Array 1 114271-113048 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQRU01000008.1 Streptococcus sp. LQJ-218 scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 114270 36 100.0 30 .................................... AAACATAAGCCAGAAGTGATTAAGCCAGAA 114204 36 100.0 30 .................................... AACTGCTGATTGGAACGACTGAGCTTTGCG 114138 36 100.0 30 .................................... TAAGTCATTTCCGATTTGTTGCACGCTGAT 114072 36 100.0 30 .................................... AATCAACACAAAACGCAAGAATTACAACTA 114006 36 100.0 30 .................................... CTTTGCTATCTTAGCAATGTCCGCAATGAA 113940 36 100.0 30 .................................... TGTTTCATAATTTCATCTTGCTGACCTAAA 113874 36 100.0 30 .................................... CTCTGGCTAAAACAGAATTTCAAAAAACAG 113808 36 100.0 29 .................................... TCGTTTGCTATCTCAAAGCTTATCTACTT 113743 36 100.0 30 .................................... GCTTGTTGATGTTGAAAATTTTAACTGTAA 113677 36 100.0 30 .................................... TTAACGCAAGCACACGCTTGAAGTTAGAAG 113611 36 100.0 30 .................................... AAACTACAAGAGTGTATTGATAATCTTAAT 113545 36 100.0 30 .................................... CAGTATCTTAATTTTGTTATCGGTGGACGT 113479 36 100.0 30 .................................... TCATATCTGCAATAGAGATCTTATCAATCG 113413 36 100.0 30 .................................... ATCAGCCATTCTTCTGTTCTTCATGAGTGC 113347 36 100.0 30 .................................... CCTAAAATCACTGCGCCAGTTCCTAATAGC 113281 36 100.0 30 .................................... AAAATAAGATGAAGAACTATGGAATTACGA 113215 36 100.0 30 .................................... AGTTCCAACTTCAGCAGTGATACGGCCTTC 113149 36 100.0 30 .................................... CACTTGACGGAAAGGCTCAAATCCAACAAT 113083 36 94.4 0 .................................CC. | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTCAAGTCTATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGTTGTCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACCCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTCTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATGTCCAACTCAATCAACTGTCCGTCTTGTTTGTTGAGCCTCGGAAAATCTATGATTTTCCGCAGTATGTATTGGATCAAGACTATTTCTTGAACCCCGAGAATATGGTATAATAAAAGTAAGAATTGGGACCTGACGATCTGAAGTCTAGCTGGGACGAATGGCGCGATTACAAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : ACATTAAAAGCTACTCATTTTTAAGTAGCTTTTTTCTTATTCAAGTTTAAATATTAGTCGTCACAACCCCATTCCCCTGTAGAAAAGCAAGACTTCGAATCCTACGAACAACACTAACGCTACCAGTCTCTGACTAGCGCTATACATCCGTCTTTCTCCTCGAACTGGAAAGATAATTGCTAGAAATGCGCCACCAACTGCACCACCGATATGGCCTGCTAGGCTGATTCTTGGAATCAGAACACTTCCAATAATGTTAACCACAAAAAGTGTCAGATAAGATTGCCCTAGCTGCTGGATATAAGGATTACGCGTTGCATAGCGAAGAACGATAATCGCAGCAAATAATCCATAGAGAGAAGTCGAAGCTCCTGCTGCTAAGGATTTTGGACTAAATACAAAAACAAAGAGGTTGCCCATCATTCCAGATAAGAGATAGAGAAAGAAAAACTTCTTGGATCCGAAAATTTCCTCTACTTGCCTACCAAGATAATAGAGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //