Array 1 678528-675869 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032683.1 Methanosarcina flavescens strain E03.2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 678527 37 100.0 36 ..................................... CATCTCGGACCTCGGAGCTATCAAGGAAATTGTTAG 678454 37 100.0 36 ..................................... AGAAACACGAAGCTTACCAAGAAATGATCCATAATT 678381 37 100.0 35 ..................................... ATTTCATGCTATTATATCTCCCTTGTAACTTACAA 678309 37 100.0 36 ..................................... CTCAGTCCACTAGGGACGGCGGGGAAGTCGTAAAAA 678236 37 100.0 37 ..................................... CTGAATTAACTGATGGGAAAAAAGACTTTACAGACTT 678162 37 100.0 35 ..................................... TGTTATATTTCGTATAACCAAACTAAAAAGGAAAA 678090 37 100.0 37 ..................................... CCGTAAACCTCTATATCTGACATGTCATAAGTATCGT 678016 37 100.0 36 ..................................... ATAATAGATTTTTCCGCTATCAGCAGTTAGTTAAGA 677943 37 100.0 36 ..................................... CTGAAAGTTGCAAGTGCGTTTGTCATATTTTGTCAG 677870 37 100.0 34 ..................................... ATATTTCGGACATGTGATCACCCCGTATTTCCTG 677799 37 100.0 36 ..................................... TATGGCTTTTCGATATATTCAATAAAGTTTCTTTTT 677726 37 100.0 37 ..................................... TAGTATCCTGGGCTCAGGTACTCGTTATACGGCTCAG 677652 37 100.0 37 ..................................... TATACGAGAGGACTCTGTTTCCCCTGCTGATTAACTG 677578 37 100.0 36 ..................................... CTACGTCAATTATACCTATCGCGGGACCATTACAGA 677505 37 100.0 37 ..................................... TAATGTCACTCTCACAAATTAAAAGGGACCTGTCCGG 677431 37 100.0 37 ..................................... AGAAGATCATAGCATCGAAAGGTGAGAACGCCGACCA 677357 37 100.0 34 ..................................... CTATTGAGTATGTTGAGCGCGTACTCAATGACAA 677286 37 100.0 36 ..................................... ATTTAGTGACCCCACCAACAATAGTGCCATGATTCC 677213 37 100.0 37 ..................................... TTTAATCTGGCATAACATTCTGCATATGCCCCACCCA 677139 37 100.0 36 ..................................... CGTGGTTCCAGTAGTTCATTTATTCCTCTACAGCCT 677066 37 100.0 35 ..................................... AATCGCTCTCAGATGCTCTAGGAATCGTTACAGAC 676994 37 100.0 35 ..................................... TTCTCATAAGGATTTGGTACAAAAGTGACGGCTGT 676922 37 100.0 34 ..................................... TTGTACCATTTCTAATGTACAATGAGAAAAGATC 676851 37 100.0 37 ..................................... CAGGACTTCAATGTTCTTGTGGGAATCATGTAAATGA 676777 37 100.0 37 ..................................... CAAACTTGATAAGGGCGCGCACTCCGTGTACACCCTT 676703 37 100.0 36 ..................................... CTACCGGCCCTATCGGCGAAGGGGATATAGTAAATA 676630 37 100.0 34 ..................................... TTACTTTCATTGGCTAGCTGAATACCGTTTTCTC 676559 37 100.0 36 ..................................... TCACCAATCTTCCGGGGTACATGTTGGTAGCATTTT 676486 37 100.0 36 ..................................... CCACACCACCCATTTTCTTTCATGTCTTCTACAATC 676413 37 100.0 35 ..................................... GTATTACGGTAGTCGTACCGGACGCACCTTTCGCA 676341 37 100.0 36 ..................................... AAATATCCCCATTATAGATTTGTCCCAAGCCCAGCA 676268 37 100.0 35 ..................................... ATCGCTATCCTGCAATGAGGCAGGATAGCATTGCA 676196 37 100.0 35 ..................................... TTATAAATAGTTGTTTTGCTATAACTAGGCTATAG 676124 37 100.0 36 ..................................... CCCCGTGTACAATACATACTATGCACGCAAAGTATA 676051 37 100.0 37 ..................................... TACAGAATACAAAGGAAAGAAGTATTTTGTGTATGAG 675977 37 100.0 35 ..................................... TAGACCGTGATATGTGGGTCGGAGATTTCCAGAGG 675905 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 37 37 100.0 36 ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC # Left flank : GAAAGCAATGTTTTTATTGCCTCAAAAAAACGCCATATAAAAGGAATTGTTGATGAAGTCCTGTTTCTGGAAGACGGAACCGCCGCTCCCCTTGAATACAAATTTGCCGAATACAAAGAGAAGGTCTTTAAAACCTATAAGTTTCAACTCGTCTTGCAGGCGCTTCTGATCCGGGAAAACTACAATATTGAAGTTAATCGCGCATATATTTGTTTTACACGCAGCAACAGCCTTGTCAAAGAAATAGAAATCACAACCTCTGATTTCAAAAAAGCCGAAAAGATTATACAGGAAATCCTTGATATAATTCAAAAAGGCTTATATCCAAAGACCTCTAGATCTTCTAGAAAGTGCGTAGATTGCTGTTACCGTAATATCTGCGTATGAAGAGGTTTTTCTTGTATTTATAAAGGGTTTGATAATATCCCAACAAGAAATTTAGTTTTAATATAGGGCTAATCTCAGGCTTTTTCTAGCCAAATAACGGAAAATTTTGCCCT # Right flank : CTAAGTAGGTTATTGATATTTGTTTTATTGTCATTACTTGCCGCAGAATATTCAAAAAAACAAAACCGTTAGGAATCATATTATCAAAACTTATACCATGTCTTCTTTTTTCATTTTTCGGCGGTATGCTTCCTTACATGCTCCAGAGCAATAGTTAAAATCAGACCTTAGAGGGATTGAAACTTGGGTCTATTTAGCTGAAGAAGGAACATATGTAAGGAAATAAGGATAGCAAATAATATATTAAAAATAAAAATAATATCAATAATAATAACAAATCATGGGGGTCTCGATTATAAGCACAGCAGAACTTATACTGGTCATATTAGTAATTCTTCTTTTTATTCTTATAATGACGCGGATATACAAGCTTATCAAACATCAGAAAGAATAAGTAAAACCGATAAATTATTTAGGAATGAAGAAAATATAGATTTCAAGAGTTCCACAGGCTCTATAGGAAACACACCTTTACAAAATCCTCTAAATTCTTCCTGCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 2 2065818-2059431 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032683.1 Methanosarcina flavescens strain E03.2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2065817 37 100.0 35 ..................................... GAGAAGTCTGACGGCTGATGTGTTGCTATCCACTG 2065745 37 100.0 36 ..................................... ACGGCTTTGACCTCCCTGCCCCCTTAATCCTTGATG 2065672 37 100.0 37 ..................................... TTTAATTTTTAGGATAAGTAGGAAGGTATATATACAA 2065598 37 100.0 37 ..................................... TGCTTTCTCAAAACGGGAAAGCGAGGAAATCCCACAG 2065524 37 100.0 32 ..................................... TAGTCAACAACATCCCCGTGTTTGTTGGCGAA 2065455 37 100.0 34 ..................................... CCGGAATTAATACAGTAGTGTTTTATAAAAAATC 2065384 37 100.0 36 ..................................... TATTAGATTTTCTAAGGGAGTCGCCTGTTATAATAA 2065311 37 100.0 34 ..................................... GTGGATCAGGGCAACCCTCTAAGGACTGATTAGA 2065240 37 100.0 35 ..................................... TTAAGGAACGGCTTCTCTCGACCACAACCGGCGAA 2065168 37 100.0 37 ..................................... CAACCATTGTTCAGGTCGCAACTGAGCGCACTTCTGA 2065094 37 100.0 36 ..................................... CTTTTGCAACTTCTACAGCCGCTTGGAGTACAGGAG 2065021 37 100.0 35 ..................................... ACCTTGTTCTGGTATTTTGCTTTCTTGCGATTCCT 2064949 37 100.0 34 ..................................... CCTCATTCCGGTACTACTGTACCAATTCCTTGTA 2064878 37 100.0 35 ..................................... CCCTGACAAACTCAAAGATTCCGGTACTCTGGAAG 2064806 37 100.0 36 ..................................... GTTAAGAGCACTCCTTACGCCAGCATTGGAATGCGA 2064733 37 100.0 37 ..................................... ATAAGTCGCTCTATAACTCCCTGATACGACTCTCTAG 2064659 37 100.0 36 ..................................... TTTTATTTTCGATTGTCGAAACTACTTCTTTCTCGC 2064586 37 100.0 36 ..................................... CTAAGTTCAAGACCTGAACTAAGTCTATACGGTGCT 2064513 37 100.0 35 ..................................... TTTTTCGAATGAACGCAAGTAATTTTGAGATACGA 2064441 37 100.0 37 ..................................... TCCGAACGCCCTTCAGCAGTTAATACATTCAATTCCG 2064367 37 100.0 36 ..................................... CATAACGATTTTACCGGATAAGGTAACAAAAAGAAA 2064294 37 100.0 38 ..................................... ATTGAAATTGTGAAAGAGTCCTGAAACGAGAAGCCCCG 2064219 37 100.0 36 ..................................... AGATAAGAGTCTACAGCATCTCGGCAGATTTGGGAA 2064146 37 100.0 37 ..................................... CTACAAATCCAAGTCTGATAGGCAAGTGTCTTTCCTT 2064072 37 100.0 35 ..................................... CAAACATTAAGGTAAATCCGTTTTTCTGCTCAAAG 2064000 37 100.0 37 ..................................... TTGTTGCAGGGTCTGCATCTGCATAACTATCTGCATT 2063926 37 100.0 35 ..................................... TGTCATTATTAAATCTGGACAGTCTTGGATGTTCT 2063854 37 100.0 36 ..................................... ACAGTCTTGCAGCTTCGCAGGTTGTACCTGATCCAG 2063781 37 100.0 36 ..................................... ATAGTTTTATTGCGATTTCAGTCGCCCTGTCGAGTG 2063708 37 100.0 36 ..................................... TGCATTGCAAAAATACGCTCAGATGAGCCTATCCGC 2063635 37 100.0 37 ..................................... TTCAGTTGACGCAGCTACAGGCGGGATAAGCGCACTA 2063561 37 100.0 35 ..................................... TCATCATTTTCCTGAATAATGTTAGCGATTTGAAT 2063489 37 100.0 35 ..................................... TATGCGAAACTCCAGGAATGAGGCCTCAATCCAGG 2063417 37 100.0 37 ..................................... ACTCTCTCGCTCGTGATATTTTCAAGATATAACTTTT 2063343 37 100.0 36 ..................................... TTGCCTACAGTTTGATACTCAATCGTGCCTACAGCT 2063270 37 100.0 34 ..................................... CGGCGACTCGCTGGCATGAAGACGACCTGATAGG 2063199 37 100.0 37 ..................................... GCGGTTGGGACTAAATTTTTTAAAGGTATGCAGCCGA 2063125 37 100.0 36 ..................................... AACTGCTCAATTTCAGGATGTGCAGCCGAGTACCCC 2063052 37 100.0 37 ..................................... CTCATAAAGTCGTCTGATTCAAAATCCGCATACAGGG 2062978 37 100.0 36 ..................................... TTTAGAGGGAGGATGTTAGGATTGCCGGAAGGCAAT 2062905 37 100.0 36 ..................................... CTTTTGTAAGCCCGTCAGAAGGCACATAAACAAGGG 2062832 37 100.0 36 ..................................... GAAAAAAAATAATCAGGATAATTTTGCTTTCGCTGC 2062759 37 100.0 37 ..................................... CACAGATGTTTGCAACGGCATAATCTCCCGAAGGCAT 2062685 37 100.0 36 ..................................... AGCCCATTGCGTAGCCTTCCCAGATTGGTATGCCTG 2062612 37 100.0 37 ..................................... TAAATCTGTCCAAGCCCAGCAAAAAAGAAGGATGCAA 2062538 37 100.0 36 ..................................... TTTATGTGTTCCTTTTCTTCAAGAAGATATTTCGTG 2062465 37 100.0 37 ..................................... TCACATTGAAGACTGAAAACGAATAACCCATTTTTAC 2062391 37 100.0 37 ..................................... AGATGCTGTGCACGTTTCCAGCTCGGGACGAAATGGG 2062317 37 100.0 37 ..................................... TGCACTTAATAAGAACGATGATTATAATACTCGGCTT 2062243 37 100.0 36 ..................................... TTATCAGATGTAATAATTTTGTAATCTTTGAGAAGG 2062170 37 100.0 36 ..................................... AGTAGACCCTTTGGAGGGCGCATTCCCCAAAGAGCC 2062097 37 100.0 38 ..................................... TTCCCTTTTCTGTATCTACAACCTGAAGCGGAAGATCT 2062022 37 100.0 34 ..................................... AAACACCTTCTTAATCTTCCTCTCCAACCAATCC 2061951 37 100.0 37 ..................................... CATCCTCCGGCAGGGGGCATCATGCCATATAGCACCC 2061877 37 100.0 36 ..................................... CAGTACCATAAATAAAGGTAATCTAGTCGTTGATTG 2061804 37 100.0 37 ..................................... CTAGACAAGCTTTCAAAATTGCATTAACCTGTGTTGC 2061730 37 100.0 38 ..................................... ATCAATGGTATTGCAGCAGCCGAGCAGCACCCCGAAAG 2061655 37 100.0 35 ..................................... CGGGATAAATTAATTTCAATGGTTCCCAGGCATAA 2061583 37 100.0 35 ..................................... TGATAAATATGCTTCACTTGTAGGATACGAAGAGG 2061511 37 100.0 36 ..................................... ATTATAATGCAGGTATTGCCGTCGGGGGATGGAATG 2061438 37 100.0 35 ..................................... ATCTTATCCAACTCTAAACAGTACGAGTTTATTGA 2061366 37 100.0 38 ..................................... CGCTTGCAAAAAGTGTATATCCGGTCCCGATGTTCATT 2061291 37 100.0 34 ..................................... ATGCTTTTTTCACAGACTCCGCGATATTATCCAG 2061220 37 100.0 37 ..................................... TCGATTGTATTGTACGCATTAAAACAGTGATTGAATG 2061146 37 100.0 35 ..................................... TAATAGGGGATCTTGTGACCATAGAGGATTATAAG 2061074 37 100.0 35 ..................................... AAATGTTCTGCCCGTTCAAGCTGAAAGTTAGCATG 2061002 37 100.0 35 ..................................... CTCAGAAAAGAAGCATTCCTAGCCGACCCCATGAT 2060930 37 100.0 37 ..................................... CTTCTATCAGGGTATGTCCTATTTGCTCAGTGGCGGT 2060856 37 100.0 35 ..................................... TTCCCGTGATTCTCAGAAATTTAGAATAGTTCTCT 2060784 37 100.0 36 ..................................... GGCTCATACTGTTTTGAGTGATCATCATTCGCAAAA 2060711 37 100.0 38 ..................................... CAGCCGATGTTTTTGACTTCTTCCCATCGGTCATTTTT 2060636 37 100.0 35 ..................................... TAAGTGATTGAACCCGAGGAAAAAATAATCCACGA 2060564 37 100.0 36 ..................................... TACATTTCGTTTTTCTTCACTAAGTTTTTAGCTTTG 2060491 37 100.0 36 ..................................... CAGCGTATAGGGTTGTCATGTTCGTAGGCATGAATA 2060418 37 100.0 36 ..................................... TCGGTTGCTATGTGTTGTGTGAGATTTAGAATCATT 2060345 37 100.0 36 ..................................... CGGTTGTAATCGTTATTATCGGGACCTTATGGCCTC 2060272 37 100.0 36 ..................................... ACGTTTTGAACTTGTCACCTGGTAATACAGTGTCCT 2060199 37 100.0 35 ..................................... AAAGCATTGACGAAGAAACGGGACTGTGTAGCGAA 2060127 37 100.0 37 ..................................... CTCACTACATACGGCTGCCCTTTATTTTCTCCATGTA 2060053 37 100.0 35 ..................................... CATGTGGGTCGGTGGATAGGCAACCATAATGTACA 2059981 37 100.0 37 ..................................... AAAAGTAGGGTCGCTTCTCTCTGGTCGGCTTCGTCAC 2059907 37 100.0 37 ..................................... TTGATTATATTTTGCTTGTTCCAACTTCCCTAATCGA 2059833 37 100.0 38 ..................................... TAAAAAATCCTCCCACAGTTCGTACATCTATATATCTT 2059758 37 100.0 36 ..................................... TACAAACAAGCTCAAATAATGCTAGAGTATTTCAAT 2059685 37 100.0 36 ..................................... ATTATTGCCGGTCATGGTATGTATCAGGCGGCACTT 2059612 37 100.0 36 ..................................... TGGATGGGAGGAACTTGTAGAATGCAAGATACATTA 2059539 37 100.0 35 ..................................... TTTCGAAGCGGGATTTAAAGTTCCCCTGTTTCATC 2059467 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 88 37 100.0 36 ATTCGAATGCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : AATCAAAAAATGTGCAAAAAATCGAGATTTAAATCTGTTTTATTCAAAAACTCTTTTTAAGGCTCAAAAGGAATTTGGAGAAAGATTAAGAGTATAAGAGTAAGAAAGATTAGTGACGGAGTTGTCTAAATATTATCGTTTTTGAAATGTTAAAAATTACTATATAAGCTGTTCCTTGAATTTATTAAAAATGACTTTAAATACGGCTCTGTAGAAAACCTACTTAATCGTCATTAATAGACTTAAAGTTCTCAGCAAAATTGAATCAGGCAATTCAGTTTTAATTTGTTAAGATTGGTTATTTCAGAGGATTTCTACAGAGCCTTAAATACAAAAGTTTAATAGAAAGAAAGGCATATAACGAGATATTTCCAAACCTCTAAAAAACGCTGTTTTTCTTGTATTTATAAAGGGTTTGATAATATCCCAACAAGAAATTTAGTTTTAATATAGGACTAATCTCAGGCTTTTTCTAGCCAAATAAAGGAAAATTTTCCCCT # Right flank : ATTTTACTTCGTAATGTTTTTGCGTGGCGATATCATATTCGCGAACAAATCTGCCAGATATTTTATTATAATTGTCGAATGAAATAGAACTTGGAATAACCTTCTGAAAATAAGATCCTATAATGTACCTGATATAGTATCTAAGCATATTGTCAGATATAATATACACAAACATGTAGGCTAATATAAGATACTTATAATCCTGAAGATTTATTCTTTACTTTTCTTATATAATTACACGTATAGGGGTTTAGCAGAGCTTATGCGATTGGATTTAAAATAATGGTTTTAGACCTTTAAATTATTAAATTTACATTAAAACCTTAATGTCTATGTGCTTGTTTTTGAGCTTCAATTGCATAAACTCTGTTTATAAAAAGGACAGACTATACAAATAATTGGAGGGGTATTAGAGTGAAGGAACGTGAAATACCAGGGCTTATAGAGCTGAAGATGGAATTTGAAAGCAAGCTGTCAGGCATAAAAGAGTACCAAGAGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGAATGCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 3 2810496-2812361 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032683.1 Methanosarcina flavescens strain E03.2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2810496 37 100.0 35 ..................................... ATAGATTTACATTCGGTATTATCTGTTATGTTCAT 2810568 37 100.0 36 ..................................... TACGTGGTTCAAATATTTCAGAAATGACGATCTCGT 2810641 37 100.0 37 ..................................... CACTTTCCATAGCGATACCAACAACTATACCGCCTTC 2810715 37 100.0 34 ..................................... CTGTGATGGCTGCCGATGGAATCGGGGAAAATGG 2810786 37 100.0 34 ..................................... TATACTGTATATCTGTATCCAACGTATATAAAGT 2810857 37 100.0 37 ..................................... CCGCCTAAATGACAGATAGCAGTACCTCGAATTTCCG 2810931 37 100.0 36 ..................................... AAAATTATAGCACCATCACCCACATTATTCGCAAAC 2811004 37 100.0 36 ..................................... TTCAAAGAATATAAAGTTATTCTTAGAGTCTATATG 2811077 37 100.0 37 ..................................... GTTTTTGATCCTGTAAATCTCTTCGCCGCTCAATCTG 2811151 37 100.0 37 ..................................... AGTCTGGAAGTTATCCAGCTTCAAAAAACGATTTTAC 2811225 37 100.0 37 ..................................... ACATCTTTGATACTGGGCTCGACTTCCTGGACTGCTG 2811299 37 100.0 35 ..................................... TTCGATTGAATATACGGTGGGCACTTGGTTAGTAG 2811371 37 100.0 37 ..................................... ATCCGGGGATCCTCTACTTTCGGACCAGGGCATCTGG 2811445 37 100.0 36 ..................................... ATAAACCCAAAGTCTATCTCTCCAACGTCAATGCTC 2811518 37 100.0 37 ..................................... TTCAGATGAAGAAATTGAAATTAATACTAAGTACCAG 2811592 37 100.0 35 ..................................... ATTCTGCAATGTATTTTGATACAGCCGGTCTTATG 2811664 37 100.0 37 ..................................... TTGACATGCAGAAAGCATGCCCTCTGATTTTCGTAAA 2811738 37 100.0 36 ..................................... AATATGTAAAATATTAAATAGTCCAATGTGCTAAAT 2811811 37 100.0 35 ..................................... CTAATCGCCCTACAAACCTGCAATGTATAGTTAAT 2811883 37 100.0 36 ..................................... TATCCCATCCGTTCCCAGCCATCAGCCTATAGAGCT 2811956 37 100.0 36 ..................................... TTCCAATAAGGGCTTTTACAGTTCGGACAAACTCTC 2812029 37 100.0 38 ..................................... TCTTTTCCAAATGGGGCACACGACGACCAGACCGACGT 2812104 37 100.0 36 ..................................... TATACGATTAGTACGTATATACTGTAAAGGAGATGT 2812177 37 100.0 37 ..................................... TAGAAGCTTGCGAACTGTGCGAAATCTGTATCTTCGG 2812251 37 100.0 37 ..................................... CCCATTTTGAGTGCTTCCGTGCTTGATACTAAAACAT 2812325 37 89.2 0 .................................TGGT | ========== ====== ====== ====== ===================================== ====================================== ================== 26 37 99.6 36 ATTCGAATGCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : GTCCAACTTATTAATATTTTAAACAAAGTGATATATTAAACTTTTGACACAAAATTTTACACAGTTCTGGAAAAATCGCAGAGATCTACAAAGGGATGACAGAAACCTGGCAGCTTGCTAATATTGAAAAAAGGTAGCGTAGGGGCATGCCGAGGATATAACTTCGCTAAAGACTCTTATATGTTAAGTTACAAGTTAAGCTATAATCTTAAAAAAAGTGAAAAATATTTAATTTTATACAAATAACATTATAAAATTGAACAATAGTTTTATGGCTACGGACTTAGAAAATTGGCTTGTGCTGTAAAAAAATATTGTTGATTGAAGAATAAGCCAAGATTTTAATAAGTAGAAAAGCATACACAGAATAATCAAAAACCATAAAAACACTATTTTTCTTGTATTTATAAAGGGTTTGATAATATCCCAACAAGAAATTTAGTTTTAATATAGGACTAATCTCAGGCTTTTTCTAGCCAAATAAAGGAAAATTTTCCCCT # Right flank : TAATTTTGCGCAGGAGTCTTTAGTCTGTACTTATCCACATTCGCAGTAAAACAGTTCCATGAATTGTACTATCAAACTTAACATACCTGCTGCTATTTTTATATAAACAGAATTATTTTAAATAGTAATTATCCGATTATTGTAAGAAAGGATCGCACAATTTTATTTTTATCATAACTTTTATATAATAATACTATGATTATGTGTTCCTAGAGGCTCACATAATAAAAACGGATAGGAAAAATGATAGAGACTATTTGGATAATCGTACCGAACTTAATAGCATCATACATGGTTATGGTCAATAAAGCGTTTTATGCCAATATGATTTATTGCTTCTGTTATCTTTTACTTATCTGGCATAACTATAATTCGGGTGACAGTTCGCAAATGATTTATTTCACAATTTTAGAGATAATGTCGATTGTCGGAGTCTTTTTGTATATATACCAAACTGGAAGAACTGTTGGAATTAATGTAAAGAAGAAAGAGCAACAGCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGAATGCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //