Array 1 7519786-7516887 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007699.2 Streptomyces lydicus strain A02 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 7519785 28 100.0 33 ............................ GCGCATGTTCGGGGGCCTGTTCGCCGGGCTGAC 7519724 28 100.0 33 ............................ GTAGCGGAAGAACGCTTCGATCTTCGGTGTGGC 7519663 28 100.0 33 ............................ CTCGTAGCCGTCCTCCGCCTGCTCTTCCGTCGC 7519602 28 100.0 34 ............................ ACCGTCGTTTCAGGTCCTGTCAGCGGCCGGTCGC 7519540 28 100.0 33 ............................ TCCCGAGTCTTTCCACCACTCACGAGCCAGAGC 7519479 28 100.0 33 ............................ TCTCCCTGATCAGAACCGGGACTTGGACGGAGC 7519418 28 100.0 33 ............................ TTGCCGGGCTGCTCGGACCGGACGCAACCGTCG 7519357 28 100.0 34 ............................ CCCCTGCGCAGCAGCTCGCCGCCGTGGCCCGCGT 7519295 28 100.0 33 ............................ CTTGTCCTTCTTGGTCGTGTACCGGTGCAGATC 7519234 28 100.0 33 ............................ GAGGAACGTCTGTTCGGGCGTAAAGGACTGGCC 7519173 28 100.0 33 ............................ ACTCTCCCGGTAGAGAAGCATTGTTTCCATGGG G [7519156] 7519111 28 100.0 33 ............................ GTACGAGTGCCCCAGTCCTTCGCCGGTCAGCCG 7519050 28 100.0 33 ............................ GCGAGACCGCGACTGATCGGCCTCACCCCCGGG 7518989 28 100.0 33 ............................ CTGGCCGGCCCCTGGCTGACCCGTCAGCGTATG 7518928 28 100.0 33 ............................ CTCAGTGAACCGCTACGCACGCGTAGTCCTGAC 7518867 28 100.0 33 ............................ CGTCCGCGGCCAGTGGATCGACGCGCCAACCAG 7518806 28 100.0 33 ............................ CAGCGGATCACACCAACTCCCAGAAAAGACACG 7518745 28 100.0 33 ............................ CCGTGATTCAGGCGCCCGACGGCAGATGGTCGT 7518684 28 96.4 33 .....T...................... CGTGCGCCGCGTGGCCCGGTTGATCCTGGTGGA 7518623 28 100.0 33 ............................ CCGCGACCAGGTTGCCGACTTCGACGCGTTTTT 7518562 28 100.0 33 ............................ GTCTGAGGGTCCGGCAGAGGACGCGGAGTCCGA 7518501 27 96.4 33 .................-.......... TGGGGGTCGTAGGTGGGTAGCGCAGTCCTACCG 7518441 28 100.0 33 ............................ CGCCGACGGCCCCACCGCACCGGTGCGCGCCGC 7518380 28 100.0 33 ............................ GTCCACCACCGGTGTCTTCATGGGCCAAGCCTT G [7518363] 7518318 28 100.0 33 ............................ GCCTACCGTGAGGGCGGTACACCGGGTGGTCCT 7518257 28 96.4 33 ....................A....... GGGCTCTTCGCCGGTCTTCACCTTGTACATGGA 7518196 28 100.0 33 ............................ GCTCAAGACCACCACCGAGTACCGCGAGGAACC 7518135 27 92.9 38 .............T...-.......... CCCCCCCCCACGCGGGAATGGCGCCCGCGTCGGTGACA 7518070 28 100.0 33 ............................ TCTGATCGTCCCCGAACTGTGGGCGGACATGGC 7518009 27 96.4 33 ................-........... GCCGGGGCCGCTCGTGGAGCGGTACCGGGAGTG 7517949 28 92.9 33 .......T...G................ GCGGTTCTGCCGCTGCGGGAGGGGACCGTGGCG 7517888 28 100.0 33 ............................ GCCGGCCGCTGGTGTGCGGTCCCACCACCCGAA 7517827 28 100.0 33 ............................ CCGCTTGTGCCACAGGTCCAGGTACCGGCCGGC 7517766 28 92.9 33 .................T..T....... TCGGGTCTCCCCGTCCCCTCGGCATAAACGGCC 7517705 28 100.0 33 ............................ GATGCTCTTCCTTGTTCGTCACGCCGAATCGAT 7517644 28 100.0 33 ............................ GTACCGGGAGCGCGAGTTCGGCGTCTTCCAGGT 7517583 28 96.4 33 ..................A......... CGCCGACGCGTCCGCCCGCTCCGGCGCGTCCTG 7517522 28 92.9 33 ...........C.........A...... CTTCCGTGGGACGGAATGTGAAGGGAAAAGATC 7517461 28 92.9 33 ........................A.T. CAGGCCGTAGTTCGACACCAGGTGATAGGCGTC 7517400 28 89.3 33 ...........G....T...A....... GGCGTGTTCGAGTCGGCTGACGACGTCGTCTCC 7517339 26 85.7 33 ....C........--......A...... CGAGATCACCGTCACCCCTGTCGTGCGTGATCG 7517280 28 96.4 33 .G.......................... GGTCTGCCAGGACTGCCCCTTTCGCGCACGGTG G [7517258] 7517218 28 96.4 31 ............A............... CTGGGCGGGCATGAGCGACCTCCCGGTTCGC T [7517192] 7517158 28 85.7 33 ..........T....CT.....G..... CACCAGGCACCGGGCCGCGGGAGGCCCGATGAA T [7517132] 7517096 28 78.6 33 ..G.......AG..T........GC... CGGTCGCACGGCACACGCGGCCGCCTCTCGTCG 7517035 28 75.0 33 ..G........G..TA..A....GT... ATTCCCAGCCGAACCCGGAGCTGGACGGGGCTG 7516974 28 82.1 32 ..GA.......G..........G...T. TCACTCGTTTTCACCACCCACGGCACCACCAG 7516914 28 78.6 0 ..G.....T..G....A......GT... | ========== ====== ====== ====== ============================ ====================================== ================== 48 28 96.1 33 GTCGTCCCCGCACCCGCGGGGGTTGTCC # Left flank : GTCCGACGGCAACCTCCCCCACACCAGACCCGCTTCCCTGACCGGGGCAGCCTCCGCATCGTCCAGCGCCTGAAAGGCAGGGCACGCCTTTCCGCAGTCGTGGATCCCACAGATCCACATAAACCACAGACGCCCACGCCCGCCACTGACCTCCTCCAGTCGGCGCCGTAACGCGACCGACAGGTATCGCTCCCACATCACCTCCGCCATGGCAGCGGTGTCCAGCAAGTGCCCAAGCAAGAGGTGGGTCCGACCCCCGTTCCGCGCCGCGGACTTCCCCCATAACCGCGACACCCTGGCAACGGTCTCCTCCGACAGTCCCATCCCTCGCATCACATCGACAACCGACCTCATGTGCTCCACCAGCCCAGCCCTCTCCGTACAGTGGACCCGCACCATAGACCCGCCCGCTGACAATGGCCCTGGACCACATGCCCCCACCGCCGACACTGCCAAATGAAAACCGGCCCCACCGCTAGCATCCACGCAGGTCAAGAAGT # Right flank : CAAACACCTGCCCGAGGACAAGAACCTGGGCGAGGTGGTTCCCTCAGTGCGTGTGCGGATGCTGCTCCTGGGCGTCTATGACATAGGCGGTCACTTGCGGGCCTCTTCGGACTCCCACAGGGGTGTGCGGCGATCGTACGGAGAGCCGCTGGGTGACCAGGAATAGAGGGTTGGGCGTGATACTCGTCGGCTCCGAGTTCCTGCCGGAATAAATGCCTCCTGGGCTCGATTGTTCGTTCGGAGCGATCGAGGTGGAGCCGGGGTAGGCCTATGAGCAAGAGGTCGCGGAGAAACCCCTTGGCTCGCTGGAGGTAGCCGTTCCAAGTGTCGGATTCCTTCGCCCAAGGTTGGTCTGGGTGGGCATGCGGTCCGCCGTTGGCTACGGTCTTCACGTAATGCAGGGGCTTACCGTCGGCCTCACCGTGAACGGGTCCATCGAGGCCAGGTTCGACCTGGGGCTCCAGGCCGCGGGCTTGCCCGAGGATCTGTCCCCACGGGAT # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTTGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [46-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7602592-7599984 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007699.2 Streptomyces lydicus strain A02 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================== ================== 7602591 29 100.0 32 ............................. GCTCTCCAGCGCTGCGGGTATCGTCGTGGCCG 7602530 29 93.1 32 ..A.......T.................. TCAACCTGACATGTCAGGTCTTGACGGCGTGA 7602469 29 100.0 31 ............................. GCATGGGGCCGGGGCTGCATCCGCTACGGCG 7602408 29 100.0 32 ............................. GGCGGAGGGCTCCGAGCGCGGCCGATCAGGTC G,C [7602390,7602403] 7602345 29 100.0 32 ............................. GACCGCGGCACCGTTCACCTGGTGGGCAACGG 7602284 29 96.6 32 ....................C........ GGGGCACCGTCCGGATGGTCACGTAGATCCCG 7602223 29 100.0 32 ............................. TACGCCAGGTCCGACCGGTCCGAGTGACCGGC 7602162 29 93.1 32 A..T......................... GAGCTCGATGCGCTGACCCGCCGTACCGAGGC 7602101 29 96.6 32 .....................A....... TTCGACCTCGACATCGGGGCGCCGACCAAGCA 7602040 29 96.6 32 ....C........................ CCGTAGCTGTCGTCGTCGGGGTCGGTGGGCTC 7601979 29 100.0 32 ............................. TGCGCTGCCGCTGGGGCATCAGCGTCTACCAG 7601918 29 100.0 32 ............................. TCCTTGCGTACCGCGGCGAGCAGAGCGGCAGG 7601857 29 96.6 32 ..................A.......... CCGGACGTGCCGATGAGTTCCCTGCTCGGGTG 7601796 29 100.0 32 ............................. GTAGGAGCCTCGTATGGTTGGGGCCGCCGCGT 7601735 29 100.0 32 ............................. GTGTACTGGGTGCCAATGCCGGACAGTTCCTC 7601674 29 100.0 32 ............................. CTGCACGCCGTGAGGCGGTCGCTCTTAAGGCG 7601613 29 100.0 32 ............................. TTTGGAGAACTGCTCGTGCCCGAGTCACAGCG 7601552 29 100.0 32 ............................. GGGACATCGCCGTCGTCAAGGCCTGGACGACC 7601491 29 96.6 32 .................A........... GGCCCGCCCGGTAGCTTGCCACCCTCCAGATC 7601430 29 96.6 32 .....................A....... CGACCGTCCACGCAACCCTCGGTCGAACCTCG 7601369 29 100.0 32 ............................. GCCTACGACACCCCGCGCCTACAGGTGCGCGT 7601308 29 96.6 56 ............A................ TGACCACCGGCCTGTCCTACACGGAGTACCGGGTGGTCCCCGCGACTGCGGGGGTG 7601223 29 93.1 23 T..........A................. ATCCCTGTGACGGTGCTGCCCTG Deletion [7601172] 7601171 29 89.7 32 ...C...G....................T CGGCGCTCCAGGTCGGCCGGTTCGGTGTCAGG A [7601164] 7601109 29 100.0 32 ............................. TGACCTGCTCGCCTTCGGCAAGCGGGTGTGGG 7601048 29 100.0 32 ............................. AGGCCCTATGGCCTCCGCTCAGTGGTGTCCCA 7600987 29 100.0 32 ............................. ATCGTTGACGGGCGCGTGGTGATGGTGACCGG 7600926 29 100.0 32 ............................. CTGACGCCCGCCGAGGCCCGAGAGGTCGAGGC 7600865 29 100.0 32 ............................. TGTGGCGCCGTGGTCATACAAGGACCTGATGG 7600804 29 96.6 32 .....................A....... TGGCCCGGACGCAGTACGCCGGCCGCGAGTCG 7600743 29 96.6 32 ..................T.......... TGGCCTACGACTGGGCGCGGCAGATGACCGAC 7600682 29 100.0 32 ............................. TGGCCTACGACTGGGCGCGGCAGATGACCGAC 7600621 29 100.0 32 ............................. TACATCGCCGCGGTCAAGCCGTACGCCGGTAA 7600560 29 100.0 32 ............................. GGCCTCGAGGTCGAAACGCACCCCGCCGACTG 7600499 29 93.1 32 .........AG.................. GTCGCAGGAATCTCCGGCGGCGTGGTCGGGAT 7600438 29 100.0 32 ............................. GGGCCGAACGCTGCCTACATCGCGGAGCTGGT 7600377 29 96.6 32 ..A.......................... TCGGAGGCGGCGTCGTACTGGCTGGACCGGGC 7600316 28 96.6 32 .....................-....... GAACCGTGCTGGCGGCCGTGCACGGCCGGAAT 7600256 29 100.0 32 ............................. GTGTTCACCATGGCGGTGTACTCGTCGCCGCA 7600195 29 100.0 32 ............................. GGCGGCAGGCCGACTTTGGCGCGGCGCGCATC 7600134 29 93.1 32 ...............C......C...... GCGGCGTGGGCGCGCACCGGCAAAGGCAGCGA 7600073 29 96.6 32 ............T................ CCGGCCACCTCGATGACCTTCACGGTCGGCAG 7600012 29 89.7 0 ............T............CA.. | ========== ====== ====== ====== ============================= ======================================================== ================== 43 29 97.8 32 GTGGTCCCCGCGCCTGCGGGGGTGTTCCC # Left flank : CACCGCGCCGCGACGCAGAGCAAGTCACGCAACGCCTACGGCGGCCCGAAGGTCGGATACGCATTCGTGCACACCGTCATCGACGACCACTCCCGCGTCGCCTACACCGAGGTCCACGACGACGAAACAGCCGTCACCGCCGTCGGCTTCCTGCACCGGGCTGTCGACTGGTTCGCTGACCGTGGCATCACCATTGAGAGGGTCCTGTCGGACAACGGCGGCGCGTACCGCTCGTACCTGCGGCGCGACAACTGCGAAGCGCTTTCGATCACCTCGAAGTTCACGCGCCCTTACCGCCCGCAGACGAACGGGAAGGTCGAGCGCTTCCACCGCACCATGGCCGATGGCTGGGCCTACGCCCGCTGCTACACCAGCGAGCAAGAACGACGCGACGCACTGGCCGGTTGGCTCCACCAGTACAACCACCACCGGCCCCACACCGCGTGCGGCAACCAGCCGCCATTCTCACGATTGATCAACGTGCCCGGTCAGTACACCTA # Right flank : TGCAGGCCTCTTCGGGCTCCGACAGGGGTGTGCGGCGATCGTGCTGAGAGCCGCTGGGCGGCCAGGAATAGAGGGCCGGGCGTGATACTCGTCGGCTCCAAGGCCCTGCCGGAATAAATGCCTCCTGGGCTCGATTGTTCGTTCGCAGTGATCGAGATCGAGTCGGGGGAGGCGTATGCGCAGCCTCAAGGCGTTCCGGGTGAGCGGCGGGCAGGCCACGGAGATGCCGGGCTCGTCCGTGGCTCTGGAGCGTCATCTGCAGTCGCTGATCGAGGGCAATATGGAGGCGATGCTCGGCATCCGTTTTCTGGCGAGCGAGTATGCGACAGGTCGGCACCGGGGCCGGATCGACTCTCTAGGTTTGGACGAGAACGGGACGCCGGTCATCGTGGAGTACAAGCGCTCCCGCGACCAGAACGTGACGAATCAGGCGTTGTCATATCTCTCGTGGCTCCATGACCATCACCATGAGTTCGAGAGCCTGGTCAAGGAGAAGCTCG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.87, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [12-13] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //