Array 1 11191-9150 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWB01000015.1 Streptomyces coelicoflavus strain NBRC 15399, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 11190 28 100.0 33 ............................ CGCGTTCCGCGGGTGAGACCGGTTTCCCGGACA 11129 28 100.0 33 ............................ CCCGGAGCCGCCGGAGCTGACGTACGGCACTTT 11068 28 100.0 33 ............................ GGCGGCATGGTCACCGCCGGCGTCGGAGGCCCA 11007 28 100.0 33 ............................ TGGCGGGGTATGTAGCAGACCGCTGGCACAAGA 10946 28 100.0 33 ............................ GCTGGACGCGGGCGAGTACGACGGCGGCGGCAT 10885 28 100.0 33 ............................ GCCTCCCGGACCGCCGTACCCCCGCCGTCGCGC 10824 28 100.0 33 ............................ CAGATCCCCCACACCTATGCATCACGACCAACC 10763 28 100.0 33 ............................ CCAGGGCACGGTCCGACACCTGGACCAGGTGCC 10702 28 100.0 33 ............................ CTGCCGAGGAGCATGCCGCCCGACCCGGTTCCG 10641 28 100.0 33 ............................ CTTCACCGACGACCTTGCCCGTCCGGCCGGATA 10580 28 100.0 33 ............................ CGGGGTGTTTCGAAGTGATCCGAGAGCAATCCG 10519 28 100.0 33 ............................ GGCCGGACGCCCGGGCCGGCCGCCGATCGACTG 10458 28 100.0 33 ............................ GGCTTTTCCCATGGCCTCGACGACCTCGGCGAC 10397 28 100.0 33 ............................ GCTCACGAAGCTACTGGAAACCTACTGGACGCA 10336 28 100.0 33 ............................ CGGGGCCGCCTGCGCCGTGACCGGTCACGGGCC 10275 28 100.0 33 ............................ CCGGCAGCCCGCGTTGTCGTGCTGGTGGATGTG 10214 28 100.0 33 ............................ GAGATCTCGAGTGCGCCGGACACCATGGCGCCC 10153 28 100.0 33 ............................ CGGTCTCGACACCGGCGTGTACGTGGAGGACTA 10092 28 100.0 33 ............................ CGCGGCCGTGGTCCGCACGCAGGAGTACGACGC 10031 28 100.0 33 ............................ GCAGCAGGTCGTCGCGGCCCGCCCGTTCGTCAC 9970 28 100.0 33 ............................ GCGTCGACGGAGGGCGGATGGATGGCCGAGCGA 9909 28 100.0 33 ............................ CCAGCGCATGTCGACCTTCGGCGGTCTCCTGCG 9848 28 100.0 33 ............................ TTGCAGGACCGGGTTGCCGGTGGCGTCGACCAG 9787 28 100.0 33 ............................ GGCCACCTGGATGTCCGCCGCGGTCGTCTCGGG 9726 28 100.0 33 ............................ CAACGGGCCGCTCCCGGCACTGGGGAAGATCGC 9665 28 100.0 33 ............................ CCTGATCTTCGGGCCGGGCGCGCACGGCGACGG 9604 28 100.0 33 ............................ CGCGCTGTCCAAGCAGATGGCCGGCGCCCTGAC 9543 28 96.4 33 ..T......................... CTGCACCCCGGCCCGCCCGTTCGACGTGGCCTT 9482 28 100.0 33 ............................ CCGCGAGTCGTCCAACCTGGGCGGCTTCGTCGA 9421 28 100.0 33 ............................ CAGGATCACCGCGTCGCCCACGAACGACGCGAG 9360 28 100.0 33 ............................ GAGGAGTTGGCCAAGGTCCTGGAGGTGCACCGC 9299 27 96.4 34 .....................-...... GTCGGGGAGGCGGTAGACCGGGGCGGTGTAGGTC 9238 28 89.3 33 .............A...C....A..... CCCGTTCTTCGCCGGGGGCTGGGCGGCGCGGTT A [9214] 9176 27 92.9 0 .................A.......-.. | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.3 33 GTCGTCCCCGCACCCGCGGGGGTAGCTC # Left flank : CCCCCGGCAACCGCCCCAACGACAGCCCCGCCGCCAGCACCGGCGCGGCCTCGGCCGCGTCCATGGCCTGGAATGCCGGGCACGCCTTGCCACAGTCGTGGATCCCACACACCCACATGAACCACACCCGGCCCCGGCCACCGCTGACCTCGTCCAACCGCCGTCGGAACGCGGCCGACACGTACCAGTCCCACATGACTCCGGCCACAGCGGCTGTGTCCAGCAGATGTCCCAGCAGCAGGTGTGTTCGGCCGTCGTTGCGTGCAGCCGACTTCCCCCACAGCCGCGACACGCGCGCAACGTCCTCGTCTGCCAGGCCCATCGACCGCATCAACTCGACGACCGACCGCTCATCCTCCACACCCGCCCCCTGAAGACTCGGCTGCTCGCAGCCAGTTGGTGCCGGCACTGTAAGCGGAGCCACTGACAATGCTCTCCGAAGCCCAAACGATGTGAAGGAAAACAGGTACCCTCGCCCACATCTCCGCAGCTCACAAAGT # Right flank : CCGGCCTACAGCTCCGGATTTCTGCACCCCCTAGATTGATCACGATCTCAGCACCTTACTTTCACAAATCCCCCACATGGGCGCATGATTCTCCCTACACGCCAGCCACAGGGGGACCAGTGACCGACAGCCTGCCGCCGATGCCCGACCATCAGCCCCAACCCACAACCCTGGCCCTGGACAGTCCGACGTCGACCAGAAGACCCCGGAACTGGGTGGTCATTGGCGCGGCAGCGGCTGTCATCGCCGCAATCATCGGCACGGGCATCGTCGTCGTCCAAGCCGTAAACAACGACGACAGCAACAAGCCCGCCGCGGCCGCCACCGAATCCAGCGCCCCCGCCGACCCGGCCACAACCGTCGACGACGTACCAGTACCCGACCCCGAGCCCGTCTTCGCGGAACCCGCCGTCGGTGACTTCACCATCGAGCTCCGCACCACCAGTCGGCAGTGCTTCGGATCGGCGGGGTGCAGCGTCACCGTGGAACCCGAACTGTCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 21678-23398 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWB01000015.1 Streptomyces coelicoflavus strain NBRC 15399, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 21678 29 100.0 32 ............................. CTCCTCCGGTCCCTGCCCGACCTCACCTCCCA 21739 29 100.0 32 ............................. GACGGAGGAAAGCCACGTGACGTTGCCGAGAG 21800 29 100.0 32 ............................. CAGCTCGGGCTGACCGAGGACGAGGCCGCGCG 21861 29 100.0 32 ............................. TTGGCGCGGCGCTGGTACTCGGCGATCCCGGA 21922 29 96.6 32 ............................G AGGGTCGGGTTCTGGCGGCCGGATTCGATCTT 21983 29 96.6 32 ............................G CCGTCGGTCTCAGCGTCCGCGCCGTACCTGTC 22044 29 100.0 32 ............................. CCTGGTGAAGCCTGTGCCGTGGCGGCCGCAGC 22105 29 96.6 32 ............................T GGGGGACGTGAAGTCGGTCTCTGAAATCACGC 22166 29 100.0 32 ............................. ACGACGCGGGACTCGCCGGACGTGCTGAGCGC 22227 29 100.0 32 ............................. CTGGTACCTCCCCGAGGACGCCGTGGAGAACG 22288 29 96.6 32 ............................G GCATACCTCATCGAGGGCGCCCGGGAGGGCGA 22349 29 96.6 32 ............................T CATGGCACCCAGCTCAGGGGGCTCGGTGCCAT 22410 29 100.0 32 ............................. TCCTGCTGCTCCTCGGTGAGCCGGTCCATGTA 22471 29 100.0 32 ............................. TCCTAACGCCCCGGCCACCTCATCTCGTGTTC 22532 29 100.0 32 ............................. ACCGGCTCCGGCCGGCCCGTGCCGTTGTACGC 22593 29 100.0 32 ............................. TGACGGTCTGTGTCGTCCATCTTGCCCACCTT 22654 29 100.0 31 ............................. ATCCCGTACCTGGCCAGGGCGGTGTCACGAC 22714 29 96.6 32 ............................G TCCACCCCTACCTTCGGTAGGGACCACCACCC 22775 28 96.6 19 ........-.................... TACGTGGCCGGCACCTCGG Deletion [22822] 22822 29 100.0 32 ............................. CGGCAGCAGTGGGCCGAAACCCAGTACGGCAT 22883 29 96.6 32 ..............T.............. TTGTCGCGGCCGGGGAATGCCGGCGCGCTCGG 22944 29 96.6 32 ............................G GCGCAGCTGCAGCCCGAGGACGTCACGGACCC 23005 29 93.1 32 ..............T.............G ATGAGCGAGGCCGACGCCCGCCAGGCCGTCGC 23066 29 89.7 32 .G............T.............T GCGCGTATCCGTGATCGGCTGTGGCCACCTCG 23127 29 93.1 32 .........A............G...... CACTACCAGATCAAGGGGCGGTGATGGCTGCC GG [23144] 23190 27 82.8 32 ...-..........T..-......A...A GCCGGCCCCTGCCGTTCGGCCTGGACGACGAG 23249 29 86.2 32 ...........T.....C...T.....T. TTCGACTCCGTGCCGTTCCAGACGAGGCTGAC 23310 28 79.3 32 .......T...G.....-AC..C...... AAGGGCGCCGCCGACGCCTACCCCGTGCTGTG 23370 29 96.6 0 ..T.......................... | ========== ====== ====== ====== ============================= ================================ ================== 29 29 96.2 32 GTCGTCCCCGCACCCGCGGGGGTTGCTCC # Left flank : CTCCCAGACGAGGACCTCGGCGCCCTCTGGGACGACGGCAACAACGTCGTCAGCGGCGGCCGCAACTGGAGCGCCACACACCACCTCGACATCATCCCTGAACTCACCGACCCCACCCCCGCGGAGCCGGCCCCGTGAGCGCCGGGACGACTGTCGTCGTGCTCATCGCGGCTCCTCCCGGGCTCAGGGGACACCTCACCCGCTGGTTCGTCGAAATAGCCGCCGGCGTCTTCGTCGGCAACCCCAACGCTCGCATCCGCGACCGCCTCTGGACCGTCCTCGCCGAACGCATCCACGACGGCCAAGCCGTCATGATCGAACCGGCGACCACAGAACAGGGCTGGTCCGCCCGCACCGCAGGCCGCGACCGCTGGACCCCCGTCGACTTCGACGGCCTGACCCTCATAGCCCGTCAGCGCCAGAACGGACAACCTTGGCGTGCTGCGAGCGAGGTAAAGGAAAACGGCATGATCACCTGACAACACCGCAGGTCGTAAAGT # Right flank : CGTGCTGATCGGCCCACTGCCCCAGGTTGTGCATCCGCGCCGACGTTGGCGGGGGGTTGCTCCTCCTTCCATGCGGGTGCAGCTGACGGAGTGGGTGGTGTTGCATTTGCATCTCTGGCGCGCTCGTTACGTCTGCTTCCGTCGTAATCAGTTCCGAATGACGTCCATCGGTTGCTGGTAGGCAACGCACCTGCACGTGACAGGTGGCCTCGAAGCTCAGTGCTCGCCCTACCTCCTGCTCTGCCCATTGGATTGCTTCGGTTGCAGGTGTACGACGGCGGCCTGCTGGTGCTGTACGGTCCGCTTCGCCTGTTCCTGCTGCACGGTGCGGCGTCCCGTTGTCTCCCTGGCGTGCAGGTCCGGGAGCTTCTCGGCGATCGTGGTGCGCAGGGCCTTCTCGGCGCGAGCGTTGGCGACTTGGGCACGGTGGCTAGCGGCGAGCTTTCGCAACTCCCCGGCCTGGCGGGTGGCGCGACTGACGTCGTCGCGGTCGCTTTTGT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 579773-578585 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWB01000004.1 Streptomyces coelicoflavus strain NBRC 15399, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 579772 29 96.6 32 ............................G TGGTCGGCGAGTTTGGTGAGGGCGGCGACGAG 579711 29 100.0 32 ............................. GTGAGCACCGCGAGCGGTACCACCGGGCGACG 579650 29 100.0 32 ............................. GGACGTCGTGCCAACGCAACGCCAAGGAGGCA 579589 29 96.6 32 ............................G AGCGCGCTGGGCGACTCGGCTGCCCAGATGGG 579528 29 100.0 32 ............................. GGTCTCCTGCGAGCACCCGGCGAGGGTGGCCA 579467 29 100.0 32 ............................. CGGTCGTCCTTCTTCAGCAGGCCGTAGAAGGC 579406 29 100.0 32 ............................. TGGGAGCACCGCGCCCGGACCGCGATCACGAT 579345 29 100.0 32 ............................. TCGCGTGGGTCGTCGCCGACCGGGCACTCACC 579284 29 100.0 32 ............................. GCGGCCGCGTCGCTGGAGGAACTGCGGCCCTG 579223 29 96.6 32 ........T.................... TCCGCGTGCCCGTCCTGCCCGAGGTGCCACCC 579162 29 100.0 32 ............................. TGGGACTGGCCAAGATGGCTGGCGTGGTCGTC 579101 29 100.0 32 ............................. TTCCAGAGGGGCTTCTACTGCCCGGAGGCGGA 579040 29 100.0 32 ............................. GGGTTGCCGTTCGCGTTGACGAGCGTGCCGGG 578979 29 100.0 32 ............................. ATCGGTGAGTCCGCGCTCAAGCGGGACCTCGT 578918 29 100.0 32 ............................. GGCATGTCGAAGGGGTCGCTGGTCCACAGCCG 578857 29 100.0 32 ............................. TTCGGCTTCACCGTGGTGGTGTCCGAGTCGGA 578796 29 96.6 32 T............................ CCTGGCGGTGGCTGGGTACGGCGACGGCGAGC 578735 29 100.0 32 ............................. TCACCTGGGGCTCCTTCAACGTCTTCGCGTAC 578674 29 96.6 32 ............T................ GAACAGCCGGACTGGAACTTTTGGTGCTTCGT 578613 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.2 32 CTGCTCCCCGCACCCGCGGGGATGGCCCC # Left flank : CGGCACCAACTACGACGGCCCCGAGGACTACGGGGACGAGCTCTGGTGACCGTCATCGTCCTTACCAACTGCCCGGCCGGCCTGCGCGGTTTCCTCACACGCTGGCTGATGGAGATCTCCGCCGGGGTATTCGTCGGCAACCCCTCCGCCCGCATCCGCGACGCACTCTGGGAAGAAGTCCAGCAGTACGCGGGCCAGGGCCGCGCCCTGCTGGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCACCCGACCGACCACGAAGGCATCACCCTGATCCGCCGGCCCGACCTCAACGCCCCTTCCCGTGGACCGGCTCCTCAGAACGGGCCACCATCCGGCTGGAGCAGAGCCGCCAAACGCCGACGCTTCGGCAGAGGCTGATGCATATTGAGTAACTTACGGCTGATTTGCCGGGACCAATGAAGATGCTCGAGAACCGCCTCCAGCGTCTATAAAGGTGCAGGTCATCCAGT # Right flank : GAGCGTCCGCAGCACCAGCCAGTGGTCCCGAGGCACACGCGGAACGCACCACCCGGCACCCGGGCCTCCGGGGCGCTACGCCACCGACCCGATGCGCCCCGTCGGCACCGCCGGGCCGTCGTGGTGGATGGGGGTGTGGGCGCCGGTCAGGGCGGCGCCCGTGCCGCCGTGGCGGGCCGCGACGATCTCGGCCGCGATGGACAGGGCCGTCTCCTCGGGGGTGCGGGCGCCGAGGTCGAGGCCGATGGGCGACCTGAGGCGGGCCAGCTCCAGGTCGCTCACGCCGGCCTCGCGCAGCCGGGCCTCGCGGTCCAGGTGGGTGCGGCGGGAGCCCATCGCGCCGACGTAGGCCACCGGGAGGCGCAGCGCCAGCCGGAGCAGCGGGATGTCGAACTTGGCGTCGTGGGTCAGGACGCACAGCACGGTGCGCGCGTCGACCTCGGTGCGCGCCAGGTACTCGTGGGGCCACTCGGCGACGACCTCGTCCGCGTCCGGGAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 589538-591518 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWB01000004.1 Streptomyces coelicoflavus strain NBRC 15399, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 589538 29 100.0 32 ............................. CGGTACGCGCCGTGGCGGTCCACTGCGGTGGG 589599 29 100.0 32 ............................. TGCACTAGGGCGTCCATCGGTTCTCACCTCGT 589660 29 100.0 32 ............................. GTCAGCGAACTGCAGAAGGTCGCAGCCAAGGC 589721 29 100.0 32 ............................. ACCCGCACCGCCCTGCATCTGATCGGCCACGC 589782 29 96.6 32 ............................T CGATCTGGGCCGTGATCCTCGCCTTCTTCTTC 589843 29 100.0 32 ............................. ATTTCACCCTGGTAGTTCGGTGTGGCGATCTC 589904 29 100.0 32 ............................. ATGAGCGGAAGGCTGTCGGGGAGCGCGTACTC 589965 29 100.0 32 ............................. ACCAGCTACGTGTGCAGCGCCATCGACTACAC 590026 29 100.0 32 ............................. GTCCCCACCGGGGAGAGACGGGTGTCCTCGCG 590087 29 100.0 32 ............................. CGCATGCTGACCGTGCCCAGACGACACTGCCT 590148 29 100.0 32 ............................. GTCTCCCGGATGTAGGCCAGCTGGTCGGCGTG 590209 29 100.0 32 ............................. GGGGCGGGCCAGAGACCCGCGCTATCGAGTCT 590270 29 100.0 32 ............................. GAGGAGATCGACGGGATCATGTCCGGCCTGGT 590331 29 100.0 32 ............................. CTGCGCAACGTCTCCAACGCGCTGAAGGCGGA 590392 29 100.0 32 ............................. ACCAAGACCTCACCGTCACCGACGTCACCGAC 590453 29 96.6 32 ..............A.............. CTCGGCAACGGCCGCGACGAGTACCCGGCCGT 590514 29 100.0 32 ............................. GGCCACCGCTGCTCGGGCGGGATGTTTTTGCC 590575 29 100.0 32 ............................. CACCTGCGTCACGACCACCTCGCCCGCGGTCA 590636 29 100.0 32 ............................. GCCCATGTCAGCGTGCAGCCGGTAGCGGTCCA 590697 29 100.0 32 ............................. TTCGTCGTGACCGGAGCGGTCACACCTCAGGC 590758 29 100.0 32 ............................. CCCGCGCGCCAACCGCGCCGGGGCGGCTAACT 590819 29 100.0 32 ............................. CACGACGACCTGAACTGGCGCGAGATCGCCCA 590880 29 100.0 32 ............................. GACGGGTCGATCGGTGTGGACTCCCGCACCAC 590941 29 100.0 32 ............................. GCGTCGAGCTGGGCGGCGGGCGCCTGCTCGAT 591002 29 100.0 32 ............................. CCCGCGCGCCAACCGCGCCGGGGCGGCTAACT 591063 29 100.0 32 ............................. TCGGCGGATCGGTGGTCCGGATCGGCGACGGC 591124 29 100.0 32 ............................. CGCGTCCCTGCCACGCCCACCGGGTTGGCCCG 591185 29 100.0 32 ............................. CGCGCGCCAAGATGCCCGGCTAGGCGGAAGTA 591246 29 100.0 32 ............................. AGGGGGAAGTCGATGCGGCGCTGTGCGGCGAG 591307 29 93.1 32 ..........T.T................ TGCCTCATGGACCCGCGCACCGGAGCGCTCCC 591368 29 100.0 32 ............................. GTCACGGACCAGGACCGGCGGTTGATGTTGAT 591429 29 100.0 32 ............................. AACGCGAGGCCGAACGGCAGCACGGCGAACGC 591490 29 93.1 0 ...........G......A.......... | ========== ====== ====== ====== ============================= ================================ ================== 33 29 99.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGACACGCGAACGCCGGCGTGGCCTTGCCGATGTCGTGCACGCCAGCGAGCCACACGGCGAGGGCACGCGCGTCCGACTCCCCCCGAGGCAACGCCTCAGCTATCAGCCGCCGCACTCCCACAGGCAGCCACCGGTCCCACAACAGCCCCGCCACTGCGGCGCTGTCCTCCATGTGCCGCCACAGCGGAAGCCACCCATCGGTGGTTCGATCATGCTTGGCCCACACCACCCTGGCCGGCTCCCCAAGCCGACGCAACAGGCTGGAACGGGCGTTCCCCCCATCACTCATGAGTGATTCATACAGGGAAAATCCGACTCACCCCACCAGAACCAGGAAAGAGGAGAATTCATTGAGAGACGGCACTTCCTAGTCATAGGGTGATCGGCTAACCATGGCCACGCGTAAGGAACCACTTGTTGCCTCATGTCTTGTTTGCCGGAATCTTTGAAGGTTGCTGAAAACACGCCTCCGCGGCCGTAAACTCGCAGGTCAAAAAGT # Right flank : CTCGCCGAACAGTGCCGTCGCATGGTCGGCTACCTGCTCTCCGCAAGACGCGGGGACTTCCACGTATGAAGGTTCGTCGGGCGGTGTCCCCGTTCATACAGGTGGGGACGCCGTCGGGGTCGGCTCAGTAGGTGAGCGTGACCCGGCTCTCCGGCTTGCTGATCATGTGGCCCGGCGCGGCTTGGGTTGCGGAGGGAGTGATGGTCATCTGCGGTACGGCCAGGCGGGCGACGCCCCACGTGTCGATGTGGGCGATGAGATCGTGGGCCAGCTCCTCGCCGCGTGGCCCGTACGCCGCCGCACCGAGCCGGAATTGGCGCTCCGGGTCGACGTCTTCACGGGTTACGGTCAGGTAGGCCAGCGAGTCGTCTTCGACCAGGACAGGGCTGCGGCCTGGTGTGGCAGGCCTGCGGACAAGGTCCTGCTCCATGGCCTCCTGGGTGACTTCGAGTCGGCACACGCGGTTGTCGTCGGCTGTGGCACGCAGCCACACGCCGTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 602183-602333 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWB01000004.1 Streptomyces coelicoflavus strain NBRC 15399, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 602183 29 100.0 32 ............................. GGTTCGTGGGAGTTGCCGCGTCCGTCGAAGGC 602244 29 100.0 32 ............................. TGCGCGCCCTTGACCGGCGAACACGAGACACG 602305 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTTGCCCAAAAACCACGTTCCGCCCATGACGAGAATCCTCATGCACTGATCCTGCCCTGCCTGAGACCCGGGCGACAGGGCGGGCTACGCCGCCGGCAGGCGCCGCGAGTGCAGGGGCTCGGTGATCCCTTGGAACATGCTGGACACCGAGCCGAGTCCTGCACGCCAGTTGGGCCGCCGAGATCACCAGGTATGAGCTCGAGCTGACGTGCGAGCACTCCCGGCTCGGACGGACGGCCACGGCCGCCCGGCGTCGTCGAGCGCCCACCGGGCTGCTGTCCTGCTGCCGGAGGAGGACCTCAAGCTGCGCAAGTGGGTGGTCAAACAGCTTGGTCTGCTTCCGGAATCTGTGCGGGAGGGGCGGTGGCAGCCAGCACGGCGCTCGGCCAGCCCCGAGGTCCCTCCCTGTGGATCGGCACCACCCCATGTCGCATTTGCCGGAATCTGTGAAAGTCGCTGAGAATAAGCCCCTGCGCCCATAAACTTGCAGGTCAATCAGT # Right flank : CCGCTTTTGGTTGTCGGCTCCCGTACGTCACCCGGCCGGGGACTCCGAAGAGCCGGCCTCAGCCCCGGCCGGGCGCCTTCCTGGCCAGCGACACCTCCGCGACCACCGGCCGGTGGTCCGAGGCCGTGGGCTCCTCCGGCACCGCGACGTCGTGCACCCGTACGCCCTCGCCCACGGCCACGTAGTCGATCCGCTTCACCGGTGCCTCGGCGGGATACGTGTCCGGGGTCCCGGTGCCCGCGTCCCGCAGCTCCTTCCACAGCGGTGCCAGCTCGGGGGCCGAGGGCTCGGCGTTGAAGTCGCCGAGCAGGAACTGGCGGGCACCCGGAAGCTCCGCCCGCTCGCGGGCCATGATGCGCCGGGTGTCGGCGACCTGGGCCTCGCGCACCGCCGGGTCCGCCCGGTAGTCGAGGTGGGTCACGAACACCTGCACCGGCACGCCGCGCACCTTGAGCGTCACCTCGCCGAACCCGGGCGCGGGGGCCGGCACCGGGTTCTCG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //