Array 1 33926-28800 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPAT01000016.1 Campylobacter concisus strain AAUH-15UCpp 1102593, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 33925 30 100.0 37 .............................. TAACCAAAACAACAGCGGTGAAAAAATGCTAAATGGA 33858 30 100.0 35 .............................. ATTTCAGCAGTCGAAACAGCAGTAAAAAAAGCAAC 33793 30 100.0 37 .............................. GGTGTATTCTCGCCAAACCTGGATCGAGTAGAATTAA 33726 30 100.0 35 .............................. CCAAAATCAAGAACGCAAGAAGTAAAAAAATAAAA 33661 30 100.0 37 .............................. ACAAGAACTTGAGCAACACCAACACGATCAGAAAAAT 33594 30 100.0 36 .............................. TCTAAAAAGCTCTTTATCGCATTTAACCTTTGTTGC 33528 30 100.0 37 .............................. GCTTTGTAGCTTGTAGGGTGTAGGGATTTGTTAGGGG 33461 30 100.0 36 .............................. AGGGCGTATCTGTACTTTTTCAAGTACTTATACAAG 33395 30 100.0 35 .............................. TATTTGCGCCGTCATAGACGCTACGCACGTTTTTA 33330 30 100.0 38 .............................. ATATCCATTTCGATGTGTCGCTACCATCATGGATAAAA 33262 30 100.0 37 .............................. CGTTTTTAGATGACGGCATCACTCCGCAATTTGTAGA 33195 30 100.0 36 .............................. GTTTTGAGATATTTTTTGCGATGATTTCTTTCTCAA 33129 30 100.0 34 .............................. TCAAGGCTTGGCAAAAAAGAGATGGATTTATTAA 33065 30 100.0 37 .............................. CTTTAAATATAGGGCAGTTTAATATAGGTATAACAAT 32998 30 100.0 36 .............................. TCCGATCGCCCCTTAAAATGGTATTTCATCGGTGCC 32932 30 100.0 35 .............................. CTAGATAGGCAAGACGCAAGGGAAGCAAGGGCACA 32867 30 100.0 37 .............................. TTTACATTTTAGGAAAGGTTAGAAAAATGACACTTGG 32800 30 100.0 35 .............................. AATACATAAGCGAAAGAGAAATAAAAGAAAAAGAG 32735 30 100.0 38 .............................. TATTGCTTCCGCCCCAATCCCAACTCATTTTTTCCTCC 32667 30 100.0 35 .............................. TTGATGGCGAAAATAACAGAGGCGATAAAAGAGAA 32602 30 100.0 36 .............................. GTGCGATCTCTTGCTCTTTTGTGATTTGTGGGTCAA 32536 30 100.0 38 .............................. TTGATTAGGAAACATTCTCCACTCTTTGGCTAATTTTT 32468 30 100.0 35 .............................. GGCAGGTAGCTGCGACTTCTCAAACGGCGTAAAAG 32403 30 100.0 38 .............................. AAATCTCAAGAAAAAATTAATAGTGAAATTTCTAAATA 32335 30 100.0 34 .............................. ACATAGCCCCGAAAAGGTGTTTCGTCCAAACGGG 32271 30 100.0 35 .............................. ATCAAATTCCTAATTCTTCCGTGTCTGCTATTAAA 32206 30 100.0 35 .............................. TAAGTAGCTATATCACTTCTAAGAGTAGAAGGACT 32141 30 100.0 36 .............................. ACAAAAATCAATTTGACCGCACTGCTTGGTATTCTT 32075 30 100.0 39 .............................. TGTTTGCTAGGCTGAATTCTTGCGTGTTCTCTCTTTTCA 32006 30 100.0 37 .............................. ATGAAACCTTGATAACCTTTTAGGCTCTTAAGGCTCT 31939 30 100.0 38 .............................. TACAATCCCAAAATCTCCAAAACATTTAAAAGTTTTAG 31871 30 100.0 36 .............................. TCGCCCGCTTAGCCCCTGAAACTGGGGATTATTGCA 31805 30 100.0 38 .............................. CAGATGAAGAGATAGGGGGCTTAGGCAGCTCAAGATGT 31737 30 100.0 36 .............................. GGTTTATCATAACCTTTAAAAAACTCATCGCAAAGC 31671 30 100.0 36 .............................. TTAAGTTCAGCAATATATCTGTTTGAGTTATGCCAG 31605 30 100.0 34 .............................. GGGGCGTAGTCTTGTGGGATAAAGTCGGCGTATT 31541 30 100.0 36 .............................. GTTGGCTTTTGTAGCCGTTGATCTCACGGCGGTGGC 31475 30 100.0 37 .............................. GCCCTTTCCAAATTTCAATAAATGCGTCAAGTATTAT 31408 30 100.0 34 .............................. GAAGCCTTGCAAAGAGCTGGTGAGATAAGCGAGC 31344 30 100.0 37 .............................. GATATATCCTCATTTTGTAGATTGATCTTGTTCATCA 31277 30 100.0 37 .............................. ATAAAAAACTCTTACCTTTAAGGAAGTGAATATGCGA 31210 30 100.0 37 .............................. AAACTTGATCGTAAGCGACATTATAAGTAAGGTCTTC 31143 30 100.0 35 .............................. CAGATAGATAGTGCCAAAGATATAGCTCAAAGAGA 31078 30 100.0 34 .............................. GCTTTTGCATAGTCAGTGTTGAAGCTATCTATCT 31014 30 100.0 35 .............................. AGCTTACAATTACTGAAACAAATTTAAAAGATATA 30949 30 100.0 37 .............................. AATTTTGTGGAGCATAAAAAATATTTGTATAAATTCT 30882 30 100.0 37 .............................. CAAACTACAAGGGTACGAAAAAAATCAAGAAAAAATT 30815 30 100.0 39 .............................. CAAATATTGCAAAGAACATGACGAGTGGTGGGGCTATGC 30746 30 100.0 37 .............................. TGGATAAAGTCTATCTAAATTTAACAATTGAGCAATA 30679 30 100.0 37 .............................. ACTGCGCTTTATCGCGACGGCGAGGCATTTATCAAGG 30612 30 96.7 35 .........................A.... CGAAACCACAACGCTTGAAATACCAAACATCTATG 30547 30 100.0 38 .............................. TAAATCTAACAGACATAGCTGTAAAACTAAGGAGATAG 30479 30 100.0 35 .............................. CTCCCATTTAGCCTTCCAAAGTAAAGAGAGAGAGG 30414 30 100.0 37 .............................. TATCTGCTCCCTTAGCGTCGTTACCAAGAGCAGTTAA 30347 30 100.0 37 .............................. AACACCCAGTCGCCGTCATCGTCGCTTCGTTCATCAT 30280 30 96.7 36 .............................T AAGTAGCCCTGCGGATATTTGCTTGGATGAGCTGTT 30214 30 100.0 38 .............................. AATTTCTATATGGGGTCTCTTCACTCCCTGCTCGCCTA 30146 30 100.0 36 .............................. ATATTTGTGATAATAATTTAGAAGCGTCAAAGCTAG 30080 30 100.0 35 .............................. GTGGGATATGTTTTGCCAAGCGTTCAAAACTTCTT 30015 30 100.0 36 .............................. TCGCGAACGTAAATGATGTAGTGGTAGGAGGTATTG 29949 30 100.0 35 .............................. GCTACTGCATAACCTACGCCATCGCCTAATACACT 29884 30 100.0 36 .............................. TTCTTTCATCGTTCGTCATTTTCGTGTCCTAATCTG 29818 30 96.7 39 .....................T........ GGACATATATACCGCGCTGCGTATTTGCCAAAAGTGCCA 29749 30 100.0 36 .............................. TTAATCGACAGCGCGATCGATGATGTTTTGGATAAC 29683 30 100.0 35 .............................. CCAAAAAACCGATAGCTATGAATACAAAGACATTG 29618 30 100.0 35 .............................. CTTTTGGCGGTGGTAGCGACTGCTGCCGATAAATT 29553 30 100.0 35 .............................. TGGCCATATCTTTGGAATACGAAGAAAAAATGAAA 29488 30 100.0 36 .............................. TATTTTTGCTCGTCAAAGTATAGCTCATGAAAAAGG 29422 30 100.0 38 .............................. CAAGACCAAGAAAAGGCCATAATAGCCCCTGAGCTAGA 29354 30 100.0 35 .............................. GCTACTGCATAACCTACGCCATCGCCTAATACACT 29289 30 100.0 36 .............................. TTCTTTCATCGTTCGTCATTTTCGTGTCCTAATCTG 29223 30 100.0 35 .............................. AGCTTATTCTGGACGCGAGCAAAGGGCTAAGCAAA 29158 30 100.0 35 .............................. CCAAAAAACCGATAGCTATGAATACAAAGACATTG 29093 30 100.0 35 .............................. CTTTTGGCGGTGGTAGCGACTGCTGCCGATAAATT 29028 30 100.0 35 .............................. TGGCCATATCTTTGGAATACGAAGAAAAAATGAAA 28963 30 100.0 36 .............................. TATTTTTGCTCGTCAAAGTATAGCTCATGAAAAAGG 28897 30 100.0 38 .............................. CAAGACCAAGAAAAGGCCATAATAGCCCCTGAGCTAGA 28829 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 78 30 99.9 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTCAAAAAGTGCATCTGCGAGGACGCGCCTTATGAGGGCTTTAGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTACACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : ATATGTTTTCAACTTCATTTTTAGTTTGACATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGATTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTGTCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTTTCTTCATAATACTCTTGTTGCTTTTTATTTTGTGGCTGTGCTTGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //