Array 1 11-757 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXV010000034.1 Deinococcus multiflagellatus strain KACC 19287 34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 11 37 100.0 34 ..................................... CACGACACCACCGAAGAGCAGATGATCAGCGACC 82 37 100.0 36 ..................................... CACGGTGTCCTTGGTGATGGCAAAGCCAGCGATCTC 155 37 100.0 32 ..................................... GTGTCCGCATCGGGCTGTCTAACCGGTGCACG 224 37 100.0 36 ..................................... CCCAGGAATGCCCCAGACTTTGGTGGTGACGTCCTT 297 37 100.0 34 ..................................... ACCCCATGCTGGCCCAGCGGATCTCGTCGCTGGC 368 37 100.0 33 ..................................... CAGAGCAGTCCCTCTGCGCCACTCCCGCCCCAG 438 37 100.0 34 ..................................... GCCGGGCCCGCCCGTCTCACCGTGAGCGTCCCCG 509 37 100.0 34 ..................................... CGCGACGTCCCAGACGCCAGATTCGGACTCGCTG 580 37 100.0 34 ..................................... ACGCCCCCGGCGCCGGTGGTAGCCGTGCAGGTGG 651 37 100.0 33 ..................................... TGCCAGATCTGCGTGTTTGGCGCGAGGCCATTG 721 37 81.1 0 .........T................C...AC.CCT. | ========== ====== ====== ====== ===================================== ==================================== ================== 11 37 98.3 34 GTTGCAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Left flank : TTATCCAGCCG # Right flank : CATTTGAACGGCACCTCTCTCAGACTCAGAACAGCCCAGCGAAGTGACAGGCATTTCCATGGGCATCCGAGGTCAGGTGGGCGCCGTTAAGGTTGCGCTGCACCTGGACCTGGTTGCCATGCTGGGGCACGGTGATCGCCAGTGGGATCTGTTCCGCTGGATCAAAGTCGAAGTTCGCCCCTGCATGCCGCTCACTCTGATACGACAGTTCCCGGAGCAACGGCCCATTCAGGAACATGATGGTGGACGCGGCCGTCTGATAGAACTCCTGCCAACGTGCCTGGGAAATGGCAATGGCCGCGTTGGCATAGGCAGGGAGGTTGGCCGGCGTGCCGATGTCCAGCACCGCCAGGCCCGCCCACAGGTTGAACGCCGTGTCTATCTGTTGCGGGGTGACCCCCGCCTGCACAAGATAATCATGGAGACTGCCTGCCCCCCGCGCATTGCAGATCAGGTTGTACGCCTCCATATCGGCGGGCCGAACGTGTTTGATCAGAAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.90,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 1 30030-28924 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXV010000015.1 Deinococcus multiflagellatus strain KACC 19287 15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 30029 37 100.0 36 ..................................... CTGTTCGTTGACCAGATGCTGGGCCGCGTTGAAGGT 29956 37 100.0 35 ..................................... AACAGGCGACAGGGGTAGACCTCGGGTTAGCTGAA 29884 37 100.0 34 ..................................... ACGATCTTGGGTAGTTCCGACAAGATTCACACGC 29813 37 100.0 34 ..................................... CTCTGACAGGTCGCAGCCGGCGTCCTGGCCGCGC 29742 37 100.0 34 ..................................... GGGTGGGTGGGCCTGCCAGTCCCACAACTCCGGC 29671 37 100.0 34 ..................................... TGAACTATTACCGTGAGGAAGCGGCGCACATCGC 29600 37 100.0 35 ..................................... AGGTGGCGGCCACCGGCCCCAATGCCCAGGCCCTG 29528 37 100.0 34 ..................................... TGGAGGAACATCAGGAACAGGCCCAGAGCCTGGA 29457 37 100.0 33 ..................................... GGGGGATAGGCAGCGCAAAGCGGCCCACAAAGA 29387 37 100.0 32 ..................................... ATCGAAGGCCTCATCCGTGGGGAAGGCGGGCA 29318 37 100.0 34 ..................................... ATCACAACGCCCTCACGGTCACCCGGCCCCTGGT 29247 37 91.9 35 ............C....T................G.. CCCAGACTCTTGTACATGGCCGCGCGCGCCGCCTG 29175 37 89.2 34 ............C....G.T..........C...... AACGCACGCGGCGCAACCGGCGCCCTGGACCTGC 29104 37 100.0 36 ..................................... ACTGCTGCGGCCCAGGTGCCCGCCAGCATCATGGGG 29031 37 94.6 34 .................G................G.. ATGCAGGGCGCATGGCGCCAGGTGCTGCTGCAAC 28960 37 75.7 0 .........CA....CGGT.A............C.G. | ========== ====== ====== ====== ===================================== ==================================== ================== 16 37 97.0 34 GTTGCAGCCTGCTTTTAAGCGGGCTGAGGATTGAAAC # Left flank : CTGAATCTGGCGCCCTGGGCCACCGATGAAGAGGTGGACTTTCTGCTCTCGGCTCTGGAATTCGTGGCCGAATACGGCGAACGCTTTGTGCCGCTCTACGACTTCGACTGGACCACGGGGGCGTGGCACCACCCGGCCGACACGGCGCCACTGGACCTGTTTGGGGCAGAGCGCCCGGCACAGGGCAGTGGACCCGTGCTCTATGCCGAGTATTTGGCGCAGGCGCACGCCCTGGCCGAAGGGTTGGCGCCGGTAGGGGAGGGGAGACCCATCCCGCCCCATGTCCCCGCTGATCTGGTCTTTTTCGTGCATTGAAGCTGAAGCGCGAACCCTGGGCGATGACAGGAAGTTGGGAGGTTCGCGCAGGCTGGGGTGGGTCACTGGCACGCTCAGGTGCTGCTGAACCTCCATCTACCGCACCCTGGAAGCTTGACGCTGTAAAGGGGTTCGCGTTTTCTAGCCCGCAGCTTATGATCTGGAGGCATTGAGAACGCGTGCCT # Right flank : TTCCACAAAGAATTCCTCTAAGGCGCCGCAGCCGCTCCACACTCACAGTCCCACCCCCTACCCTCCTCGTCCCCTCTACACGGACAGAAACCGTGCCGGCCAACCCCAGTTTCTAGGCAGCCGCCTGCCAATCTCCCGGGGCTCTTCCTCCCCTCACGGTCAAAGGGTCTAAAATACCTAACGAGCGTTTGCTAGACAGATTTCCGTTTGGGTGGGGCCAGGGCAACCCCTGCGCCCGCCCCGACGCCAGGAGGCCCCAGGTCATGATTCAACCCTTCACGCCGGAACCCATCCGCTACGTTGCGGAAGACGGGACCCCCGTGCAGCCGCTGCCGGCGCGGTTTACGCCAGAGCTGCTGCGCGAACTGCACGGCCTAATGCTTCAGGCCCGCGAGTTCGACCGCAAGCTGATTACCCTGCTGCGCCAGGGCCGCACCACCTTCTATGCCCAGTCCAGCGGAATGGAAGCCACCCAGGTGGGGCTGGCGCGTTCCATTCGT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCTGCTTTTAAGCGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 1267-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXV010000006.1 Deinococcus multiflagellatus strain KACC 19287 6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 1266 37 100.0 31 ..................................... CATCTCGACCGGCTATGGGGATGCCCAGAGC 1198 37 100.0 35 ..................................... GCCTGTGCGCGTGTGGGGGCGGTCGCATGAGTGCG 1126 37 100.0 34 ..................................... ATAAGGCCATTTTCCCCCCGACCCCTGAGCCCGC 1055 37 100.0 34 ..................................... TGCGCGGCGTGCGCGTGGCCCCCGCCGCCTAAAA 984 37 100.0 36 ..................................... CAGTATTCGAGGGCGGTGCCGGGCAGAGCGAGCCCG 911 37 100.0 33 ..................................... GGACGCGCTGCACTCGCAACGCTCGCGCCGGTA 841 37 100.0 35 ..................................... CGCAAGGTTAGCTAACGTGGACGCGGCTCAGGCGG 769 37 100.0 35 ..................................... GCGCGGGCGTGGCGGAGTGGCGTCAGATCAACGCC 697 37 100.0 36 ..................................... ATAGGCATTGAGCAGTGAGGTCAGGGCATCTGCCGC 624 37 100.0 33 ..................................... ATGTGGGTGACTCCTTTTAGCGGGGGCCGCGCG 554 37 100.0 48 ..................................... CGGTGGCGGACTTCGCCCGCGTGCTGTGGGCCCACCTGCCCGGCGTGA 469 37 100.0 36 ..................................... CCATGAGGGTGCCCGGCTCGACGCCTGCAGGCCAGC 396 37 100.0 33 ..................................... CCCGCGAAGGCTACTACGGCGTCTATACCGTAC 326 37 100.0 35 ..................................... ATTGCACCGCCGCGACGGCCGCTGCGCGTTCTGAG 254 37 100.0 36 ..................................... GTGGACCATGGGGATGGGACGGCCGCCCTGCACGTC 181 37 100.0 35 ..................................... CAGCGCCATCATACGGGTGTCTGCGTCATTCAGGG 109 37 100.0 35 ..................................... ATATCCACTTTGCTCGATCGCCATGCGTTCAGGGT 37 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================ ================== 18 37 100.0 35 GTTGCAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Left flank : GGAAGCGGGGCCTGCCTGTATCTTCTTCGGCAAGCCCCGCCCAGACCCCTGCTCAGCCCCCGATGGGCCGGGTGGGGTCCTCCAGGGGCACGACGGGCGCTGCTGGGCCCCCTGGATGGATTGGTGTGGGGCGCGCGGCGCTTGGTGGCACCTGCAAGGCAAGAAGGGTTACAAAGGCGGCCAGGGTCAACTTGAGCATGAACTCTCCCCTCCAGAGCAGTCCTCTCTGGATCAGCGCTCACGCGTCTTGCGCGGCGCAGGGGCAGAGTGCGGGGGCAGCCCGACACTGGCTGTCGAGTTCAAATCGCGCCTATGACCTCCGCGCGAACCCCGGGCGACGGAAAAACGCCGTGGGGTTCGCGCGGGACTATGGGTGCCGTTCAGGACGAAGATTTCAGTGCTGTTGAGGTTGCTGGGCAGAACGCGGCAACGGGCCGGGCCCTGGGTTCGCGCAGCGGCCTGCAAAACTTGCGTCAGGGACGCTGGCGCGGCACACTACT # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.30,-15.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 2 12704-13241 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXV010000006.1 Deinococcus multiflagellatus strain KACC 19287 6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 12704 37 100.0 35 ..................................... TCTAACAACTGGAAAGACGGCGACCTGGGCCTAAA 12776 37 100.0 32 ..................................... CTGAAAGACAACCCAGAATTTGCAGTCAAGCC 12845 37 100.0 35 ..................................... CTGAGCCATAGTCGGCGCGGCAATGTCCCCGCCTG 12917 37 100.0 36 ..................................... TGCGTGAAGCTCGTCTGTGTACGGGTCACGTTGCCC 12990 37 100.0 35 ..................................... CAGCGGCACATGCTGGTAAAGCTGGGTGCCTGCGT 13062 37 100.0 36 ..................................... GCCGCGCCACCGACAGCTACCGCGCTGTGGCCCCCG 13135 36 94.6 34 .................A...........-....... ACGGCGCGAATCTGTAGCGTGCGCTTTCCGTTAC 13205 37 81.1 0 ......A.T.....C..CT.....T...C........ | ========== ====== ====== ====== ===================================== ==================================== ================== 8 37 97.0 35 GTCACGGCCCGCCTTCGGGTGGGCCGAGGATTGAAAC # Left flank : CCGCCGTACCTGCACCGCTGATGCTGGATTTCCTGGTGTGCTACGACGTGAACACAGAAACGTCCGCCGGGCGCCGCCGCCTGCGCCGGGTGGCGAAAGTCTGCACCTCGCACGGGCAGCGGGTGCAGAACAGCGTCTTTGAGGTCAGCGTGACCGACGTGCACTCCTGGCCCTGCGCGAGCGGCTGCTGGCCGAGATGGACCCCACCGAAGACAGCATTCGGCTGTACCGCCTGCGCCAGCCGCGCGACAAATTTGTCGAAGCGTACGGACGGGACCGGTACGTGAATTTCTCTGACCCCTTGATTCTGTAGCTTTGCCCTGCGCGAACCCTCCGCGACGAAGAAACGCCGGGGGGTTCGCGTTGTTCCCGACTCGCGTCTGGGACAGGTTATATGACAACTTGAGCATGTAACAAGTCTCTGGAGCTGGAAAGCCAGGAGGGGGTTCGCACAGAGGGACGATTTGACGCCGTCCTGGTGCGGGTCAAGTACCATAACT # Right flank : CTCAGCAGCGGCCAAGGGTTCACCACCCCCGGCCGCTGCCACTGTCCATCACAACCGTGTCCGAATCTCCCACAGTTCGGGGAACAGCACGGTTTCCAAGGCGCGGCGCAGGTAGGCGGCGCCGCTGGTGCCCCCAGAGCCCCGTTTGAAGCCGATGGTGCGCTCCACCGTGGTCATGTGGTTAAAGCGCCAGCGGCGGAAGTTGTCTTCCACGTCCAGCAGCTTTTCGGCCAGCTCGTACAGGTCCCAGTAGCGCTCCGGGTCGCGGTAGACCTGCAGCCACGCGTCAAGCACGGCCTCGTTCAGCACCGGGGGCTGGCTCAGGTCACGCCCCAGAACCTCCTGCGGCACCGGCAGGCCGCGTGCCGCCACCAGCCGCAAGGTCAGGTCATACACGCTGGGGGCCTGCATGGCGGTTTGCAGCGGCCCGTGCAGGTCGGGGCGGTGTTCATGGGGGCGCAGCAGGGCTTCAAAGCGGTTGCCCAGCAGGAATTCCACCA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGGCCCGCCTTCGGGTGGGCCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-18.20,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 184-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXV010000083.1 Deinococcus multiflagellatus strain KACC 19287 83, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ================================= ================== 183 39 97.4 33 C...................................... AGGGCCTCAAACCGCCCGTCGAGGAACTCTCCC 111 39 100.0 33 ....................................... CTCGCTGAGCTGCTTGGTACCGATGGGGGCGTT 39 39 100.0 0 ....................................... | ========== ====== ====== ====== ======================================= ================================= ================== 3 39 99.1 34 GGGTTGCAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Left flank : AACGCGCTGGACCTGCAGGGCCAAACCCCGG # Right flank : C # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTTGCAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.80,-19.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : NA //