Array 1 36703-36139 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVGN01000022.1 Streptococcus dysgalactiae strain INFECT2027_SDSE NODE_22_length_36819_cov_63.5614, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 36702 36 100.0 30 .................................... CTCGACGAATTGACAAACGAAATAAACAAA 36636 36 100.0 30 .................................... GGGATAATTTTGCGAAGCAAAATTCACATA 36570 36 100.0 30 .................................... AGGTTGCTTCGGAAATTATTGAGAAGTTCT 36504 36 100.0 30 .................................... TGGATACGAAGGTGGTGTGCAAGTTACTCT 36438 36 100.0 30 .................................... TTGATGGGATGTCATCAACCTTGATAGCTT 36372 36 100.0 30 .................................... CATTGAGCAACATTCTCAAAGTCTTGTATG 36306 36 100.0 30 .................................... ACCGACATCAATGCCGGTAGCAAAAAATTA 36240 36 100.0 30 .................................... ATTGTAGATATCCCATTCATCTCTTGTAAT 36174 36 94.4 0 .................................TT. | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 99.4 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CTAGACATATCTGTTCTCCTGTTTTCTTTAGTGTAGAACACTTTATAAATTCTGTCTAGTTTAGTGTAACCGATTCAGGTCCCAAAACTAGATATTATATTGTTTGTCTTCAATCT # Right flank : AATATCGTCAATATGACTTGAGAGAGGGATAAATACAATATCCTTATGCCTTCCCATTCTTTCTATTTAAAACGTTTTCATGTTATAATAGTCAAAAGGAGAAGGAGGGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCGGATGGGGTTGAGCGAGGGTTAGTTGGAGAGGTTTTGCGGCGGATTGAGCGTCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGTCCGGAACTCTTGGCTAAGCACTACGAAGCCTTGGTAACTAAACCATTTTATCCTGAGCTTGAAGCTTACATGACAAGTGGTCCTGTTTTAATTGGGGTGCTGTCGGGAAATCGGGTGATTTCCTCTTGGCGAACCATGATGGGGGTAACTAATCCTAAGGATGCTCTTCCCGGGACCATTCGTGGTGATTTTGCCCAAGCTCCTGGTGATGATGGAGGTATTTTTAACGTGGTGCATGGGTCTGATTCAAGAGACTCTGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 102134-102761 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVGN01000005.1 Streptococcus dysgalactiae strain INFECT2027_SDSE NODE_5_length_119677_cov_98.5524, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 102134 32 100.0 35 ................................ TTTAAAAAATGGGAAATCCTCTTTTGTTTTAGCGT 102201 32 100.0 33 ................................ AGCGTTACTATGGGAATGTCAAAAGGTTATTGC 102266 32 100.0 35 ................................ TCACGGTGTCGCTAGCAAAATTAAACAATTTAAAC 102333 32 100.0 35 ................................ AATAACAGTGGAGCTATGATCCTTAATCATGCACC 102400 32 100.0 34 ................................ GACTGTTGGCTCTTTTTTATTTTTGTCATCGTTA 102466 32 100.0 33 ................................ CTCTTGATATGGTTAATAGCGTCTCATACTCTA 102531 32 100.0 35 ................................ TCATGATTATGAGTTAATTGTAGCGCAATTAAACA 102598 32 100.0 34 ................................ TGAGGGAAGCGGAATGAAGAAACCAAATCGTTAC 102664 32 100.0 34 ................................ GATGACGATAATTACGAAGTTATTGAGGTGACGG 102730 32 90.6 0 ............................C.TC | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.1 34 GTCTCACCCTTCGCGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACTGAAACATCGGCGGGCAGAAAAAGATTGCGTCATGTTGCTAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCGGAATTTGTGGATATAAAGCACCGATTAACACAAATCATTGATGGGGAAACAGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAACCTAGGTTTCACAGAAAACCCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTCTTCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCT # Right flank : CCTAGATTTTTGATGGATCTATTTTGAGTTTTTCTTCACTCATAAATTTCCATTTATTTTCTCCCCTCTCTTTCCCCCTCACATATGCTATAATAAGCTTAACAAATGCATGGTAAAGGAGTTAGGATGGCTAAGGTTCGGTATGGGATTGTGTCGACGGCGCAGGTGGCCCCTCGTTTTATTGAGGGGGTGCGCTTGGCTGGCAATGGCGAGGTTGTGGCGGTGTCCAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTGCCTAAGGCTTATGGTAGTCTTGATGACATGTTGTTGGATGCGTCGATTGATGCCATTTATGTAGCAAGTATCAATCAGGACCATTTTCCTGCGGCTAAGAAGGCTTTGCTGGCAGGCAAGCATGTTCTGGTGGAAAAACCGTTTACCTTGACATCTGCTCAGGCTGAAGAACTTTTTGCTTTAGCGCAAGAGCGCGGCTTGTTTTTGATGGAGGCTCAGAAGGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCGCGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 465-98 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVGN01000018.1 Streptococcus dysgalactiae strain INFECT2027_SDSE NODE_18_length_38618_cov_64.2319, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 464 36 100.0 31 .................................... CTTTAAAATGAATTGTTTTATTGATTCGTAA 397 36 100.0 30 .................................... TATGCAATCAACAGGACTTTTTGATAAAAA 331 36 100.0 30 .................................... TAGTGTTAGGTGGAAAATCAAGAAAACTCT 265 36 100.0 30 .................................... TACATGACCTCGGTTCGAGCTAACCTGAAC 199 36 100.0 30 .................................... AAAGTTACAAGAACCACAACGTGTTTCAAT 133 36 86.1 0 ............................GAA..GG. | ========== ====== ====== ====== ==================================== =============================== ================== 6 36 97.7 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : AGAAACCCGAAGTGAAATCGATGATTGACAAATTGGTTGCTACGATTACAGAACTGATTGTCTTTGAATGCTTAGAAAATGAATTAGATTTAGAGTATGATGAAATCACAATCCTGGAATTGATTAAGTCCTTAGGAGTAAAAGTAGAAACGCAAAGTGATACTATTTTTGAAAAATGTCTAGAGATACTTCAAATTTTCAAATATCTCACTAAGAAAAAGTTGCTTATTTTTGTCAATAGCGGAGCTTTTCTAACAAAGGATGAAGTGGCTAGTTTACAAGAGTATATATCATTGACAAATTTAACAGTTCTCTTTTTAGAACCACGTAAACTATATGATTTTCCGCAGTATATTTTAGATAAAGACTATTTCTTAATAACTAAAAATATGGTATAATACTCTTAATAAATGCAGTAATACAGGGGCTTTTCAAGACTGAAGTCTAGCTGAGACAAATGGCGCGATTACGAAATTTTTTAGACAAAAATAGTCTACGAG # Right flank : CAACACTTTTCTGAACAATTTTTATAAAGTGCTTTTTAAGCGATAATTCGTTTGGTCATGGGAGTTTGGTAGTTAAGACTACCATGAATGCGATGATA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //