Array 1 728520-728091 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNM010000001.1 Paenibacillus aquistagni strain DK1 NODE_1_length_996606_cov_33.9892, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 728519 32 100.0 38 ................................ CAGCAATCACGGAAGTATCAGCACATTTGAAGTAGGCG 728449 32 100.0 34 ................................ AATCGTCTTGCCATAGAAGTTAAGTTTCTCGGTG 728383 32 100.0 32 ................................ GTCGCTCCAGGGGATATGGTCACGGTGAAAGA 728319 32 100.0 34 ................................ AGGCATGGATGCAGACCAGACAGGCGAAAGAATT 728253 32 100.0 33 ................................ GCAAAGGTTGTACGCGAAGGTGATGAGTTTAAT 728188 32 100.0 35 ................................ TTGGAGAGCCAACCGTCTTTTGATCGCCTCGGGGT 728121 31 75.0 0 ..........G....A.G.T...-.G.A...A | ========== ====== ====== ====== ================================ ====================================== ================== 7 32 96.4 34 GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Left flank : CTGCCTTATGTCAGCAAGAAGGAGCTTCGCCAAGAAGAAGATATCATTATCGTGTCGCCCTCCAAGTCTCAGGTGAGACGTGCGATGCGCATTTTGAACAAGTCTGGCTTTCGCACAAGCGGGAGCATCGTCTGGAAGGAATCGAATTCTTTGCCTTGCAAGGAGAGACAGGCGTCATAATTGGAGTGTAGTGAAGCGGGTGGTTGTGCACTCGCTTTTTTGTTACCTTGTAATTTGTAAGAGTAATCATTTAACCGTATGTTCACGATGTTTGCTTTGCACATGTCAAAGTACTTGAAGGGAAATTGGATATGGCATCGAATTTATGTAAAGTGCGAATGTATAGCGCACATGATTTCCCTGGGGGATTCGCACCTGTTGCTGCATAAGGGCTGACGGCTTTCTTGCGCATTTTTGACATAGTTATATTTTGTCTTTTTAGAAGATTCGCACCTTTAGGCCTCTGAGCCCTTGCGGTGACTGGGTTCATCTTGGCCGCT # Right flank : CAAGGACACATGCAACCATAGTTATACAACCAACAAAAAGATCTATAAAGCAGATTCATATTGACAAATGTTAACTTTGTTGGGGATAATGATAAAGACCTAGGTGAAAGCAAGGAATATAGTCTTACATAACTATTATGCTCATATGAGTAACAGGGATAAATAGCATGCTTAAATTATGAATGAATGATCATATAATAGTTTACTAACGCGTGTTCTATTTTTTAAAATATAACAAACAAAATAAAAGCAGGTGAGCGTATGAGTTTTTTGAATAAGTTTAAAAAAGGTGTGGCTGAAGCAGGGACGCTAGCGAAGGTAACCGTTGAGGTGAACCGTCTCAAGCTTCAAATCTCGAACAAGAAGAAAGAAATACAAGAGCAATATTCACGCATAGGTGAGACTGTATTCCATATTCGACAGCAGGGAGAGTCGGAGGCAAGTCTTGCAGCTATTGATGAATACTGTGCGAAGATTGTAGAGATTCAAGGTGAGATGAA # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 111674-109970 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNM010000006.1 Paenibacillus aquistagni strain DK1 NODE_6_length_291504_cov_39.2529, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 111673 32 100.0 37 ................................ AGTAAGTGCGCCTTTTCCTGTGGTATCCACGTTTCAC 111604 32 100.0 35 ................................ CTAGGGGAATGAGTACGTGCTTACCAAACCAATCA 111537 32 100.0 34 ................................ ACATAATGTTGAACATGTGACACTATTTGCTCCT 111471 32 100.0 36 ................................ TTTAATGGCCTACTGTCTGAACGGCTGGTCATGAAG 111403 32 100.0 33 ................................ ATCTATCCAGTCATGGCATCGAGTACATAAGTG 111338 32 100.0 35 ................................ TCTTGCTCGTTGGAAGAACTTTACTATAAAGCGAA 111271 32 100.0 34 ................................ AGGATGCGGGTGACGCTGCCACACCTGATGCTAT 111205 32 100.0 33 ................................ CTTTTTCTTGAGCAAAACGAAAAAGAGCTTTTC 111140 32 100.0 35 ................................ TCTAATAGACTTGAAGAGCACTATAAAGAAAACCC 111073 32 100.0 37 ................................ CGTCTGGACAGTGGCGACGGCTCAATGCGTAGAAGCA 111004 32 93.8 33 ............AC.................. TATCAGCATGTGTTTAAGGATAAGGTCACAGAC 110939 32 93.8 37 ............AC.................. TATAGCAAAGCGAAGAAGACATTCATAGGACACTATA 110870 32 93.8 35 ............AC.................. AGCATGCTTTTAGGCTGTATAGCAATCTATTATGC 110803 32 93.8 33 ............AC.................. TGATGGATTTGCTTATGGTCACTCTGGCTTGGA 110738 32 93.8 39 ............AC.................. CTCGCACAAAACATATCGTCCGTGTAAAACCTCGTGCTA 110667 32 93.8 32 ............AC.................. GATGATATAAATTTAACATATCAGAAATCAAA 110603 32 87.5 34 ............AC.....A.A.......... AAGCAGCAATGCGTTGTTAGCCTCATCTTTGTCA 110537 32 100.0 35 ................................ AGTATAAGGAATATGCAGCAGCGATGAAGGGTAAA 110470 32 100.0 36 ................................ AAACTCTAGCAAAGTCGCAGGGGTAAACAATGCTTT 110402 32 100.0 36 ................................ TTATCTGGCCCCGCTGTGCTTCCGTTATCCATACTT 110334 32 100.0 33 ................................ CCAATGGTCAGCAATAGGGCAAAAACCGTTATC 110269 32 100.0 34 ................................ TGTATTAAAAGAAGTCTTGGTGTCTATGGTTGAC 110203 32 90.6 34 ............AC.......A.......... ACGAGAGTAAGGTGCAACGCATCTTAAAATCCTT 110137 32 96.9 36 ..................A............. GAGAATATCGCATACAGCTAGCGGCAAATGTACTAG 110069 32 93.8 36 ............AC.................. CTCAGGGCAGTATATTGCCAGATCTTGAAGAGGCAA 110001 32 93.8 0 ............AC.................. | ========== ====== ====== ====== ================================ ======================================= ================== 26 32 97.1 35 GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Left flank : GCCGGGACTGACGAGAGAGATTGCCGAGAACTCAATCTATGCGTACATCGAGCAGACGCTGAACCTGCAGATCAGCTACGCCCGCCGTGTCATCGAGGTGCAGCCGTGCAGCGAGGATGATCGCAAGTACCTGGATTTGAACGGGACGGAATATGTGGTCGTTGTCAAAAACTTTACGTATTTGTACGATGGGACGCAGTTCGAATATACGGAGTCGAGAATGCGGCTCGACAAATTCTATTTTTCCGATATTGCGCGGAGATCTTAATGTGAACTGCAAGTTGAGCAGCTTTGCTTATCAAGAAGGACTTGTTATCGCTGGTGCGAATGTATAGCTCACATGATTTCCCCGGGACATTCGCACCAATTATTTTACAAATAATTCTAGAATGATTACAAATTTGTAATATCTTTCGTTTGTAAGTATATGAATAAAGTTATAAATGGATTTTTGTGTTATAATTAAGGGTGATTTTTCTATTTTTTAACCAAAAATCGCA # Right flank : GGATCAGCGCGAGCTCCCGACCGCAGATGTCTGTCGCACCTTACACAGCTGCATAAGCCAGCTCACAGCCTTCAACTGCAAATCAACACATAAAAAGGTGCACTCTCCGCGAAAAGGAAGAGTGCACCTTTTTACTATCACTTCTTATTCTCTATCGCTTACACGTTGCGCTACAGCGATTTTACTTCAAACAACTCCTGCGATACGCCCTGCATAAAGGCGGTCGGTTCACCCGCATGGAAGATGGTCAGCTCGTGCATGGCACGTGTGCAAGCGGTGTAGAAGAGATTGCGCTCGCCTTCGTCGTTGAATTGCTCAGCGGAGGCGTTGTAGATGACTACCGCATCGAACTCAATGCCCTTCGCCAAGTAGGTCGGGATAATGACTAGCCCTTTGCTGTAGGAGCTGCTTTCCTTCTCAACCAAGCGGAAGGGCAGTCGATCACCAATTCGCTCCGCTGCTGCGCGCGCCTCCTGAACCGTTTTACAGATGATCGCGAT # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCTTACACAGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 184907-183128 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNM010000006.1 Paenibacillus aquistagni strain DK1 NODE_6_length_291504_cov_39.2529, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 184906 32 100.0 35 ................................ AACGTATTCGCAAGCTATATGCTGATTCAGCAGAG 184839 32 100.0 35 ................................ CTTGAACTGGATCTACAAGATCACAAGAGATGATA 184772 32 100.0 33 ................................ ATCACTACGCTTAATCGTATTAGGCAGGATGCG 184707 32 100.0 37 ................................ GAAAGACTGAAGATGCAATTGAAACTCGGAATATAGG 184638 32 100.0 35 ................................ CTCGTTTACTCTCGCCCATAAACGAAACAACCGCG 184571 32 100.0 35 ................................ ATTAATATCCACACCAAACATGTTTCCTAGTACAA 184504 32 100.0 36 ................................ ATTTCGCTTCTCCTTCCTTGGGGCTTGTCCACTATA 184436 32 100.0 34 ................................ AACAAGAAGAAATACCTTGCATCATGGAACGATG 184370 32 100.0 33 ................................ TGTTTGTTATGGGCCCGCCCGTCATAGTGATAC 184305 32 100.0 33 ................................ AACAGAAGAACAATGTACGAATTTTTAGCCGGA 184240 32 100.0 37 ................................ TCTATGCGTATTGCTAGGATCGAGAGCACTTTGTTTA 184171 32 100.0 38 ................................ GCAGAAAAAAGACACGAAGCCGTCACAAACAGTGATGC 184101 32 100.0 37 ................................ CACAACGGATACAGCGTGATCGATATACAATGATCTT 184032 32 100.0 38 ................................ AATAAGTACATCATGGCCAAATGTATGCCTGAGACTAT 183962 32 100.0 36 ................................ CTCAGATCATGAACAAAGCATTGCCTAAGGTAACAA 183894 32 100.0 35 ................................ AGCGTCTGGAAGGCATCGTTGATAATCTCAGTCTG 183827 32 100.0 38 ................................ CGCAACTTTACCATTTACAATGATTTCAACATCAGAAG 183757 32 100.0 31 ................................ GAATATTCATGATCAAAATAAGTGTTGTGGC 183694 32 100.0 33 ................................ ATTAGTCAGTTACGGGGCTTGGGTTACGAAGTG 183629 32 100.0 33 ................................ AGACGGTCATGCTCGTACCGTTTTACAACGCGT 183564 32 100.0 35 ................................ CTGCCGCTTCCTTTGCTTAGCATCTTTGATGGATA 183497 32 100.0 35 ................................ TAGTTTGAATTCTACCATCTACACCAATCATATTA 183430 32 100.0 38 ................................ TACCAAAATAACCTCTGTCAAAGAAGATAACTTTATCA 183360 32 100.0 34 ................................ ATATCCAGCAGTAGAGAATACACAAAACATTACA 183294 32 100.0 35 ................................ AGGCGGTGCCATCAGAGTACATCAAGCAAGCAGAG 183227 32 100.0 36 ................................ TATGTCACCGCGATAAGCGATGCAGACAAGGAATCG 183159 32 96.9 0 ...........................T.... | ========== ====== ====== ====== ================================ ====================================== ================== 27 32 99.9 35 GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Left flank : AGAAATTAAATCATGCAGAAGAGCAGTATAAGGACAATGTGATGGAGATGGAAGGAAGCTTTAGCGATATTACGTTAGATGAATATAAAGTGGGTTGCTGGGATAAAACGACTAATGCTAACGAAGAAGAGAGTAAGGTAAGCGATAATAAAGTAGTAGTGGGGGAAAGAACCATACTCTCTTTGATCTTTCAGTTGAATCAACTACTGATGTTGATTAATAATCCGTTGCTATTCCCACATCAAGCATATGTTAAAATGTTTAATAGGTGTCTAAATGAAGAAGAGGTAGAATCTATTCCACAATCTACTATAATATGAAAGATGAGGCGTGGTGCGAACCCCAAGTGCACATGAAATCCCTGGGCGATTCGCACTTCGCTCTACACAAGGGCTGCGGGCATTTTTGAGCACAAATGACATTGTCAATTTGCATGAAAAAGTGTGATTCGCACTATTGGGGCTGTGAGCCCTTGTGCAGCGGGGCCTCCCAGCGCCGCT # Right flank : TGGAAAACGCATCTAGGGGTAGCAAGTTTGTCACACCTCACATAGGTGCGCTAACCCAAAGTCGTATCATTACAAAACAACATATCCATTCCTTGTAGACTATCAATTGGAGTGTGTGAACGAAAAGCGAGTGTATGTGCACTCGCTTTTTTGTCTAAAAGAAAGAAAATAACTCGAATATTGAATCGGAACATACATTCTCTGACAAGATGCTGTCATCCTATTCATTTATGATAGATCTAAGAAAGGGAGGAGAGCAATTCGTGACAAGTGAACAACAACTTCATCCGAATGTGATTCCATATTGGCGTATCACTCGACTAATCGCACTTTTTAAAAAGTCCGCGGTTGCAGGGATCCCCATTACTGTTCATCTCATTTGGCTGCCCACATGGACATGGATCCTATATGTCACCGTTACATATGTTTTATATTTATGGCTTACTTCTCTATTTTATATTTTCTATGGTGTACGGTACATGTATATCCGCAGAGGATAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 194350-192777 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNM010000006.1 Paenibacillus aquistagni strain DK1 NODE_6_length_291504_cov_39.2529, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 194349 32 100.0 33 ................................ AGTGATGAGATTCGGGACCTTAGCCCCTCCTCT 194284 32 100.0 35 ................................ AACATCTGGACCAGACAGGGGTATCCGATCGGACA 194217 32 100.0 36 ................................ GAATTTACGCGTACGTTCCTCTGCCGCCCCGTAACT 194149 32 100.0 34 ................................ TTTGACCTGTCTCTTGGGGACAATGAGATTACTT 194083 32 100.0 37 ................................ AATATCGTAAAACATATATTCGAGTACACCTGGAACA 194014 32 100.0 36 ................................ AATATATGGATGTACACCCATGTTGCTACTACCATG 193946 32 100.0 36 ................................ CCCTCTAAGGAGAGTCATCGTGGCTAAAATCACCAG 193878 32 100.0 32 ................................ CGGACCGTGTGCAGATCTTTGCTTATTGCGTC 193814 32 100.0 34 ................................ ATGGCCGTAATAACCGTTGTGGTTATTATATGCA 193748 32 100.0 38 ................................ CATATCGGCTCCAAAGTCCCACACTCCATTACGCCCAG 193678 32 100.0 37 ................................ ACCGTAGGGAAGATTGTAAGGGTACAAGATCAAGAGC 193609 32 100.0 35 ................................ TACCCATGTTGGGCCGAATTTTTTAAGGTCTTTAG 193542 32 100.0 33 ................................ AGTTTATTGGTGCGTTGTTCCTGGGCTTTTTTC 193477 32 100.0 35 ................................ CTACGAATGAAGCGGGTGATGTCTTCCCGACTGAC 193410 32 100.0 34 ................................ ACCAAGCGGCAGCCATTCATCATTGGTGCCAGTC 193344 32 100.0 35 ................................ CTCTAGCCGGAGTTTGAGCAGGCATCTCCCCTCAT 193277 32 100.0 36 ................................ TAAGGCTAAAGGCGGCAAACCAGTAGAAAAGAATAT 193209 32 100.0 34 ................................ TGGTACGGGTGTAGGTGACAATGGCAAGGGCTTT 193143 32 100.0 36 ................................ TAAATTATCTATTGCGTATTGTGCTTCTTCCTTAGT 193075 32 100.0 37 ................................ CGTTTTAATGATGTTTGTTGTAATGCTAACAATCAGC 193006 32 100.0 35 ................................ AAAGTCGCGGCAGCTCATGGATCGGTATGCATATG 192939 32 100.0 35 ................................ CGTCTGTGTGTGCTGATGGTGTTTACGAGTTTGAG 192872 32 100.0 33 ................................ AACGAAGTACAGGTCATCGACAGTAAATGTGTC 192807 31 81.2 0 ...................T.-.C.....TTC | ========== ====== ====== ====== ================================ ====================================== ================== 24 32 99.2 35 GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Left flank : AGCCAATCGCCCACAACAAGATATAAAAATTGGTAAAACCATCATAATAGAGAAATGTTGCAAATGTCAAATTTATTTTTTGTAAGCATCTGAGGGGAGAGCGGTCGGCTTAGTTCATGGTTGATGCTTCTAGCGTTTGTCTTCTTTATCACAAAGTACCTTGATTGAAGTTTCGAGCTTGCCTTTTTAGTGAGCGAGCAGTCTTTTTGATTTGTGCCAGCACCCAATGTGATAGAATCATAGATATGACAAATTAGGTGTAATATACTAATAATGATGGTGTAAAAGTCTTAGCCTCCCTTGCTGCGGAGGTTGTGAGACTGAATTAGATTGGTGCGAACCCCAAGTGCACATGAAATCCCTGGGGGATTCGCACTTGGCTCTACACAAGGGCTGCGGGCATTTTTGAGCACAAATGACATCGTATATTTTTATGAAAAATTGTGATTCGCACTATTGGGGCTCTGAGCCCTTGTGCAGCGCGGCCTCCCAGCGCCGCT # Right flank : GGTAACACAGACAAATTAGATGTAAATTATGATGAATTGAGGTGTTAAAGTGATAGATCAAGATGGCAAGAGGCAAGAGTTAAAACGATTGCATGACATCGTAGATAAGGTGTCTCAGCACCAAAGCACGTTACAAGAACGCTATTTCATAAAGGTGGTAACACCTATGTTGGGGGGAAGCAGTAAACCTGGTGATGTCGATCCACGTTTCCCGATTCGAAGTGCTTCAATTCGCGGACATTTACGTTTTTGGTGGCGAGCGACAAGAGGAGCCCGATACGAGACGGCTGAAGAGTTAAGGAAAGTCGAATCAAATATATTTGGCGACACACAACATCCTAGTAAAGTTAAAATATGGGTTGATCAACCAAAATGTGTACATGAACCGCAAAAAATAGAATTCAAGAAACAGCTATCCAATCTCCGCTATGTTTTATTTCCCTTTGAAAACAAGCGGTATTTATCGAAAAAGTGCAGCAACAAACAATGGAACTCTCAAC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //