Array 1 242485-244703 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRLT01000002.1 Bifidobacterium longum strain AM11-5 AM11-5.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 242485 36 100.0 28 .................................... TATATCCCGGTGAAACCGTTTGCTATGG 242549 36 100.0 28 .................................... ATGCTGACCAGCCTGATTCAAGGCATCA 242613 36 100.0 28 .................................... ATGAATTTGCTGAAGATTATTTCAAGCG 242677 36 100.0 28 .................................... GTCATGCCGAGACTCTTACTGCACCTAG 242741 36 100.0 28 .................................... CCCGTGGAATAATCGCGCAGACGTTCAT 242805 36 100.0 28 .................................... ATGTTCGGACAACCCGTGCGCGTCGAAC 242869 36 100.0 28 .................................... AGGCAACGCGCATGGATGAGGCAATCTA 242933 36 100.0 28 .................................... ATGACGGGCATGCCCTGTATACGCTCAC 242997 36 100.0 28 .................................... GAGGCCCGCGACCTGATTTCCAGCGGCG 243061 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 243125 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 243190 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 243254 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 243318 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 243382 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 243446 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 243510 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 243574 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 243638 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 243703 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 243767 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 243831 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 243896 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 243960 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 244024 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 244088 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 244153 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 244218 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 244283 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 244347 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 244412 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 244476 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 244540 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 244604 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 244668 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 35 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGTGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCGTGGAACACATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //