Array 1 197810-195530 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOAP01000003.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================== ================== 197809 36 100.0 34 .................................... TTCCTGTCGAAGGCCATGGAGGCCGGCGCAAAGC 197739 36 100.0 37 .................................... AAGCGGCGACGGCTCATCATTTTTCAACTCCTCGGGG 197666 36 100.0 38 .................................... ATGATAGACGTGATTGTCGCGCCCTTGGGGATTGAAAA 197592 36 100.0 36 .................................... GCGGTCAGGATGCAGATCCCTTCCTTTCCGTGGCCC 197520 36 100.0 35 .................................... CTATCGGCACCTGGCCAAACCGAAGTGCCGATGAT 197449 36 100.0 35 .................................... CTGCTGATGACGGCATTGGCATCGGCCAGTTTCAT 197378 36 100.0 36 .................................... CTCGGGCGTCTTCACGTCGCGCTTGCGGTAGGTCTT 197306 36 100.0 35 .................................... GCGTCCGTGTCCACCATCCACACCTTCCACCCGGC 197235 36 100.0 35 .................................... CCTGCTGGCGGAGAAGATCAGCTTCGACTTGCTGG 197164 36 100.0 30 .................................... GCGCAAGGTGCGGTGAAGCACGACCCAGGC 197098 36 100.0 33 .................................... CTCACGCCCCCCTCCTGGTAATGGAGGGTGTTG 197029 36 100.0 36 .................................... CTCAGCACCTCTTCATTCGTGCCATGGGCGCACACC 196957 36 100.0 36 .................................... AGGCGCTGCAGGGCCTTCTGCTGGGGGGTGGTCAGG 196885 36 100.0 36 .................................... ATCGGCTTCCGCTTCTGCCAGCCCTCGGGACCATCA 196813 36 100.0 35 .................................... CCGGCCCGGGAGGGCAGTACCGGAGGGAAGAGAGC 196742 36 100.0 41 .................................... GCCAGGCCGGATCCTAATCGTCGAGGACGAGCGCGAGATGT 196665 36 100.0 34 .................................... GTGGTGCCCGGAACGCTTGTCTCCCGCCCCCGCG 196595 36 100.0 36 .................................... GAGCCCCAGCACCCGGCGCGTGTTGCCATCCGGCCA 196523 36 100.0 36 .................................... TTGTTCCCCGTGGCCAACCAGCAGCCCACCACTGCG 196451 36 100.0 37 .................................... GAGAGCTCGATCGCGGAGGAGCTGGCCGGCAGGCGCC 196378 36 100.0 35 .................................... GCACGCATCGGTGGAATCATCCAGGTGGCCGTTAA 196307 36 100.0 37 .................................... GTGCCGGGGCTCCTCCTGACGAGAGCGAGCGCGCCGA 196234 36 100.0 37 .................................... TGGTGGGCGGACGGCACGACACGCAAGGTGCGCGGCG 196161 36 100.0 40 .................................... AACCTGAAGACGATGATGTGCCTGCTGGTGCTGGCAACGA 196085 36 94.4 34 A..G................................ CAGGAGGCACCAGTGCCCACAGCGCGAACCGTGG 196015 36 100.0 35 .................................... ACTTCTTTCAAGAAAGCAGCAGAACAGGCGAAGAA 195944 36 100.0 34 .................................... GATGAACTGGCGGGTGGGCATCAGAGCACCACCA 195874 36 100.0 36 .................................... AAGTCGTCCACATCCATGCCTAGTAATCGAAGCAGC 195802 36 100.0 35 .................................... ATCGAGGGCACGGAGAAGATTTCCCGCGTGGATGT 195731 36 100.0 36 .................................... CGTGACCTCATCTTCTTCGTGCTGGGCTGGCTCACC 195659 36 97.2 58 ........C........................... ATCGAGTTCGTCCCGTACATCAACATTAAGGAGGGTTCCCCTTGCCGTGATAAGGAGG 195565 36 91.7 0 ...................T............A.G. | ========== ====== ====== ====== ==================================== ========================================================== ================== 32 36 99.5 36 GTTCCCCTTGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : CATCCGGAGCCCGAAGCGCTGGAGGAAGGTGTACGAGCTCATCAAGGGGTACGGAGAGCGGTTGCAACTGTCGGTGTTCCGGTGCTCGCTGACGGACCGGGACCGGGAAAAGCTGCGGTGGGAGCTGGCACAAGTGATGGAAGAGGAGGACACCCTGCTGGTGTTGGGGCTGTGTGGCGGGTGCGTGGAGCGGGTGAGGGCGATCAACCCGAAGGAGGGGTGGCCCGAGGAGCTGCCACCCTTCCGTGTGCTATGAGACATTCAAGCATCTGGCGGTGGCGGAGGAGGCGAAGGAGGAAAACGGTGAAAAGCGTCAGGAAGAACAAGGGGTTGAGGGCTCTTTGACAGGTGAATAGGTGCATGATCGAGAATTCTTCAGAAGTTCCAAGGACTTGGAGAGGTAGGACAGGAGAGAAGCGAGTGAAGGGCGCCAAGGAGGTGGGGGTGCTTGAAAAGGGGGGGTGTAAGCAGGCGAAAGAACGAGGAAATTAGCTCGGGCG # Right flank : GTCCCTGGGGGAGGGCGTATTTGAAAGAACGCGCAGGTTTTGTTGGAGGAGAACGGCTCCTGCCTTGACGCACAAGACCGGGCTGTTCGAAGACAGGGCGTGCCCATGAACGTCCGGACTTGCAGTGCCCTCCTGGTGCTCGCCGCCGCCTGCGCTACGACGCAGCCGACTCCCAAGGTTTCAATGGGCGGCAGCCCACGAAGAGCCAACCTGCAACGGGCGGCACAGCTTCCCTGGCGGGATGAGGGGCGGTGTGCCGTCCAGGAGGCCGCTCAGCCCTGGCGAGACTTGGTGCACAGGTGCTACCCCGCGCTTGATTCGCGCAGGATGCGTTTCCACGATACGGAAGGCGTCTGTCCGGTGGCCACCGTGGGCGCGGCCACGGTGCCAGCAATGGTGGCCATCTGCCTTCTGTCGCAGCCGTACATCGTCGTGGGCGCGGTGGTGGTCATCGGCGCCGTGGTGGTGGCTGTCCCCATCCAAGAGGAACTGGAGGCGCA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCCTTGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //