Array 1 7991-8885 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDEY01000008.1 Streptococcus pasteurianus strain HC-2909-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7991 36 100.0 31 .................................... AATGCACGTGAAGAAGTTCAACGAAAAAACG 8058 36 100.0 30 .................................... GTCAAGCTTGTATAAAAACAGTGATATCAA 8124 36 100.0 30 .................................... TTATTCCACAATCTGTTGCAGACTGGTTAG 8190 36 100.0 30 .................................... TATCGTAAACGAAAACATGACTGTCATTGA 8256 36 100.0 30 .................................... GTTGACTGGTGGCGAGATTACGAACGCACT 8322 36 100.0 30 .................................... GGCAGAGGGATATTAAAATGACTAATTTAT 8388 36 100.0 30 .................................... TTGAAAATCAAATTTAAAAGCTTCTGGACA 8454 36 100.0 30 .................................... CTGCAATGTCGCCGAATTTTGTAATGGCGC 8520 36 100.0 30 .................................... CTCACGGCTCGAAGAGAAATTCGACGATAA 8586 36 100.0 30 .................................... ATTGTCTGTGGAGCTTTCAGATGGTGATAT 8652 36 100.0 30 .................................... TGTCCACAAATACATACCTTTAACTAAAAC 8718 36 100.0 30 .................................... AAACATTTCTGGCGTATAGTTCAGCTCCTT 8784 36 100.0 30 .................................... GCACACAATTTCAGTTGTAGCTAATTTTGT 8850 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 14 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ATCCAGCAATTTTTCACAAAGAAGATGATGGAAGTTTTTGGGTAGAATTTCCAGGATATAGTGGTGGTACCGAAGGTGATGACGTCGAAGAAGCGATGAAAAATGCTCGAGAAATGTTAGAAAGCTCATTGGCTGCTTATTTAGATGAAGGGTTAGAGCTTCCAAAAGTTGTTGATATGAGTGAATTATCAGTTGAAGTTGGTTTTATTACTTTAATTCAAGCAGCCCCTTCCCCATATTTAAAAAGTACCAAAGCCATTCGAAAAAATGTTACGGTTCCAGAATGGTTAGTCAGATTCGCTGATCGAGAATATGTTAATTATTCAGAATGTTTGGCACAAGTTTTAGAGAAAAAATTAAAGCTTTAAATTGCTATAAACGTTGTAAAATCAAGGTTTTTTAGGTATAATATAGTTAAAAATAATGAACTATTCGAGGCTGAAGTCTAGCTGAGACGAATGGCGCGATTACGAAATTTTGTGAGAAAAATGGTCCACGAG # Right flank : CGTCTGGTATTTAGGATTGAGCAGAAATAGTATTCTCAGAAACGTACTAAATTTTAGTGAAAACGCCTTTCAACATTTTTCAAAAGTTTTCTTTTATGGTAAAATAAAAACTGAATTTATTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGTGTGAGACGCGGGCTTGTTGGTGAGGTGCTTCACCGTATTGAACGACGTGGTTTTACAATTGAAAAATTGGAGATGCGCATGGCAACCCCAGAATTATTAGAAAAACATTATGCTGATTTGGTTGACCGCCCATTTTTCCCGCTAATCGTTGATTTTATGACAAGTGGTCCAGTAATTACTGGCGTTATGTCTGGAAACGAAGTCATCACTTCATGGCGTACAATGATGGGAGCGACAAATCCTAAAGAAGCTCTCCCAGGGACAATCCGCGGAGACTATGCTCAAGCACCAGACGAAAGTGGCGCAACATTTAACATCGTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 9527-10618 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDEY01000008.1 Streptococcus pasteurianus strain HC-2909-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9527 36 100.0 30 .................................... TGACTATAGACAGCTTCTATGGCGAATTAC 9593 36 100.0 30 .................................... CAGATGACAGAGTAGAAAGACGAATGAAAG 9659 36 100.0 30 .................................... CCTTCTTCAGCTTGGTGTAGTGTAGAAACA 9725 36 100.0 30 .................................... ACATACATGCGTGAAAATTACGACGGGAAA 9791 36 100.0 30 .................................... TGCTACACGAATTCTGTCACCATCTACATA 9857 36 100.0 30 .................................... AATGTTTTTTGCGGTAGTTGTTGCTGTGTT 9923 36 100.0 30 .................................... CGAATATTTGAAGCAAGACCTTACAGATAA 9989 36 100.0 30 .................................... TCACGACATGGGGCTCGGGAAAACGTACAC 10055 36 100.0 30 .................................... ACTTGGAATAGTGCTAGACCAGCCACTTGT 10121 36 100.0 30 .................................... CCAGAACCAAGTCACTTAGACACCGTTGCA 10187 36 100.0 30 .................................... GGTCTCAGGAAAATATATGTATGGAATGCA 10253 36 100.0 30 .................................... CGTTGTAAAAGTAAAGTGTGCCTTCGTTCC 10319 36 100.0 30 .................................... CTAAAAGTTGGTGGTCTGAACTTTGGTCTA 10385 36 100.0 30 .................................... TCTTCAAACGTCATATCAATACCATTTGGT 10451 36 100.0 30 .................................... AAATCGGAGTGTATGAAAATTACTACGATT 10517 36 100.0 30 .................................... ATGCACGATTACTATCTTTCTATCTATATT 10583 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 31 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATGGAAAAAACTTTCTTTATGATTAAACCAGATGGTGTGAGACGCGGGCTTGTTGGTGAGGTGCTTCACCGTATTGAACGACGTGGTTTTACAATTGAAAAATTGGAGATGCGCATGGCAACCCCAGAATTATTAGAAAAACATTATGCTGATTTGGTTGACCGCCCATTTTTCCCGCTAATCGTTGATTTTATGACAAGTGGTCCAGTAATTACTGGCGTTATGTCTGGAAACGAAGTCATCACTTCATGGCGTACAATGATGGGAGCGACAAATCCTAAAGAAGCTCTCCCAGGGACAATCCGCGGAGACTATGCTCAAGCACCAGACGAAAGTGGCGCAACATTTAACATCGTTCACGGTTCAGACTCACCAGAATCAGTTGAACGCGAAATCGCCCTCTGGTTTGGAGAATAAATAAAAGGAATTATTTCGAAGCTGAAGTCTAGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAATGGTCCACGAG # Right flank : CTCATTCCTCCTAATTAGAGGTAGACCGTGTAGTTTTATAGCTGTGCTGTTTATTTTACCATCTTATGATGCTTTTTTCTTGAAATGACTTCTAAAACTTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAATAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACGACAAGAGAAGATTCGTAATTTCTCTATCATTGCACACATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAGACGGTTTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGCATGGATTTGGAGCGTGAGCGTGGTATCACGATTAAGCTTAATGCGATTGAGTTGAACTACACGGCTAAAGACGGTGAAACCTACATTTTCCACTTGATTGACACCCCAGGACACGTTGACTTTTCATATGAAGTGTCACGTTCTTTGGCGGCTTGTGAGGGGGCAATTTTGGTTGTTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //