAGATAAGGAATGTATTGTGACTTTCCTGCAACATAAGTTTGGAAGAAAGGCAAACTTAAAACATTCATATAACGACGCGCTTGGGAAGCATCGCCAATCATTTCAGCAGGTAATGATACTTGTTGATTTGTAGGGTTAGCGTTACCAATGGTGG # Questionable array : NO Score: 8.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.59, 5:0, 6:0.25, 7:-0.25, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 2617-1917 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXS010000387.1 Desmonostoc muscorum LEGE 12446 NODE_388_length_7941_cov_4.15984, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 2616 37 100.0 36 ..................................... TCTGATTTCCTCTACCGCTGCTAGTTCAGCTTTACG 2543 37 100.0 35 ..................................... TGATATTGCTAGTAGTTATTGCTGGTGTAGTTGTC 2471 37 100.0 39 ..................................... TGCAAAGACAAAGAATTAACTCAGTGGCAGATAAGATAC 2395 37 100.0 35 ..................................... AGCTTGGATACTGAAAGAGAAGATTTTAAATTATT 2323 37 100.0 47 ..................................... AACAATCTTTCTCACGCTGATAGCAAATACGCATTACGTATGGTAAT 2239 37 100.0 34 ..................................... GAAATACCCAAAAGCAAGGACTCAAACTCTTTGA 2168 37 100.0 36 ..................................... TTTTCCTTTTACTGTAAATAAAGTTGTTGAATGGCT 2095 37 100.0 33 ..................................... ATCTAAAAGCTTTTGCGCTCCTGCCGCTGGCAA 2025 37 100.0 35 ..................................... CACAATAAATCACTTGGAAGACCCCTCTTCTAACC 1953 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =============================================== ================== 10 37 100.0 37 ATTGAAATTTCATTTACTCCCTATTAGGGATTGAAAC # Left flank : GCGTAGCCCATTCTGACTCCTGAATTCTCAATTCTGCTGTATTTTTTGTGCGCCTGCTATTTTGGTAAAGTAGAACTTATGGGTGGTTAACCAGTGCGCTACGACTCTATTAGAACTAGCTTTTTCAAGGTGACCAACGAACATACGTTGTTTTGGTGTTAGCATCTTGAATCATCCGCTCACATTTTGGGCTTTTTGAAGATTGAAATAACCAATCTTCGTTCCAAATTTCACCAGCTTGAAAAGGCTAGTCCTGTCTATTTTCTTTGCCAAATGCGCGGATGGGTAGGTGTTAAAAATAAGATTTGGGGAAACAAGCTTCAAAGTAGGCTGTAGCAAGAGTTTTGCGATAAATAGTTGTGAAAGTACCCGCGCACCTTACACAGACTGGGTTTTGGCTATTTTATTAATACCTAATCTCAATTTTTCATGTTATGATTAGACCATCCGCGCTACAGAACCTTGAAAACCAAATACAGACTGTGTTTGCGGCTACCGCC # Right flank : ATGGGAAGCGATGACAAAGAAGAAATCAAAGAAAATTTTACGGACAACTGAAATCTTCTATGTAGAGCTTTCGTCCTACAGACCACTTGCTATCTGGAACTTTTAAAAAATCAAACCATGTCTGTTGACCACCCCCAGGATAGCAGCTTGGAGGGTTTTGAGGAGCAGCTTTACCTAGATAAACAGTGGTTCCTGCTGGCAAAGTTACTCTTTCTATAAGAGTAGCTTTATTACCCCATACTTGATTAAGAGCTAGATTTCTGATTGCTTGTAAATTTGTTTCATATTTGTCAGTTGTCACAAATCTACCTATCTTTTGAGTATCGTCACTATAGTAGCGATAAAAAGTCTGTGGGTAAGTTAGTATGACTTCTTTACATTTAGAGTTAAGGAAAGTAACAGCTACATCAGCAGGTAGAGGACAGTCAGCTGTTTGAGCAAGAACTCGTGGAAAATTGAACCCAAACTGTGAAGGCAAACTGGCTGAAAATAAGTTACTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAATTTCATTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //