Array 1 276354-277511 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANCY01000011.1 Streptococcus agalactiae CCUG 91 ctg120001085647, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 276354 36 100.0 30 .................................... ATGAGTTCCCTTATCTTCGCAATCAGTTCA 276420 36 100.0 30 .................................... TTATTCTATAAGGTTAAGTTTGTTATTTAT 276486 36 100.0 30 .................................... TCCCTATTACAGATAGTTATTGGAAATATT 276552 36 100.0 30 .................................... AATAAGGCGAAAGGCAATTGAGCCAAATTC 276618 36 100.0 30 .................................... AGAATATCTAATTTTTAGGTCTGACATTGA 276684 36 100.0 30 .................................... AAAAAGGATTATCTCAAGAAGAAATGTCCA 276750 36 100.0 30 .................................... TATTGATTTAGCTGTGTAGTTGTAACTACG 276816 36 100.0 30 .................................... TTTTGCTAAGTCTGCAACGCCTTTAATAAT 276882 36 100.0 30 .................................... CTTTGTAAAAATTTCTTTAACTAATTCATG 276948 36 100.0 30 .................................... TCTCGATGGAAGATTTCGAATTAAAAACCA 277014 36 100.0 30 .................................... CATCTAAAGCTCAAGAAGTTAATACTATGT 277080 36 100.0 30 .................................... TTTAACAAAATCATAACCTAAAGGGGTATT 277146 36 100.0 30 .................................... TATTATCAGATACGCTAAAACCAGTAGTTC 277212 36 100.0 30 .................................... TTCAAACGGAGTTGCTTTTAAAAATGGGGT 277278 36 100.0 30 .................................... ATCCAAAAACTGGTGGACACGGGATCCTTT 277344 36 100.0 30 .................................... CTACACGCAAGATTACATGGCTTCTCAGTT 277410 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 277476 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //