Array 1 6928-5367 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGA01000018.1 Thermosipho sp. 1244 contig_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 6927 36 100.0 38 .................................... TTGCTGTTGAAGAGGGGACGACGAATCTTATTCCAAAT 6853 36 100.0 38 .................................... ATTTTATATCTCGTATTGGGGTAAACAGTAACGGAACA 6779 36 100.0 37 .................................... TATAACGCGAAGAAGCCTTTTGCTGTTCCGCCGAAGG 6706 36 100.0 35 .................................... TAGATAAAACCTGCATACGCATTGGTCGACCACTT 6635 36 100.0 35 .................................... CAAATATCCATTTGCTTCCCATCTAGTTCTTCTAG 6564 36 100.0 35 .................................... GTTTGTAGATATCCATTATTCTCACCTCTTTTTAA 6493 36 100.0 38 .................................... CCTCAGGTTGCCCGTCAAATTTGATTACAGCGTCCCAA 6419 36 100.0 37 .................................... CAGTCTTCGTATTTAGCAACGTCGACTCCCATATAAT 6346 36 100.0 37 .................................... TATTGACTTGGAGTATATGGTGGTGGTATCTTGAATA 6273 36 100.0 39 .................................... ATATTGCTGAGCGCATAATGAGGTTTGGTTTCCCAAAAA 6198 36 100.0 36 .................................... ATAAATTTTATTCATTCTATCCCCCAGCTTAACAAT 6126 36 100.0 34 .................................... AAACTTGAAGCAAGGTATGGCTACCACGATGACT 6056 36 100.0 38 .................................... ATTTGGGAGTTGAAATAGCACCATCAGAAATTTTTGTT 5982 36 100.0 36 .................................... AAACGAGCGGCAGCATATGCGAGATACTCATCAACA 5910 36 100.0 39 .................................... ATTTAATCTATGTAGATGGCAAGCTTAGTATTACAGAGA 5835 36 100.0 36 .................................... GACAATCACAGAAAACGAAGATGCAGTTGTTGCTAA 5763 36 100.0 35 .................................... GTATCATTTTCTATAGCTGCTATAAGCTTTCTTAG 5692 36 100.0 34 .................................... TATAAAGTATCAGAGCACAAAGGATAATTATTAA 5622 36 100.0 39 .................................... TTCTGTATAAATGTACTCCATTAAACCACGCTGCTAAGA 5547 36 100.0 37 .................................... GATCATGATTATTATGGTGATTATCATTTTAGTAGTT 5474 36 100.0 36 .................................... TATCTACAAAATACGCATGGTTTCTACCAACAATAA 5402 36 94.4 0 .............G.....................T | ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 99.7 37 GTTAAAAAACCTAATTCCATAAAATGGAATTCAAAC # Left flank : CTCGGAGAACTGGAATATACTCCTTTCATTGTAAAGAAGTGAGTTTCATGATGACATATATAATCAGCTATGATATAAAGAAAGATAAGAAAAGAAATAAAATATCTAAAATATTAGAAGAATATGGACAAAGACTTCAATACAGTGTGTTTATTTGCCAAATTCCAAAAAAAGAGCTTTATAATATTCTTTTAAGGATAAATCCTATAATAGACAAGAATACAGATTCAATTTTAATTATTCCAATAAATCTATCTAAAATGGAAATTATAGGTACTGTAAAAATAGATATTTTAACCAATAATGATAATTATATATTATAACTAAAATCTATCCGCGAATCTTAGTTTTCTCAAAAATATATAATATCCACGGCAGTCTTCAATAAACAACTATCTAACATTAAAACAAACTTATTTAAAAATTTTTTAATCAAAAAATATTAATACACGCATTTACGGTCCTTGACAATTTATTTTTTTTGCTTTAATATTGATAGA # Right flank : GAATTGTTACTACACTTGTTTGATATCAATATTTATGTCTAAAATTTGATATAGAGTTTCAGCTACTTATACTGTACATATTATTAATAAAAAAATAAAAAACATGGTTACATAGCTTCTTTTATACTGAATCCCAAAAAGTTCCCGAAGTGACAAATAAAACCAACAAAGAGGCTTTTTTCTTTAGACAGTAGACTAAAAGATACAGACAAAAATGAAGAAATATATCTCAAATACGTAATGTTTACGTATGTTGTCGTATAACAATTATACTAAAACAAAAAAGTATACAAATTAATGTAAGAAATGAGACTTAAGAAAATGATACACATAAACATATAACAAATGGAAGATATAAAAAAAGACAAAATAACATGGCTCCAGTATAATACCGGAGCCATGTTATTCGAAAAATTAATAAATTGATTTTTTATTCCACTTTCGAGGATAAATACAATCTCGAGCCTTTATTTTATTTAAGTATATTTATTAAACTATTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAAAACCTAATTCCATAAAATGGAATTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 50716-50194 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGA01000004.1 Thermosipho sp. 1244 contig_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 50715 30 100.0 40 .............................. TCTGATTTTACTTTGGTTTAGGGTATGTTGTTTTTGCCGA 50645 30 100.0 44 .............................. AGTTGTAACTCTCGCGACCTTTCCTGAAGGTGCAAAAGTTTTTT 50571 30 100.0 42 .............................. TCTAATAAAGCGAACAAACGTTCAACATAAACAAATTCATCT 50499 30 100.0 40 .............................. TTTATAATCCTTTTTTCAATATTTTTTCTTGCCATAATAT 50429 30 100.0 35 .............................. CAATTGCTACCATTCCAATGTATATACCCTATATC 50364 30 100.0 39 .............................. CGAAAAAAATTCTTTCGTCACTTTTTAGAACTCTTATCA 50295 30 100.0 42 .............................. TACTTAGCCCCTCGGTTTCATATTCGCTATCTCTATCTCTTG 50223 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 8 30 100.0 40 GTTTAGAACATACCTATGAGGAATGGAAAC # Left flank : TTAATAAAATATCGATTGTAACTAATTGTAACGTTTGGGTTAAGGTGAAAAATATAAGGAATATTCGATGACCTTTTCCGTTAACAAAAAAAGCTTGTATATGGCTTAAAATAACGTGTTTACTTTAAGGTAACTTCCGGTTAATCAAAACGAAAATAATGTGGTTTATAATAATTTATGAGGTTCTTAATT # Right flank : CTATTTTTACTTCTTTTTATCTTTGTGTTTGTTTAAAAATAAAAGGAGAGATGATATAATCTCCCCAGATTTGAGAATAGCATACAAGAAAACTCATAAAATATGAATTTGTTATGTTTTCTGGAATTTATACATAAAATTTTTTATTTATTTTTAAAAGAAGTATTTTATTATGTTTTTGCATCTATCTTTTGTTTTTGAATTAATCCTTTCCTATTTTTTAAACAACCCCAAAAAAATAACATAAACCATAAAATTTTACAATAAAAAGAGATACAAAAAACTAAACAGCATGGTCTGGTGAAGTACCGAAACCATGCTGTTTGATAAATTAATAAATTGATTTTTTATTTATTCCACTTTCGAAAGTAAATCTAAAATTGTAGGTTATTTTAATATGTGTCTTAAAAATTCTTTTGTCCTCTGATTTTTTGGCTCTTTGAAAAATTCTTCTGGCTTTCCTTCTTCTGATATTACTCCTTTATCCATAAAGATTATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACATACCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 48570-47213 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGA01000030.1 Thermosipho sp. 1244 contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 48569 30 100.0 35 .............................. TTGCTTGTCATCATGGTGCCGCAGGTGGAAGATTC 48504 30 100.0 36 .............................. GACAAAGCTGGTGATTGGCTTATAGAAGTAGGTCAA 48438 30 100.0 36 .............................. AAGTTTTAGAAGAGAAAGTCAAAAAATACAAGAAGG 48372 30 100.0 38 .............................. TTGATTTTTTACGACAGAACTTTGATAAGAAAACAGCT 48304 30 100.0 35 .............................. TAGATTACCGATATTGTACATATCAGCTGATTTAA 48239 30 100.0 37 .............................. TCGATACCCCATGATATACCCTATCCCATACCCTATG 48172 30 100.0 36 .............................. TGTTTTCTAAATTCTTTTTCAAAGATTTGTTTAATT 48106 30 100.0 36 .............................. GTATCACAGTAGTAGACTTCATATCCTTTTTTCGTT 48040 30 100.0 37 .............................. ACATTTTGGTGAGCAAATTTTAAGTGATTGGGAATTA 47973 30 100.0 36 .............................. TTGTTAAAAATGCTAAGCATGTTATAAATTTGAATG 47907 30 100.0 36 .............................. TTGGGAAACCATAACCACTATGAACCCCACGGCGTT 47841 30 100.0 36 .............................. AACAAAACACTCAAGATGTCAGACAAATTATTAAAA 47775 30 100.0 37 .............................. TTTTTGAACATCCTATATTATTTGAGTTAATTGTATT 47708 30 100.0 37 .............................. TAAAAAAACAGAAAATTCCTTTCGCTGTGTGTCCTGA 47641 30 100.0 36 .............................. TCAACACTAAGTTTAATAGGCTATCGATACCCTATC 47575 30 100.0 38 .............................. TCAATTTTGTCTTTTTTGTTGTTTCTTCTAAATTTTTT 47507 30 100.0 36 .............................. TAGTTTCAAAAGTTGTATTAGATGCAGCTAAACAAG 47441 30 100.0 36 .............................. TAAATACTATGTTTGTAACCACCCTCGTAATTCGAC 47375 30 100.0 37 .............................. TTAAGAATGCAGTCATAATTTCACCCCTTTCTTACTA 47308 30 100.0 36 .............................. GAACAAGAGTAACAGACGGCGATAAATTAATTTCAG 47242 30 96.7 0 .....................A........ | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 99.8 36 GTTTGCATCCTACCTATGAGGGATTGAAAC # Left flank : ATTAGAAGGTGAAATTATGTATATTATTATGGTTTATGATATAGGAGAAAAAAGAGTTTCAAAAATTCTTAAGATAGCAAGAAAATATTTGAACTGGATTCAGAATTCTGTTTTTGAGGGAATTTTAACAAAATCTCAGTTTGAAAAGTTAAAGTACGAAGTGAATAATATTATTAATGAAAAGGAAGATTGTGTAATATATTTTATTCTAAAAGATTTTTCTTTTGTAAAGAAAGAAACACAAGGTATTCCAAAGATAGAAAATAGTAATTTTTTATAGATTATCACTCGTAAATTACATAAAAAATTACTATATTTTTTTTGAAAAAACCATAGATAAGGAGAAAATATAGGGGGTTTTTGAGAATTACATGAATTTAAAATAAACATTAATCTATGAGGTTAAACGCCAAATTTTTGATATAAAAATAATGGAAGAACCAAAAAAAGATTAATTTGAAAAAATACTAAAAATGTTGTAAAATAAATGTGTGTTAAGG # Right flank : ATGTATATAGGTTGCATGTTTTGGCCATCATTCCTATTGTTTTATTTGTGTACATTTCCATTTATTTTATTACTTTTAAAATGATAAAAATAGATTGGCAATTTGTTAAGTGAAACCTATTTTTTCCAGAATATACGAAGTCATATAAAGTTCTACAAAGAAAAATAGAATATCCCAATCAATACTTTTCTGACATCTTCATATTCATTGGAAGACTTAATTATTAATATTGAACTGTCTATTGATTTGATTTTTAAATATTTTTTAGAGATTTCTCATCAACTTTTAGGTGTTTTTTAAAATATAATAGAACCCCCATAAAAGCTAAAATTGAAATAGGTCTCATTACTTTAATAAAATCGTTGAATGAATAACCGCTAATTGATTCTATTACAAGATTTAGAGGACTTCCTATTAGTGTAGCAAAACCACCTATGTTATCCATTAGAATAATAAGCATAATTAATGGGATTGGATTAAGTTCTAACATATCAGAAATT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCATCCTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 70889-70322 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGA01000030.1 Thermosipho sp. 1244 contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 70888 30 100.0 35 .............................. TATTACGTTTTCGTAGCCGTAACTTCTGTAAACTG 70823 30 100.0 35 .............................. AAATTGCGATATCAGCTCTTGTATCTGCGTTTTTG 70758 30 100.0 35 .............................. ATGTTCTTAGGGAACAAGGAATTGAGGTGGTAACA 70693 30 100.0 41 .............................. TTGCCTTCGTTTTTTACAACTTTTAATTTTAACATATTAAC 70622 30 100.0 40 .............................. TCAACTATTGTTTCGTTTACAAATATTGGCAGATATGTTA 70552 30 100.0 35 .............................. TTCTTATCCCTCCTTTCTTTTTTTGTTCACATCTT 70487 30 100.0 36 .............................. TTGCTAAACCAACGTTGTTGTCTTTGTTTAATGTTG 70421 30 100.0 40 .............................. CGGAGGATTCTTGTTGCTCTTGGGTAGGAGTTAAATTCGA 70351 30 90.0 0 ..........................G.TA | ========== ====== ====== ====== ============================== ========================================= ================== 9 30 98.9 37 GTTTAGAACATACCTATGAGGAATGGAAAC # Left flank : TGTCTTTTAACAATAATGTTTTTCATTATTTTTAATAATATTAAGTTTAATTTTCTATAGTTAATCATGTGTTTTATTTATGTGAAGAATATATAGTTAAATTATTATAATATCATAATTATGTTATTTTATATCAAATAGTGTATTTTCTTTTATTAAATAGAAAATATCATTCATTATGAATAAAACATAAAATTACGTAATATAAAATAAAATAATATTTAATATAATTTGTGAATTATAAACAAATTAAAATAAATTAACTAATAGGTTTTCCGTTTACATAAATTCATACAAAATACCTTGTTTAATAAAATATCGATTGTAACTAATTGTAACGTTTGGGTTAAGGTGAAAAATATAAGGAATATTCGATGACCTTTTCCGTTAACAAAAAAAGCTTGTATATGGCTTAAAATAACGTGTTTACTTTCGAGTAACTTCCAGTTAATCAAAACGAAAATAATGTGGTTTATAATAATTTATGAGGTTCTTAATTG # Right flank : TAAAATTTTTATTTGAAAAATTTTTTTATTTTGTCAGATTTTTTTGTTTTAGATCGTAATTATAAATGAAAGAAGAATTAATTTGGAGGGAATTTTATGTATGTTATTATGATTTACGATGTTAATAGAAAAAGGGTTTCAAAAGTTTTAAGAATTGCTAGAAAATATTTACGTTGGGTACAAAGATCTGTTTTTGAGGGTAGAATAACAGAGAAAGATTTTAATGAATTGAGAATGGAAATACAGAACATAATTGTTGAAAATGAGGATAGTATATATTGGTATATTTTAAAAAAAGAATTTGTTCCTTATAGGCACTATATTGGTGAACCCAAATCAACAATTTCCAGTATTATATAGGGGGGAATTTATGGAAACATTATATATTTTTACCGATGGTGAAATCAGAAAAAAAAATAATGCAATGTATTTGGTTCCAAAGTCTAAAGAAAAAAAGCCAATGATTGTTCCATTAAAAAATGTTAGTTCTATTATGATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACATACCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1241-447 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGA01000007.1 Thermosipho sp. 1244 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 1240 30 100.0 40 .............................. TTTTTTGTGGGATTGCCCATGCCATAGGGTATCGTATAGG 1170 30 100.0 36 .............................. ATTTAAATACTTCTCTGGCTTCATCATCATTTCTAA 1104 30 100.0 40 .............................. AGTGCGTTAGGGCTGGCTAAAAACAGCTCGCTTGTGAGCA 1034 30 100.0 39 .............................. TCGTCTCTAGACGTGCGTACAACCTTTCCGTTTATAATC 965 30 100.0 42 .............................. ATTGTACAAGTATCATCATTCATGTTTACATCAAAGTTTCCT 893 30 100.0 36 .............................. GGCTTTAATGGGGACCCATCTGCCCCAGCGACAATT 827 30 100.0 43 .............................. CCGTGAAATGAGGCCTTTATTATTCAGGAGCTCAAATTCATCA 754 30 100.0 42 .............................. CATTCTCACGCATACCATGAACCAGTTGTAAAGGCAATGTGT 682 30 100.0 39 .............................. TACACATTTTCGCTTCTTCCGCAGCTTTCTTAGTAAAAA 613 30 100.0 35 .............................. TTTACTCATTCTTCCACCAGCCCTTATTGTCTTAA 548 30 100.0 42 .............................. CCTCTAGAGGTGCGCTCATACCTAAGCATCTCCAAAGTTTCA 476 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 12 30 100.0 40 GTTTAGAACATACCTATGAGGAATGGAAAC # Left flank : CGTTAACAAAAAAAGCTTGTATATGGCTTAAAATAACGTGTTTACTTTAAGGTAACTTCCAGTTAATCAAAACGAAAATAATGTGGTTTATAATAATTTATGAGGTTCTTAATT # Right flank : CTTCATTGTGTGTGTGTACAAAAATCAAAGAAAATTATTAAAAAATCAAGCACAGAATAGAACAGATAATAGGAATAGTGAAAAAACATATTTGGAGATAGAACTTTTTTATTTAAAATACCCAAACTGCGTGTATATGTAAGAATTATATTGTACAACTTGATAGAGTTATTCCAAATAATTTTTTATTTAATTTTGTGCAAGACACTTTATTATTCGAATGTATTTAGTTCATATCTCTATATGACTATTTGTTTTATATCGTTTTTTGGAGAGACTCATTAAAATTAATGAGTCTGTTTCAAAAATAGTAAGAGACTAATCCGAAATCAAAAAATAGATACAAAAATATAATAAAATACTTTTGAATTACCTTTGAATAACCTTTTCTAACAATAAACAAAAAAATTGCTACATACAAATTGTAGATTAAGAACTTTAATAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACATACCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //