Array 1 678-54 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGEM01000044.1 Acinetobacter baumannii strain ARLG-1797 PR315_NODE_8.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 677 28 100.0 32 ............................ ACAAGATCCCGATAGTTTTTTACATAAAGCCC 617 28 100.0 32 ............................ AGCACAAAATTTATGGTATACAAAAGCAGCCA 557 28 100.0 32 ............................ TCTGATGCGATTAATTCTTGAATGTTCTCGGC 497 28 100.0 32 ............................ ATGTACATATGCTGTTTTAGCAATCATTGCTT 437 28 100.0 32 ............................ TTATAGAAACTTTCCCATGCATCCTCATAATC 377 28 100.0 32 ............................ TTAATGATACTACTCTCACCAATGCTGATTAC 317 28 100.0 32 ............................ TAAAGGCGGTCATAGTGACCGCCCCATATCGT 257 28 100.0 32 ............................ TCAACCTTTCTTTCTCTGGAGCAAATCGGTCA 197 28 100.0 32 ............................ AGCAGAATGTCTTGAGGCCGCCCGCGAAAATC 137 28 100.0 28 ............................ TAAATATCAGAAGGTGAACCTGCCCCAT 81 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 11 28 100.0 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AAAGAACAAAAAGCGCGAGAACCAGCGTCCCCACTTCGTCATCGCCCAGATGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 6178-7037 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGEM01000044.1 Acinetobacter baumannii strain ARLG-1797 PR315_NODE_8.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6178 28 67.9 26 T.AA.C....A.TG.....G..G..... TTAATAGTTATTATTAATTTTTATGT A [6187] 6233 28 82.1 32 A.CTA.......T............... ATAATCTTATAGGTGTCACGGCCATTAGGTTT 6293 28 85.7 32 ....C.....AT.C.............. TAGCCCTTCGGCTTGATGATTATTGAGTCTTT 6353 28 92.9 32 ...A...............G........ TATCGTGTATTTGATTCTAAAAAGAAAGTGAA 6413 28 89.3 32 ...A........CC.............. AAACTCACGAATAAACTGTTCTGGTTTCATTG 6473 28 96.4 32 ...A........................ CCCAAACTTCCCGACCATTCTCGATATAAGCA 6533 28 100.0 32 ............................ TGCGCCAGTCGGTGCCGTACCTAAATTTACTG 6593 28 100.0 30 ............................ TTTAAGCAAAAAAAGCCCCTTAAAAGGAGC 6651 28 100.0 32 ............................ CAGATCGTTGACGAGCTAGGCGCGACACCAGA 6711 28 100.0 32 ............................ TTCAATTGTGAAGTCTTTGCCCAGTAATGAAG 6771 28 96.4 32 ...A........................ ATTCGATAGACTGATTCTATAAGCTTATTTGC 6831 28 100.0 32 ............................ TTTCACCGAATGGCGATGGATTCAAGCCACAG 6891 28 92.9 32 ........C..T................ ACATTCAAAGAGGCTCATCGAATCCAATCGAA 6951 28 78.6 32 T..TA.......TC..T........... TTATCTTGAACCAGTGAAGCCGCGTTTTTACT 7011 27 82.1 0 ...TC.......T.........C.-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 91.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CATGCATTACAGCAGTAATAACATCCGTTGATTCGAGCATTAGGCCATCTTCTTCTTGCTGCTAAAACTGCGCTAAAGCAATTCAAATGCTCACCTAAATCTACTCTGTTTTGAGGATATGGCATGAATGAGCAACCTGTTGTTAGGTTGTGAACTTCATAATCGCCATTTGCTTGAACATTTTGATTGATAATGAATTTAGACATAGATTTTACTCCTCACAAATCATAATGATTGAAAGTAGACCTACGCTTTGCTGTATAGCAGTATGAGACAAAAGTTTAAAATGTTGTGCTATCATTTGGATAGTCCTTCTTTAAGTTATAGAGCTTTGGAAACGGACAAAAGCAGATATGAAGTTTTCGACGGCTAAGTATCTGCTTTTTTATGTTCGTTTAGTATTCAAAATATATAGTTTTAATATGTAAGTCAAATAAAATATATATATAACTATTAAGGGATATACTTTACTGATTTCAATTAAGAGTTATACTAAATGC # Right flank : ATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAATTATGCATGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGATATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTGCGAAGAATGAAGCTTGCATGGGTTGTAGGAGCAAGACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGGTCAAAGCAAGTAGCTTGTTGGCGGGTGCAGCAGGGGACATGCATGATATTGGTAAGGCATCCCAACATTTTCA # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 45-4234 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGEM01000035.1 Acinetobacter baumannii strain ARLG-1797 PR315_NODE_38.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================================== ================== 45 28 71.4 32 T..G...T.A.....T...T....T..T AGAATCATGTCTTCTGGCACGCCGCTAATCTC 105 28 100.0 32 ............................ TCTATAACAGCAGGTGAATAGCCCTGCCCCTT 165 28 100.0 32 ............................ AAGAAGAAAAAGGGGTTAAACCTGCCTACCCA 225 28 100.0 32 ............................ TTCACATCTTTTCTTCTGCAACCATGGTAAAG 285 28 100.0 32 ............................ TTCAAAAACGGCGTTTCTGCAATGATCGATGG 345 28 100.0 32 ............................ AAGGATAATCAGCACAACATCCGGTTTTAGAT 405 28 100.0 32 ............................ TATTGCGCCATCTGGGGCATGTTCTTTAATAA 465 28 100.0 32 ............................ AGAAACTCGTAGCCTTACCAGAAACCTTATCT 525 28 100.0 32 ............................ ATCCCAGTTGTAAGGAGGATGATCATGGATTT 585 28 100.0 32 ............................ CAAAGCCCAGTTTGATTACGTCAAGGTCGAGC 645 28 100.0 32 ............................ GGTAGTCATTTGTTCCAAGAAAAATGATTACA 705 28 100.0 32 ............................ CCAGCCCGAACAAATGGCACAGCCGTTATTCC 765 28 100.0 32 ............................ ATCAATCATTGCGGAAATCCCGTCTTTATAGG 825 28 100.0 32 ............................ AAATACTGAGTTGATTCCTTCGCTTATGACAT 885 28 100.0 33 ............................ TTAAAGCTGAAAAAGCATTATCAGATAATGCAC 946 28 100.0 32 ............................ TTTATCCGGTTATCGCGATGCAGTTTATGAGC 1006 28 100.0 32 ............................ TGATCCCTCAATGTCAGTCTCACGATAGCTAA 1066 28 100.0 32 ............................ ACTAACGGCTGAACTGGTGGTCGACTAAGCAC 1126 28 100.0 32 ............................ ACTGTTGAACTGATTAGTGCATAACCGTCTGT 1186 28 100.0 32 ............................ TACGGGGGGAGTGTGGCGGGCGCAGTTTCGGC 1246 28 100.0 32 ............................ ACAAAGCTTGATGACATGGGAGCAACTGCAGC 1306 28 100.0 32 ............................ ACATGCGGTCCTCTGGTAAATCAATACCTGTG 1366 28 100.0 32 ............................ TTCATTGAGGTTATAAATATAACGAACTGTTT 1426 28 100.0 32 ............................ AATACCACTATTCGATGAAAACGCCTAGCCAA 1486 28 100.0 32 ............................ CAAGCCAACCTTTCTCTAAAGATGTTTGGTTC 1546 28 100.0 32 ............................ ATCTGGACCGCTACCATGTGCGAAACTTGAAA 1606 28 100.0 32 ............................ TATCGGGCGCTTGTTCTTTTGAGGTGTCTCAT 1666 28 100.0 32 ............................ ATGAGAGAGCGAATTTTTGCATTAGTCGATGT 1726 28 100.0 32 ............................ AATATGCGACAGATCTAAAAACGCTTGAGGAA 1786 28 92.9 32 ...AC....................... AGCAAAGTTTCAGGACAAAGTTATAGCGCAAT 1846 28 92.9 32 ...AC....................... TAGCTGTAACTAGGGGCACACATTCATAGGAG 1906 28 92.9 32 ...AC....................... ACGATCATCATTCAGAGAATTTCTTAAACCTG 1966 28 92.9 32 ...AC....................... AAAGCAGAAACAGCAGAACCCAGAATCTTTGT 2026 28 92.9 32 ...AC....................... TTTAGTTAGCCCAACAAGAAATTGATCAAGAA 2086 28 89.3 32 ....T.......AT.............. TTTCTTTAATAGGTCTCTTTCATTGCCAATGA 2146 28 89.3 32 ....T.......AT.............. TTGTATTGTTGCTGACTTAAACCAATTCTTAC 2206 28 89.3 33 ....T.......AT.............. CTTGAGAAATTCCATTCTCTTTGGGTACAGGTA 2267 28 89.3 32 ....T.......AT.............. ACAATATAGATATGCTCAGCGTTTTGAACCGA 2327 28 89.3 32 ....T.......AT.............. TTTGTAACCACCAGTTAAAGTATTGACTAAAT 2387 28 89.3 33 ....T.......AT.............. TTTGACAAAAAAAGTGTTTGGATGCTTTCGCCA 2448 28 89.3 32 ....T.......AT.............. ATTGAGAATCCAGTAGGCCGAATAGAAAAGCT 2508 28 89.3 32 ....T.......AT.............. TGTTTTGCTAATTTATCAATATCGATTTTCAC 2568 28 85.7 32 ...AC.......AT.............. ACAGGGGTCAAGTTCAGAAGATTTACGTTACA 2628 28 92.9 32 ...GC....................... GTCATAGTCCTTCTGAACACCAAATGTATAAG 2688 28 92.9 32 ...TC....................... GGTATTAGTGCGAATTGGCTTTTAGCCCACGC 2748 28 89.3 32 ....C.......GT.............. TTAAATGCTCAACTATTTCTGTAGCTAATGGA 2808 28 85.7 32 ...GC....T..A............... TTCAAATGATTTAATGAGCTTGTAGCCATTTT 2868 28 85.7 32 ...GC.......TT.............. ACGTCTTCTAATGATGGACTTTAATCCAATAT 2928 28 85.7 32 A..GA.......T............... ATCTCACTGAAGATATGACCATCACTTTCTTC 2988 28 89.3 32 ..CGC....................... AAGCCATTTACTTTGATAAAGCGACACATAGC 3048 28 89.3 32 ....T.......AT.............. AGCTTCAACACGTGTGCTATTAGGCGGCAAAG 3108 28 89.3 32 ....T.......AT.............. ATGAGCAAATTATCAATTGATCTATCTGCAAG 3168 28 96.4 32 ....T....................... TAGACGGTGTTACCTGTAGGCGGTGTCTACTG 3228 28 89.3 32 ...TC........T.............. ATCGTTTGAATAATATGGACAATCCAGCCAAT 3288 28 96.4 32 ............T............... GCAGCATCAAACGAGATATTGGCTAACATATT 3348 28 85.7 32 ...GT.....A..............C.. CAAATAGTTTTAGCTATCTGAGCATTTAATTT 3408 28 96.4 32 .............T.............. TTCATCACGTAGCCTTTTACACGCATCTTGCG 3468 28 85.7 51 ....T.......AT......C....... TGTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 3547 28 100.0 32 ............................ TATATATACTATTTTCTCCGTCATTTTCTTTT 3607 28 89.3 32 ...TC...................A... TGATAGTTCGGAGCATGTAAATCTCCAAAATG 3667 28 85.7 31 A..TA.......A............... CCAGTTTGCTGAAAATCACCAATACGGTCTT G [3690] 3727 28 89.3 32 ...TC......T................ GATTCTATGAGCGTGACCATGACTCTATTTAA 3787 28 89.3 32 ...GC........T.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 3847 28 92.9 32 ............AT.............. GATCATCTACAGTGATTGAATAAACGGTTTTT 3907 28 82.1 32 ...GC......TGT.............. GATTCTATGAGCGTGACCATGACTCTATTTAA 3967 28 89.3 32 ...GC........T.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 4027 28 92.9 32 ............AT.............. GATCATCTACAGTGATTGAATAAACGGTTTTT 4087 28 82.1 32 ...GC......TGT.............. CAACGACGACGCCGTGTGTTTGTTATCGGAAG 4147 28 85.7 32 ...GC....T..T............... CAAGTAGGATTTGCAGCCCCAATAGTCTTTAT 4207 28 82.1 0 .........T..A..A........AT.. | ========== ====== ====== ====== ============================ =================================================== ================== 70 28 93.5 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : TTTTTTTATAAGATACCGCGTCCATCGAGAGCTCAACTAGGCGTT # Right flank : ATTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACAAAAATCCTAAATAATTGATTTTATAATTGCTTTTTCGGCATATAACATGCTGGTATAACTCATGTATAACATTTAATTTTGATTAAGTATGATTAACAACAGTTTCTTTTTTGTTCAAGTCCGACTATAGGAGTTGAACTCATTTTGAAAAATTCTAGGCTCTTCCCACTTTTATTTTAGCTTACTATAAAGGTCAATATAAAAATTATGATAGAAACGCGTTCTCTTTCTCTTAATTTTAGGGCTTACAACTGAGCTGTATGTAACCGAAGTTTCCTCTATTTCTTCCTCAATTAATCCTACAACTTCTAAATCTTTGAAGTCACTAACTAAAAGATTTTCAAATTCCCAATATTTGTTGTAATCAGTGGCATCTTTTGGCAATCCTTCACAAGGTATGGATTGTCCGCGGAGCC # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-72] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //