Array 1 756914-765733 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTS01000002.1 Prevotella multisaccharivorax DSM 17128 strain JCM 12954 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 756914 30 100.0 34 .............................. CGAGAAGCTCCATAAGGCTATCAAGACAAAACAG 756978 30 100.0 37 .............................. GTGGTTCCTAACTCGGAAGAGTGGTACGACCAACAGA 757045 30 100.0 35 .............................. AGTGGTTACTAGGTGATTATCAGCGTCAATTGCTT 757110 30 100.0 35 .............................. GTTGATTGATGATGATGTTGATTTTCGCGTTGTAG 757175 30 100.0 37 .............................. GAAGCAGAAGAAGAACCTATTTTTCCGGGTTTCATAT 757242 30 100.0 34 .............................. CGAGAAATCGCAGAAGCAGTCAAATCAACAGAAT 757306 30 100.0 36 .............................. GCATCAGGAACAGTGAAACCAAAATGCGCAGAGACC 757372 30 100.0 38 .............................. AAGGAAGTTTCTTTAACAACGCGGGAATTACAATCAAC 757440 30 100.0 35 .............................. TGAGGTTGCGCTGAAGCTCTTTTACGCTCTGGGAA 757505 30 100.0 37 .............................. TAGCTTGTGCAGTAGCAAGAACACCTTGCTTTTGAAG 757572 30 100.0 34 .............................. AGAGCCTGCTGCGTAGAAACAGCAGCATTCTGAA 757636 30 100.0 38 .............................. TAATATATATATATACATAAGTCTCTCGAAACAAAAAA 757704 30 100.0 35 .............................. TACGCTGGCGCATGACGGTAGTCAGCTTCGTCTGA 757769 30 100.0 36 .............................. TAGGTCGCTACTTGCCCTTTTTTTTTGAATCATCCG 757835 30 100.0 34 .............................. CTCAGTACCGTCTGCACAGGCTCGCCGGCTGACA 757899 30 100.0 34 .............................. ATCAGGTGCTTTTGCTCCTCGACGGACGGATTGA 757963 30 100.0 34 .............................. TGATCAGCCAGCGGCTCTCAACGACCATCCCCGT 758027 30 100.0 34 .............................. CCCTTAATAGTTGTTCGGTTCGTGTTAATGATAA 758091 30 100.0 34 .............................. GCTCCTGCGGCTGGTGGCTCTGCTGCACCTCCGT 758155 30 100.0 36 .............................. ACGTGCATATCTACTCCGAGTGTCTCACAAGTTCGG 758221 30 100.0 35 .............................. CGATGAATCTGACCGCGAATGTGTCGACATCGATG 758286 30 100.0 34 .............................. TGGTGACACGGAGCGTGTCGATGCACTCCAACGT 758350 30 100.0 34 .............................. CCGTGAGAGAATGAGGGGTGATGTCATCACGGGT 758414 30 100.0 36 .............................. AAATGCGCAGAAATCTGAGACTTATAATCAGACTTA 758480 30 100.0 34 .............................. AAATGAGTTAGAACGAAGCGAGTATCAACGAGCA 758544 30 100.0 34 .............................. TTCGACGATTAGTCAAAGCAGAATACTGTTGAAC 758608 30 100.0 34 .............................. TAACGATTAGACAAAACTGTAGAAGCGTACTGAG 758672 30 100.0 34 .............................. GATTGTCTGTGATGGATTCGTTAAGAATCCGTCT 758736 30 100.0 38 .............................. AGGTTTGCTTGCAGGTAAAGGTGTGATTAACGGTAATG 758804 30 100.0 37 .............................. ACTGCTTCTACTGATTCTTTTAATAATCAGTCGTTTC 758871 30 100.0 34 .............................. ACGCGATGATGAGTGTATCGGCTACGGCAAGCAA 758935 30 100.0 34 .............................. TCGCGATATTGTAGAGGATAACCTTGTTTGCAAC 758999 30 100.0 35 .............................. TTGAGCGCGTCTGCGATAGCCTTCCATTCGGCGGG 759064 30 100.0 38 .............................. GGAGGAGAATGACTGGTTCGGTGCAACAGGGTTGGATA 759132 30 100.0 34 .............................. CAGTATCAAGTGACGGCACTATCTCCTATACTTC 759196 30 100.0 34 .............................. AGGCTACCGATGCGAGCAACTCCGTGGTATCCGA 759260 30 100.0 34 .............................. AAAGCATCAATACGTGCTCCCTCACAACAGGCAA 759324 30 100.0 35 .............................. AATGGTTTTCAAGAAAACCAAAAAAACCAAATGGT 759389 30 100.0 34 .............................. ACACGGGAAAGTATTCTGCTGCGACCAACACGGG 759453 30 100.0 35 .............................. TAAGGTGTTGCTCTCCGTTGCGGGCGAAGTAGACG 759518 30 100.0 37 .............................. GTGGTTGTTAGGTGATTATCAGCGTCAATTATTGCTT 759585 30 100.0 34 .............................. TGCGAGGAATGGACAAACTGGTGAACATTATCAA 759649 30 100.0 35 .............................. GCCCTCATCACGCGTACAGTCATCGACACGGCGGT 759714 30 100.0 36 .............................. AAATTCCACCCCTCACCTCCAAGTAGGACTGGGTGA 759780 30 100.0 37 .............................. GAAGCCTTATCAGGGCAGGGGCGGAGGTGGTTCTTCA 759847 30 100.0 36 .............................. GGTTAAGAAGGCGCAGATGGCCTTTGCCAGTATAGA 759913 30 100.0 34 .............................. GGAGGTCATCAGGCAGCAGCAGGCGATGATGAAG 759977 30 100.0 37 .............................. ATAGATATGGACGGTATGATTGCTGGAGGAACGGATG 760044 30 100.0 34 .............................. ACGGAAACGTGACAACAGAAGTCACGCACATGGC 760108 30 100.0 35 .............................. TCTAAACGACAGTTTAAGCGAGGTGTTTCCCACCC 760173 30 100.0 36 .............................. ACTGAATCATGTGCTCTCGGTTCTGTTTCGTTGTCT 760239 30 100.0 35 .............................. GAAGAAGAAAATTTAGGACTACGAAGCGTACGTTC 760304 30 100.0 34 .............................. AGTCATGGAGACGTCATTCGAGGTGGAGAAGGTA 760368 30 100.0 35 .............................. TGGTGAGTCATAGCCGCTGCGGTAAGACTGTGAGA 760433 30 100.0 35 .............................. TTTGGTCGGTGAAGTTCAGATGTGCTCCGCTCTGT 760498 30 100.0 35 .............................. CATGGAAGGATCAGCACAAGCGAAGATGGAAGAAA 760563 30 100.0 35 .............................. CTGTTATGTTCGTCTAACGATGGCAAAGTTAGTAT 760628 30 100.0 35 .............................. AGCAAGTCCTGAAGCGGAAGTAGAACCTATCTTGC 760693 30 100.0 36 .............................. ATAACTTCATTGACTATGTAAATAAGGGCATTGACA 760759 30 100.0 34 .............................. AAAAAAGAAGAGGTAGATAAGGACGGCATACCTT 760823 30 100.0 35 .............................. CTGCGCGTCCGACTGTCCTTTTATACCTTTAATCT 760888 30 100.0 36 .............................. CTACAGACAATCTGAGAAGCATCATCATAAACGCAA 760954 30 100.0 36 .............................. AAATGCGCAGAAATCTGAGATTTATAATCACTTTTA 761020 30 100.0 34 .............................. CTCAAAACAGAAGAAGCATACTGAGAGATACCAG 761084 30 100.0 36 .............................. ACTATCAGCATTCAAATAAGCATCATGAATCTGAGA 761150 30 100.0 35 .............................. TTCGCATATACCAAATTCGGATTCAGGCCAGCAGC 761215 30 100.0 34 .............................. TTGCGCATCCGACTGTCCTTTAATACCTCTAATC 761279 30 100.0 35 .............................. TGCGAGATGACATAAAGATGACACCTTTGAGAAGG 761344 30 100.0 35 .............................. TTGTGCATCCGACTGTCCTTTAATACCTCTAATCT 761409 30 100.0 37 .............................. GTTGTACACGCTTATCGAGTCCAGTCTCGGCTCGTAG 761476 30 100.0 36 .............................. AAGATTCAATTGTAAAGCATGAAGACGGCACGTGGA 761542 30 100.0 36 .............................. GCAGATAGTCCGTGAAATTCTGATAGAAGTATTTGA 761608 30 100.0 34 .............................. TACAGGCGTACGCATTACTGGATCGTGTTGCTTT 761672 30 100.0 34 .............................. TCCCGTTCGTCCCGCCGTTGATGGCTTTCGTCAG 761736 30 100.0 36 .............................. GGCCGTTAAGTCAATGTCACCCCCCAAAAAATTGTG 761802 30 100.0 34 .............................. ATAGATTTTGACATTTTTTCCTGATATTCAGCAT 761866 30 100.0 35 .............................. AGATGAGACGATAAAACAGTAGAAGCATACTGCGA 761931 30 100.0 34 .............................. TTGATATACCTCTGCGGCTTCTTGCCTGAAGGCG 761995 30 100.0 35 .............................. GAAGGATGGTCGAAGACCTTCTGGTCTATCATAAT 762060 30 100.0 36 .............................. GTCGTAGCTTCTTTCCTTCGCCCTCATCCATGCCGT 762126 30 100.0 34 .............................. ATCTTGACGATCGTGACATCCTGGTTATGACGGA 762190 30 100.0 35 .............................. TACGGAGCCCGGCGAGCATATCGATGCACTTGCAA 762255 30 100.0 34 .............................. TACTGATGAATAAATAAAGCTGATTCATTATCAT 762319 30 100.0 37 .............................. TACGTGTGAGCTTGTCAAGTACTTGCGGCATATATCT 762386 30 100.0 34 .............................. TTTCAAGTACCATCCTCCACACTTCGGGCTCTAC 762450 30 100.0 35 .............................. CATCATGAAGCACGACAGGGGTGACTTCATGATGT 762515 30 100.0 35 .............................. TGCTGTTGTTGAGGGAGCTGATGTCGTCATCCAGC 762580 30 100.0 34 .............................. GGCCATCACGGGGCAGAAGAAGAACGGCAAGAGC 762644 30 96.7 34 ...............C.............. GTGTGCATCTGGAAGACGAAGAGGTCGCGTGCCT 762708 30 100.0 34 .............................. AAATTTATCCGGTGACCATCATCGTCATCATCAT 762772 30 100.0 34 .............................. CTCGTACTGCTGATGATCGTGTAAAAGGTATTAA 762836 30 100.0 36 .............................. TCGTACGGGAGGTGAAGGCGGGCGTGGCAGAAGCCA 762902 30 100.0 34 .............................. GGCCATCACGGGGCAGAAGAAGAACGGCAAGAGC 762966 30 96.7 35 A............................. TGAGGCAATACGGAAGGAGTTCGAAGACTGCAACA 763031 30 100.0 36 .............................. ACTCTTCCTGGCCTCAGCCCCGCCCTGCACGAGTTT 763097 30 100.0 35 .............................. CGCCGAGGTATTTGTCTGGAGTGTTTTTCAGCGTC 763162 30 100.0 34 .............................. GACAAATCTCACCATCTGGGGTAAGGCGGTGTTT 763226 30 100.0 36 .............................. ATGAAAATCACTTCGGGGTATCGGTGCCTTGAGCTT 763292 30 100.0 35 .............................. CAGGATATCGGCGCGTAGGGGAGAGCGCGGCGGTG 763357 30 100.0 36 .............................. TATTGCACGAAACGCGCACGCGGCAGCCATGAAAGG 763423 30 100.0 37 .............................. TCATGCGCAGGAACCTCGATATATGCGTATATCGATA 763490 30 100.0 34 .............................. TCTAAAAAACCCCGTCTACCCCCCCGCAGATCCT 763554 30 100.0 34 .............................. TTTAAAGGAGGCATATTGCACGGACGGAATCAAC 763618 30 100.0 34 .............................. GGAATAACGATTTTGTTCGCCGATGCATAGAACC 763682 30 100.0 34 .............................. CGAAGCCGTAGGCGAGCGCCAACGGGGGCGGAGT 763746 30 100.0 34 .............................. ATTGAGACCGAGATAAGCAAGTTCTTTGCAACGG 763810 30 100.0 34 .............................. TAAGGAGTTGTAATTACATGCAATATGTCATTTT 763874 30 100.0 35 .............................. GGACAAGCAGGAATACAAGCAGGATATCTTCTACA 763939 30 100.0 35 .............................. GAATCTGGTCAAAGAACAAAGACAATGCGGTGTCT 764004 30 100.0 35 .............................. ATACACTGTATTAAGCATAAGCCCGCAATCGTCGA 764069 30 100.0 38 .............................. GAGTGTGTCACGCTTCTTCATCAGCTCTGCCTTCTTCT 764137 30 100.0 34 .............................. AAAAGAAGGTCATACACTGCCAGTGAAGCCACCT 764201 30 100.0 34 .............................. AAAATTAAAAGTGTCGAATTTTTAATTTTATTCA 764265 30 100.0 35 .............................. TCCCATGCTCGAAGAGGGCGAGGAATACAACGGCT 764330 30 100.0 38 .............................. GCGAAACAAAGATCATCGTCCGGATTAAACTTGGACCA 764398 30 96.7 35 ............T................. AGGGTTTCAACTACGTGAAGCTGTCGGACCTTTAT 764463 30 100.0 34 .............................. ACTTTAGATACTCTTTGGCTGTATCCTGACATGT 764527 30 100.0 37 .............................. TGCGACATTTGCGCCCCAGCTGCTCGGCTGCTATCAG 764594 30 100.0 34 .............................. CTGTTTATGCTTCACAGTGACAAACTGTTCAGAA 764658 30 100.0 35 .............................. AGGAAGGAAGAGGTAGATAAGGACGGCATACCTTT 764723 30 100.0 36 .............................. TCTTGTGATAATCATTTTTCTTATTCGCAAAAATAA 764789 30 100.0 34 .............................. TATTATTATGATACTATCAATATTCTACTGTTAT 764853 30 100.0 35 .............................. TTGGCTCACGCCCCATGTCCTCTATCCCCAGCATG 764918 30 100.0 37 .............................. TGAAGCGCAGCCTCACGGAAGGATGAAGAAAGGCTCA 764985 30 100.0 38 .............................. AACGGCGGAGCGGAGGCGGCGGCGAAGCGCCCGCAGCC 765053 30 100.0 35 .............................. GTAGTCATGCGGCAGGATATCGGCGCGTAGGCAAA 765118 30 100.0 34 .............................. ATGCTACTTTTAAATTTGTGTTTTTCACTTCTCT 765182 30 100.0 36 .............................. GAGTTTGATAGTTTAGGTTTTGAGCCTGTTAGGTTG 765248 30 100.0 34 .............................. TACTCACCGACAGCGAAATACTTGAAATTACTCG 765312 30 100.0 35 .............................. TAGCTCTCAAGCTCCTCAGAACGCAATCCAGCACT 765377 30 100.0 36 .............................. ATCAATATCACAAAGACGCTTGGAAGTGGAGAAATG 765443 30 100.0 35 .............................. GAGCCCATACAGGTATCAAAAAGAATAGCTGTAAC 765508 30 100.0 36 .............................. TGTTGAGAGAAGCGCCTTTACGCAAGAGCAGTAAGG 765574 30 100.0 35 .............................. AAGGGTGAGGGGTGATTACATAGATAAACAACAAA 765639 30 100.0 35 .............................. TTGATATGATTGATAATTTATACATTAACGAGTTT 765704 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 136 30 99.9 35 GTTTTAATCGCACCTTTATGGAATTGAAAC # Left flank : GTTTAGAATGTACTGGTAGCTTATGTATGTGATATTGGTCTATGATGTCGGTCAGAAGCGGGTCGCCAAGATGCTTAAGCTCTGCCGGCAGTATCTGTCTTGGATACAGAACTCGGTCTTTGAAGGAGAGATCTCCGAGCCGAAGCTCCGTGAGCTTAAAGCCAAGATCCAAGACATCTATGAGCCGAGGGAGGACAGTGTGATCGTTTTTTCCAATAAGATGAGCTATAACATGGATAAGAAGATCCTTGGTAAGGAGCGCATGTCAACTGATAACTTCCTCTGAAAGTTGTCGATGTAGGTCTCAGCCGTCTCCTTATTTACTTCAACGACACACCAAAATGCTCTTTGACATGTTGAAACAATAGTAGATAAAGGGAGTTGTCGTAGACCGCCTTTCCTAATATTTTCTCACATCGACATGTTTTTTTGTCATTTTTCTGTATCTTTGCACTCACAAACCCCAGTAAACAGTGACCTTCGTCTTCTTGTCGATGTGG # Right flank : CGGAACAGGAAGAGAATGCCAAGGCACTCTTTCATGGGTTTTAATGGCTCAGTACCAATAGTCCGTGGATAGATTAACTTTATTATCCGAAGATCGTTGCAACTCTGTACATGAAGAAAGGAAGGTCTTGTATACCTCTGACTTGTGCTCTGAAGCCCTTCGTCTTTGAGTTGAGGGACTCTGCAGAAGCATTGGTCGATCTGTTGTTAAAGTAGTTAAGAACTTCCTCCTCTCTGTACTTGATAGCATCCCTGGCTACTTTGATCTCACGCAGGTTGGAGTTAGCTACACGCTGATACCACTCATGCAGTTTCACTCTTGCAGTCTCCTTGTTAAGGCTCTTATCTCTGAAGATAGCTCTAAGACTGCACACATGTCCGTATGCTTCCTTTATCTTCGGATGCATGTCGAACAGCAGGTTGGCTCTTTCCCTTTGCTTCTCGCCCCATTTGTCACCGCTTTGCATAAGTAGGTACCGGCTCCTCGTAAGCAGTTCTACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGCACCTTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 767372-768048 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTS01000002.1 Prevotella multisaccharivorax DSM 17128 strain JCM 12954 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 767372 30 100.0 36 .............................. TGAGAAGCTGAACGGTACCGACATCAAGACATTCAG 767438 30 100.0 34 .............................. AGGACACCCGCACCCCGAAACAAAAGGAGGCGTT 767502 30 100.0 35 .............................. CCATCAAATTATCACAATATACGGGGTATGAGTTT 767567 30 100.0 34 .............................. CACAACAGGCAAGTGAGTTGCCCACTGACTGAAA 767631 30 100.0 34 .............................. TGAAGAAGTGCTACATCGATACAGCCGACACGGG 767695 30 100.0 36 .............................. TACAACCAAATTCAAGCAAAACAACCATTTGCTTGT 767761 30 100.0 36 .............................. TACATAGAGGTAAGCATAGAGCGAGGTCGATGTGGA 767827 30 100.0 34 .............................. AGAGGTAGCATCGTGGTACAAAGGAGGCTTACCG 767891 30 100.0 34 .............................. AGCCCGACTACTCAATCAAGTAATGAGGATTTTC 767955 30 100.0 34 .............................. TAAGTCGCTGATACGTGATGCCAACCGCATACAT 768019 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 100.0 35 GTTTTAATCGCACCTTTATGGAATTGAAAC # Left flank : GTGACCGGGTACGTATCCAAATATTTTTTTTAAGACATCAGCGAACTCCTTCGAGTAGCTGGTGCCGTTGGCAACTAAATCATAGCGATTAAGAACTACATTATGGCCTTCACTGTCTATCCATCGGCGACGTCGCACATGCAGGATGACCTTGCGGTCACGTACAGGGAAGTCTGTCACTTCACGGCTCTCTGTGAATCCGTTAGGCTTAAGGTCATGCCACTCATCAGAGCGTGTATCTCGCTCATCAAGATAGATGTGGAGCTTGATCTTCTCTGCTCCGGTCTCTGCATATTTACCTGTATGCTCTTCGCTGACGTCTGTCACGTCAAAGAAATCCAAGATACCATCTGGAAGCAGAAAGCTAGCCAGAGTCTTATAGTCGAATGTAGAAGTCTTCTTTCCCATGAGTGCAAAGGTAATGCTTTCTCATTGCATTCATCACACAGACAGACAAGAAAAAACAGGCTAACTCGGCAGCAGAGGCTCAGACAAAGCTG # Right flank : CTTGCTACGCTTCGTGAGTTCTTTAACCCAACTTGCAGCTTTTAGCCCATATGTCCGGCAAGACTCTTAAACTTTGTCAACAAAATCACTATTTTGACCGATATTTGCCCGATTTTCCGCTCTTTTGGACTGTTTCCCTCGTAAAAAATATTAAGCGATTCGTTACCCCCCTAAAATGTGTGGTACATCGGGTGTTGCATGGTGCCAAGATTTTACCTAACTTTGCACCGATGTATATCAAGGTCCAAACAAGAACAAAAGTCGGTACCGACGGGAAGAAGCATTCCTTCGTTTACCCGAGGCTGTACGAGTCTTACCGTGATTGTGACGGTAAGATTCGCCAGCATTATCTCATACCGCTTGATCTTGACGATCTTCCGTCCTGGAAAGATCGCTATGCCATGTGTCATGTCCTTAATGACATGGTAGTCAATGGTCCTTCTCTCCATCTCAATGAGACTCCAGTCACCTGTAAGGCCAGAGAGGTTTACGGTCAGCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGCACCTTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 3 881671-882795 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTS01000002.1 Prevotella multisaccharivorax DSM 17128 strain JCM 12954 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 881671 37 100.0 36 ..................................... TGTAAAAAGTTCCTTAAGAAGTTTTATAGCGGTTGG 881744 37 100.0 35 ..................................... AAAGTACAAGCAGTTGATTCAGATTCAGTAGCTGC 881816 37 100.0 35 ..................................... ATTGTTGACGAGCTCGAAAGTATGAGCTTGCTCAA 881888 37 100.0 35 ..................................... ACGGGCAAGAATATGAAGTTGAAAAAATTTTATCT 881960 37 100.0 36 ..................................... ACCTAGCCGATACGGCGTATACAGCCGATGTAGAAT 882033 37 100.0 33 ..................................... ATTATTTCAAGCCAGAGTACTGCCATTACAGTA 882103 37 100.0 39 ..................................... TTCAAACTCCACACCCTCTGCCACGGACATCGGAATGCC 882179 37 100.0 35 ..................................... ACTACGAGGAGTATGATATAACACACCAATATTTC 882251 37 100.0 35 ..................................... GACTACACAAGCGTAGCATATCAGGCTGACGTAGT 882323 37 100.0 36 ..................................... AGGAGGACAAAGCCGAGTAGTCTTCACAGACAGGAT 882396 37 100.0 33 ..................................... GCAGCCGATAAAAATATATGTTCAACGAAAAAC 882466 37 100.0 36 ..................................... CACAGAACAGTTTCACAATCACAGGTTTCGTCGGTG 882539 37 100.0 36 ..................................... ACTTCGACATCCATCTGACGGCTACAGCCATCGAGA 882612 37 100.0 34 ..................................... GATGATAAATTTTACAGAAAACAAAGAGAGCAAC 882683 37 100.0 39 ..................................... TGTAAAGGACTCTATTCGCTCGGGCAGCCGATAAAAATT 882759 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 16 37 100.0 36 GTCTTAATCCTTATTGTAATGGAAGATGCTCTTAGAG # Left flank : CGTACAACGTCCCACGATACTTGCAGGAACCAGGAAATGTCCTGGATCGTTGCAAAGCCTGACAGGTCAAGTACCATGTTCGCAAAGGCCTGTGTATGTCGACGTTTCCCCTTGGCAAAATCAATCTTCTCCTGCTGGATACACCCACAGTCATGGCATAAAACACGTTGTATATGCATGTCCAGATAAGTCTTGTTTAAGCCGATTGGCACACTTACAAAGCGACGAATGTGGCTGCCGTCAAGAACAACATGATGGCTGCCGCACGCTGGACAACAAAGTCTTTCCCTGGGTGTTTGGATTTCCAAAACTAATTCATTACCTTCGTAGCGCATATCCTGACATTCCTGTCGGGAGACGCCTAAGGCGTTTTGCATTATGCTGGTATTCATGTTCTTGGAGTTTGGGCACTACAAACAAAGATACATAATACCAGCTCTTTTAAATATATACAACAGCCTATCTATTCATTTAACGGAAGAACCGAGTTTTTCTGTTGT # Right flank : GGGCAGATATCAAAATTCCCAGATATACCTAACCCTTTGTCGCTGTTTATGTAGCAATATTTGACAAAGAGCTTGGAAAAGTGGGTTTTTCTAAACGGGTGCAAAGATACAAAGAATGTACAAGAAGTCAAAGAATGCGGAGTGAAAGAAACTTAAAAGAATAGTGTATTCCGGCTGCGAGTGATGATGTCTACATCGATATGCTGGCCAATGATGCTCATAGCCCTCAGCTGGTCTGTAGAGATGGGGCAGATGATGATGCTGTCATGATTGTCATAAAGAGACTGCACTTCGGCCAAATCACGCTTGATGGTGTCGAAAACGGTCTTGTCGAGATCGGCAAGAAAGATGGATCGCTGGATGCGTGTACATCCTTGGCGTTCGAGATACTTGGCGATATGGTATCGCACTTTGTTGCTCTCAATATCATACATGACAAGAAATAACATATTGGTGGCAGTTCGTGATGGACGGTTGACGATGCCCAACAGATGGTCGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTGTAATGGAAGATGCTCTTAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //