Array 1 297947-298724 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVEM010000006.1 Paenibacillus sp. BJ-4 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 297947 32 100.0 34 ................................ TCAAAGTCAAAGTATTCGGCTCTAGCATCTCCTG 298013 32 100.0 37 ................................ TGCTAGGCATGCTACAAAAATCCCCTATCAACGCGCC 298082 32 100.0 35 ................................ ATACAACGCTGTTACGAATTTTGTGGATGCCGTCA 298149 32 100.0 37 ................................ CAATAATGAAAGGAGGTTTCCTAGCGTATGGAGCCAG 298218 32 100.0 34 ................................ ATGTAGTTATGGGTGGAAACGTTTGGATAGCTTA 298284 32 100.0 36 ................................ ATAGAATCACATCCTCAATAGGGTTTAAATGGTGGG 298352 32 100.0 35 ................................ AAAAAGTTTTGAGAAAAAATACCATATCCCTTCGA 298419 32 100.0 36 ................................ TTGATGACAAGCCGAAGAATAAAGCCAGCAAATAAC 298487 32 100.0 37 ................................ TCGTTATTATTATATTCAACAAACAAAAGGCTCTGTG 298556 32 100.0 36 ................................ TCCTTATACGGCATCGGCTCCCGTGGCTTGTTGCCC 298624 32 100.0 37 ................................ CTGTAGATACGCATCATCTGCGGATCGATCTCAACAT 298693 32 93.8 0 ........................G..A.... | ========== ====== ====== ====== ================================ ===================================== ================== 12 32 99.5 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : ACGGAGAAATCGGAAAGGTTAAAGCAGATTACCATCCCTGTTCAGTTTCCCGAAGGAGGGCAGCCGTTGGCTAATGGGCCGGGTCAACCCGAGCAGGTAGCTGATTTAGTCACCTTTTTGGCCTCCGATCATTCGCGTCATATCACTGGCGCACAAATTGTGATTGATGGGGCGGAATCCTTATTGTTTTAGCGCTGAGCAGATTTTTAGTCATAGAGAAATGATGAACGTTGTTTGAGTGTATGGTCTTGGTTATGATGCTTATTTATGGTATATGTATAAAGGAAGATAAAGCAAATTTTCTCTCTCTCTATTGTTTGGTGCGAATGTGAAGCTCACATAAAATCCCTAGATCCTTCGCACCTCGAAATTTGTCGAAAAGGATTCAAATCAGCTTTCATCGATAAAAGTCAATCCTAGATTCAAGCTTTTTTGGTATCGTTTTTATGAAAATGTACAGAATTGATATCTTTTCTGGATCAATTGGGTACATTTTCGCT # Right flank : TCGGGGCGCGGGTTGCATGTAACTGGCAATCCATGCCCACTCCACATGAAGATGTATTTTAAAACTCATTTTGTAAGTGTAATTCGAACTTAAAATATTTAATTTTGGTGTATGTCAAGAATCCTCAGAGAAAGAGCTCTGGGGATTTTTTTATGAGTGCTTGATTCGCTCAAAATACTGAATTTTTCTCTAAAATAATTTGTTTGGGAGGAAAATGTAAATCAATGTCGAAAAAAGTAAATAAGTCTTAGTTCAAGAGACTCATTCAGCAGAAGTATAGGCTCATATAGGCCGAAATTAAAGGAGTGAAAAAATGGAGTATATCGCCCACATACGGGAAAGTGACCAAGTGATTCAGACGGTTGCTGAACATCTATTGGAAACTCGACAATTAGCAGAGGCCTTTGGCGATAAAATAGGCATACGACATATTACCGGACTCGCTGGTATGCTGCATGACTTGGGGAAATACACAGAAAAATTCCAGCATTACATACGTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 307416-308178 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVEM010000006.1 Paenibacillus sp. BJ-4 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 307416 32 100.0 34 ................................ TACTTAATTGAATTGATCTGCTCGAAAAGAGAGC 307482 32 100.0 33 ................................ TTACTCAAGATGAAAAACAACTCCTTTTATGGT 307547 32 100.0 35 ................................ AATTTCATCAGGACGAGGCAATGATGTAATTGAAC 307614 32 100.0 36 ................................ CATATTCCTGCTCAAGTTTGGCTCTAATCTGTTCTT 307682 32 100.0 37 ................................ AGTGGAGATTTGCCGTCCAGAAGCCGAAGTTCCTAAA 307751 32 100.0 33 ................................ CCGAATTGACGTTGCAGTTTAGAGAGGGGGTAA 307816 32 100.0 33 ................................ AATGGAACGCATCTTCATTACAGTAAACGTTTA 307881 32 93.8 34 .........T..A................... GCCCGTGGTTGCCTGCGAACGGGCCCGATCAATT 307947 32 93.8 36 .........T..A................... TTTTCTCAAAAAAATAATCCATGCTAACGTTTAAAA 308015 32 93.8 35 .........T..A................... TCTTGCTGGACTGATGAAATGTAGTCGTTGTGAAA 308082 32 93.8 33 .........T..A................... TTGCCTTTGTATGTGCTGATAACTTCGTTAATA 308147 32 93.8 0 .........T..A................... | ========== ====== ====== ====== ================================ ===================================== ================== 12 32 97.4 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : CCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATATTGATTACTTATGATGTAAGTACAGTAGACAGAGTAGGCAGAAAGAGATTGGCAAAGGTTGCGAAAAAGTGTGTTGATCACGGACAAAGGGTACAAAACTCCGTATTTGAATGTATTTTGGATTCGGCCCAGTTCCGCCGTTTAAAATATGAATTAGAAGAGTTGATAGACAAAAAGGAAGACAGCCTGCGTTTCTACAACTTAGGTGATAACTACAAAAAGAAAGTAGAGCATATAGGGGCCAAAGAGGCTTACGATATGGAGAGTCCACTTATTTTATAAGGTGCGAATGTGAAGATCACATAAAAACCCCGGGTCCTTCGCACCTCGAAAATTGTCGAAAATCAATTGAATCAATTACCTTTAGTAAAAGTCAATGGTTGATTCAAGCTTTTTTGGCATCAGTTTTTGCGACAATGTGTGGAATTGATATCATAAGGGTATGAATTACTGCATTTTCGCT # Right flank : TCTTCGCACTACCAGGCCCATAATACGTACTTACTGGATTGTCAACAGTAAACCAGACAGCTTTTTTAAGGGCTTCTTTGCGATACTGAATAGGCGTCAGATATCCCAGCGTTCCGTGACTCCGATGTTTGTTAAACCAGTTGATGTAATCATATAGTTCCAATTCCAGATGATGAGAACTGTGGAAATCCATCTGATTAATGAACTCTGTTTTCATGATTTTATAGGTGGCTTCAGCCACGGCATTGTCGTAGGGACAGCCCTTCATGCTAAGCGAGCGACGGATTTCAAAGGTTTCCAAAAGCTCGTTCATCTTTACGTTTTTAAACTCACTGCCACGGTCTGTATGAAACCACTGAATGTGACGCAGATCCCCCTGTACGGTAGCAAAGGCGCGGGAAATCAGAGCAGCGTCCTTATTTGGAGCTGCACTATAACCAATGATTTCTCGATTGAATAAGTCGATCAGCACGCAAATGTAATGCCACCGATTCTGAACC # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 309431-309663 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVEM010000006.1 Paenibacillus sp. BJ-4 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 309431 32 100.0 33 ................................ GTTAGAGCTTTGATCTTCATACCATGTGGCGTA 309496 32 100.0 38 ................................ GGTTGTTACTCGGTATCCGGTCATAGTGTCATAACCCT 309566 32 93.8 34 .........C..G................... AGAGTGAGTAGTGTCAACTGCCCTGTTACTTGCA 309632 32 96.9 0 .............C.................. | ========== ====== ====== ====== ================================ ====================================== ================== 4 32 97.7 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TCTCCTTAATAGCTTCAGTGATCTCATCCTCATTCGATGGTTCTTGCCCTTCATAGTAAAAGGTGCTTCTTGCGACTTGCAGGACGTCACACATTGCTGATACCGAGTATTTATCACGGTTATTCTGGATGATAGCTACTTTCGTCCCATGATCAGCGCGGCTTGCTTTAAAATATCTACCTCCATTTTCAGCCGCTGGTTCTCTTTTCGTAAGGCGATGAGCTCATTGTCTTCGGAGGAGCGATTGTCCTTTTCTTTGAAGGAGCCCGTTGTCTGAGTTTGCTTGATCCAGCGGTCTAAAGCAGAAGCCGTGAGGCCATATTCCTCCACAATCGCTGCTCTGGGTTTCCCGTTTTCATAGAGCTGGACCATTTGCTTTTTGAATTCTGCTGTAAACGTACGTCGTTGTTGTTTTGGCATTGTAGAGTTCCGCTCCTTCACTTGATAGGTTTATTCTACAAGCCCTTATTTTTTCTGTCCAACTAAGTGTAGCCGATCCA # Right flank : TCGGCAGGTGGGGGGGCGGCGCAGCTGGAGGCTCGGCTTTGTTGCTCTCTATTTAACAGCTGTGTTCATAAAATTAAGAAAAGGTATATTTATAATACCTTCGTATCCTGAAATGGTATAATTAGCCAAGGGGATTCTCATTCATCAGGAGGGGCTATGGAATCAGAAGACATTCGCCGGCAATTACTAAGTCATATTCAGAGTTACAAGAAATCTACCATTCTACTTGAAGAGTTGGCAGCTTTTATGAGTGGACATGACGTTAATTATCCATCATTTGCTGAGACCATTTTACAACTCGAGGAAATGCAGATATTAGTGGGGGTCAAAGCGCATGGCAGGAACGGGAAACGGCCCGCATTGGCTTACCAATATAAAATTCGTCGAGTGTTCATGCGGCAGGGGCATTTACAAAGAATTCAACAGCACTCTGCTCAATTTCATCCAAGTATAAATCTGGATTGGTATTATGGGCAGTCTGAAGACACATGGAACAAGGA # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 317911-318273 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVEM010000006.1 Paenibacillus sp. BJ-4 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 317911 32 100.0 33 ................................ GCTGAGTGTGACGATAAGATCAGTCGTGGCAAG 317976 32 100.0 34 ................................ TTGTGGATTTAGAAAAGGATATGGGGTTCACGGG 318042 32 100.0 35 ................................ TACACGGGTAGCTGGAGTACCAATACCTTTTTCCT 318109 32 100.0 35 ................................ AGCCCTGAGTATCAGATTTTACGGATTACCTTCAT 318176 32 100.0 34 ................................ AGACTTTGATTAAGGTGTATGAGAATTTATTGAA 318242 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 6 32 100.0 34 GTCGCACTCCACGTGAGTGCGTGGATTGAAAT # Left flank : TTGCTGGTGAGCCCGGTAAGCAAATTATTGATCCCCACCAAAAGATGGATCAGGCTTATTTCCGCGATTTTGCTCCTGAATCCAAGGTGTATATAGGTGAAGTGAAGCAATTGGAGCTTTTTGAATAAGCATGTTGGAGACTAATATTCGCTCGTCATTGGCACGGAGGGGGCTCCGTGCTTGAGGCTGATCTGGCTCTGACCGAATATATGGTGTGTCTTATCTTCCAAGAACCGCCCTGAACTGGTGTCGATTCGTATTATGCACATCGACCTATTCCGTTTCTTTCAGCGTCAGGCAGATCAACCGAATCGTAAAGGTGCGAATATAAAGCTCCCATGAATTCCCCGAGTCCTTCGCACCTCGAAATTTGTCGAAAGGTATTGGGATCACTACTTATCCATAAAAGTCAATAGTTGATCCAAGCTTATTGGGCATCATTTTTTGCATCAATGTGGAGAATTGATATCATTAGGATTATCAAATACTACATTTTTGCT # Right flank : TAATCTAGAGGCCAACTACGTAAGGATTAGATAAGTGGCTGGATTCCAAGTAGCTGCTGCAGAAAGTGCTGAGGCATAAAAACGATCTATATTGGTTTGCCAAGGTTACGAACAATCAACAGATTACAATGCCATGTTCTCCTAGGAGACGTGAACTCTTGGTCTGGTGGAGAGCGATGGAGCAAGAACATGACTCTTTTTTTTGGCATGTGAATTATGTAGCCGAGCGTAAACAGCATATCCAGCGACAGATGAAGCGACACCGGGGGTTGCCATCCTTGATAATCCATTCGGCAAGGCATCCAGTGACCATGTTCCTAGTCCAGTATTTTATATTGCGGAGCAGTTAGGGTTTCAGATTATTGCTCTGAAATCGCATATAAATGGCAAATTTATACAAGAATGTAATTATCACCAAAAGATGGATTATCAGGTCTATTTTCGCGATTTTGCTCCTGAATTTCACCAAAAAAACAAAGCCTCCCTGATAATCTCTTATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCACGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 326821-327650 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVEM010000006.1 Paenibacillus sp. BJ-4 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 326821 32 100.0 34 ................................ CTGCCTAATCCGTTTACAAAATAGATAAAACCAA 326887 32 100.0 34 ................................ TTCATCGGGCACTCCTGATACTGGTAGTTCAACA 326953 32 100.0 34 ................................ CGTCCTGATGCTTTACTAAACCGTGAGCAGGCTT 327019 32 100.0 36 ................................ CAATACCTGTGGCAGACGCGACCTATCAATCGCAGC 327087 32 100.0 35 ................................ AATAAGCTGCTTGATTTTTTGTCCTATCCGCTTGG 327154 32 100.0 35 ................................ TGCCATACCTGCAGGCTTTTTAGCAGACCCAGCCC 327221 32 100.0 33 ................................ TAAACTGCTTTGAGTAACGAAAGGAGTCTCACA 327286 32 100.0 34 ................................ CCCTACTCGTCCTCGTGCTTGCTGCACTTGCTGC 327352 32 100.0 35 ................................ GACCAGTCGTAAATGGTAGAAGGGCGGTAGAGAAA 327419 32 100.0 35 ................................ AAGCCAAGCGATACAGCAAAAACATAGGTATAGAA 327486 32 96.9 36 ........................G....... TACGAAGACGGCCATCCTAAAAGTTGCGTAATCACA 327554 32 100.0 33 ................................ TCGTCTATCATATCCACTGGCATATCTATCATC 327619 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 99.8 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CAGTTTGCACAGCGCTCAAACAGGATGTGCTTACACCGCATCACCAGGATTATAACGGCATTATTGTAGAGCCTTATCATAAGGACATTGAATACGAGGCTCCACGTGACGATGATTCTCCTGTCCCTATTTCATTTCTTTCAGCGTCGGCTCATTTCCGCATCATATTAACCTGTGAGGGAGAGCAGGAACAAGCTATGAAATGGCTAAGCTTGGCAAAAGCAATCCTGCTCGGAGCGCTAAGAGATGAAGGCATTGGTGGGAAGACCAACGCAGGATATGGAAGGTTGTTAGAGGTTTAATTGAACAGTGAAGTGAAGGTGCGAATGTAAAGCTCCCATGAATTCCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAGGTATTGGGATCACTACTTATCCATAAAAGTCAATAGTTGATCCAAGTTTATTGGGCATCATTTTTTGCATCAATGTGGAGAATTGATATCATTAGGGTATTAATTACTTCATTTTCGCG # Right flank : TTTGATGCTATGTATTCGGAAATGTCCTTATACACAGTCACACTCTATATGAGTTCAAATTTGTCCAGCATGCGGAAGATTTGAAGGCCTTCAAGTCGCACTCCAGTTGACAAATTGACGATGCGGCAGGATTCACGGTTGGTCGTTACGGCATATGGTTTTGCTCGGCTGGTTAGGCGGTAGAATGAGGCTAGGAGATGAGGCCGTACAGAGGATAAAATGCGGAAGAACCACCGAAGGATGAAAAATCCAGTACGGTGGTTCTTTTTTTTCACTCGTCTTGTATGCCATCATTATAGGGGGAGGCGATGAAGGATGTTCCAGGATTTCAAGCTCGTCAGTGACCGTCCGGTCTCGATACAAGTAAAAGAATACGTCAATCGTTTAATTATAAAAGGGGCGCTTCAGGCGGATCAGAAGCTGCCCTCCACACGAGAAATGAGCGTTCTGCTTAAGGTGAGCCGCAATACAGTCATTGCAGCCTATGAAGGCTTGGAGGA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 332176-333856 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVEM010000006.1 Paenibacillus sp. BJ-4 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================================================================================================================================================================================ ================== 332176 32 93.8 36 .........T..A................... CGGCACGGACACCAGCTCCGCACTCCAGGTTGCTCC 332244 32 93.8 35 .........T..A................... ATACGAAGGGCAGCGTTTTGAATCAGACTATCTTT 332311 32 93.8 33 .........T..A................... AATTAATTAAGACATTTCCAGAAGCCCTGACTA 332376 32 93.8 34 .........T..A................... GATTTGCTTAAAAGGGCCATCCAAAGGAATCGGA 332442 32 93.8 36 .........T..A................... CACCAAACCGTATCAATAATCATCATTGTCTTTCAC 332510 32 93.8 36 .........T..A................... CATTAAGTTCATCATCTTTGCCAAAATAATTTTCGC 332578 32 93.8 34 .........T..A................... GAAGACTCTAAGCATCGCACTGTTAATGACAAAA 332644 32 90.6 35 ....T....T..A................... TGGAGGCTCTTGCACCCCTTAAAGGGTTCACTAGA 332711 32 87.5 36 ....G....T..A.....A............. TTTTGGCAATCACAAGTCACATTTGATAATCGGCCT 332779 32 81.2 204 ....T....TG.A......T........G... GGAAAGCTTACTTATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAACCCCAGGTTCTTCGCACCTCGAAAAATGTCGAAAAATATTAAATTTGCTATTTATCCGTAAAAGTCAATAGCTGATCCAAGCTTATTTGGAATCATTTTTTGCGATAATGTTGTGGGATTGATATCATTAGGGTATGAATTGCTGCATTTTCGCT G [332793] 333016 32 100.0 35 ................................ TTGAGCGGGCATAACTATATAACGATCCAGATACA 333083 32 100.0 37 ................................ ACGTCTTTACCTTCCGGTACACTTGCGGAGCTGCGGA 333152 32 100.0 34 ................................ ATTGTGAAGCAGGGTATTTCGTGGGGCGTGAGGC 333218 32 100.0 34 ................................ TCACGATTAAGTATTCAAAACATAGTAGTCTAAA 333284 32 100.0 36 ................................ ACTGCGTAGATCAAAATATTGCTTTTCGTCGTTTTG 333352 32 100.0 37 ................................ ATTAAAGGAGTGACTCCCGGTGAAGAGCATCCAGGTG 333421 32 100.0 38 ................................ ATTAAGTCTAAAGAAGAATTGTATGGGAAGACACAGCC 333491 32 100.0 37 ................................ TTTAGTAGAACTATCTTTTAACAAAACCATTTGCAAC 333560 32 100.0 33 ................................ AGCACATACTCCCCGTGATATGTGGAAATTTGC 333625 32 100.0 36 ................................ ATCTGATGTACCTATAAATTCGCCATTGATATAGTA 333693 32 96.9 34 ...........................A.... CGACAGGATGGTGCAACGAATGAAGAACGGAAAG 333759 32 100.0 34 ................................ TCATTCCCGCAATACCAAACTCCCTTAAAGGTGA 333825 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ============================================================================================================================================================================================================ ================== 23 32 96.1 43 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : TATGATGAACAGGGTTAATAACTCAAATTTTGCCGAACGTCTTCATAAAATATTTTACAGATACCTTTATGATTTTCGAAAACATAAGTATTTTTCTCATTAATGTAGTGGATATTTCCGAATGTATATACATCCAAAGCCGGAACGTTCAGCTTAGGTGTTAACTGGTGGGACCCTACTTTTAAATGCGCTATCGATGAATTAAATATATTCGAATGTGCGCTGTCTCTTCACAGGTGGTAGAACTGGCAGAGTTGAAATAAGTTCAGGCAGGTATTTGCTGCTATGGCAAAGTAATTTTTTGAAAGCGATCTGTTCAGGTGCGAATGTGAAGCTCACATGAATTCCCCGGGGGATTCGCACCTCAGATTTTGTCGATAGCGTGTCGAATGTGAACAAGTTGTAAATGATCGTAAGGGGATGAGGTAATAATAGATGCGTTTTTGCTGAAATAACGCTAGAATATTACTTAAATAGGGGAGATTAGACCCATTTTCGCT # Right flank : TTGACTATCAGATCCCGTAGACTTACCGTCCATAGGGTTATTTTACGCTTTGTGATATAAGATGAGTGCTATGGGTATCTATGCAATTTTGATAGGAATTGTGACTGGAGAAATAATCAACTTCGTATTATCAAAGCGAGAGAAATGAACTTATGCATCCCTTGATTGATCAAAATCAGGGGATTTTTCATTAAATTAAAAAAGTCATAGAATTTCTACCTGCAACCTCTACATCATTTACTGGTGGTAATGTATATGGGAAAATGAAATAGTCATGTCAACATTGTGAAATCTTTTATTTAGGCAATCCAATTCTACTTTTGCTACTCGTTTCACAATCTCCCCTTATGTGTGAGTTATGCAATTTATTTATTACAAACATTAGTTGCATAATATATTGACAGATGGTTAATTTTGGAGAAGAATAAAGTATGTTTTTTACAATAATGGGATTTTTATGTGAAGGGTGGTTATGACTTGAAGCATACACCTACGATTTC # Questionable array : NO Score: 8.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:-0.73, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //