Array 1 5760-9967 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJMJ01000027.1 Streptococcus sanguinis strain KLC08 D8889_contig027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 5760 32 100.0 36 ................................ AGTTCGTCTTTTGTCATGTCGTTTCCTCCTAGTCGT 5828 32 100.0 34 ................................ ACGTCTAGCTGGTGCAAGACCAAACCCGAGGTAA 5894 32 100.0 34 ................................ ATAGACAGACTTACCAACACTTAGCCAAAAGGTC 5960 32 100.0 35 ................................ ATGACAACGCATAACGGGCGCACTTAGCGCCCCTT 6027 32 100.0 35 ................................ ATCGTACGCCCGCAAGTATGCGGCGCAGGGATTGT 6094 32 100.0 34 ................................ TCCTATGAGCTGGAGCTTAAATAATGGGAATACG 6160 32 100.0 34 ................................ TCTACCAAGTTTGAAAGCTACTTGAACGAAGCAG 6226 32 100.0 35 ................................ TATTTTCAGCGTGAAAGTATTTAGCAAGTAAGGAA 6293 32 100.0 36 ................................ ACAAAGCCACGATCCAGCGTTGGGAATACGGCGCAG 6361 32 100.0 33 ................................ GCAGAAGTCGGGGAGGTTTTGGAAGAAATCAAT 6426 32 100.0 34 ................................ TGGGTCATTGTGTCAGCTCTCCCTTTTTCGTTGT 6492 32 100.0 35 ................................ AAAATAATATCTGCCGTCTCATTGAACGGATAGTC 6559 32 100.0 34 ................................ TTGTACGGCGTAGAAACCTACAAGCGGGCTAATG 6625 32 100.0 33 ................................ ATTGAAGCTATCGAGCGCAAGCGAAAGGACGCA 6690 32 100.0 34 ................................ CAACTATCAAACGAAGCCTATTCGTTGCTTAAAT 6756 32 100.0 33 ................................ TGGTATTGTCGAAAATCTCGCGGGGGTCGTCCC 6821 32 100.0 33 ................................ CTGTGAGGTCTGCCGAGATTGTGACTGTCTTGT 6886 32 100.0 33 ................................ AAAGTCGGGTAGGTCTTGACGCCGAACAGCTCG 6951 32 100.0 34 ................................ GTATCCGTTGAAATATATTGCGTATTTGTCGCAT 7017 32 100.0 34 ................................ TAACCATTGTATTGACACCCCCTGCAGCATAATA 7083 32 100.0 35 ................................ ATCATACAACAACCAAGATAAAAGCTTATCCCACC 7150 32 100.0 34 ................................ ACACGCATCTTCCAGTTCCTTGACGTACAGCGAC 7216 32 100.0 34 ................................ TATGGTGCTGTTCTGGGGGCACTCATAACATTAA 7282 32 100.0 34 ................................ TTTCCAGCAGCTAAATAATCTTGTACCATTTTTT 7348 32 100.0 33 ................................ TTAATAACATTATTTCTGGCATTTTTAAGTCAG 7413 32 100.0 34 ................................ TACTAGTCAATCAGAAGGGATCAATTATGCAGGA 7479 32 100.0 33 ................................ AAGTACATTTAACAGACTTAAACGAGGAATTAA 7544 32 100.0 33 ................................ CGTGTCAACCCCATCATCAGTGGTGAACCTGTA 7609 32 100.0 33 ................................ TGCTCAATGGTAGATATCAGCTTGCTATCATCA 7674 32 100.0 36 ................................ TAATGGCTATGCGCCACAGTCTCCTACTCGAGACGT 7742 32 100.0 35 ................................ AAAAAAATCACCTCATAAACATTAACACTACGAGC 7809 32 100.0 36 ................................ TCAATGGTCGCAAACACTGCTCGCATACCCATGGCT 7877 32 100.0 34 ................................ ATGGCTGCTGTGTACAAGGTGTTCCTGGATCCGC 7943 32 100.0 33 ................................ CGAAGTATCCGTATTCGTCTTTACTTTTATCAT 8008 32 100.0 35 ................................ CTTTAGTTCCAAGTACTTATCATAATAATATGTGG 8075 32 100.0 33 ................................ TTTTGTATGCTTGGAAAAGGTCTCGATCGCTTT 8140 32 100.0 35 ................................ CTTTCTCGTAAACCCTAACAAGAAAATCACCTTTC 8207 32 100.0 34 ................................ TCAATAAAATCTCGCTCAACCAGCTTCCTATCTG 8273 32 100.0 34 ................................ ATCAACAAGTACCACTACTGGCTTGTCATAGATA 8339 32 100.0 35 ................................ TGAACCTATGCTTGATACTGAATATATGGACAAGG 8406 32 100.0 37 ................................ TATTGTTCGTGATAAAGAAGGTAATCCTGTAGTTAAG 8475 32 100.0 35 ................................ AAATGCTATTCAATACTTGGGAGCTCAACTTTTCC 8542 32 100.0 35 ................................ AAGTATGGTAAATTTGTAGGTCAGGCAGAAATGCC 8609 32 100.0 34 ................................ AGTTATCAAATCTATCGGCGGTGCGATTAAATCT 8675 32 100.0 36 ................................ GCAACAGGATGAGAGGGGTGGAAATTTGACAAAAAT 8743 32 100.0 35 ................................ CATCCAGAGAAAATGATCAGTCAATCTGCAGGCTC 8810 32 100.0 35 ................................ GAAAGATAAAGCGAGCTTTTAAAGACATCATTGTG 8877 32 100.0 33 ................................ TCGTAAAAATAATTAGGGGGTAATCTATGTTAG 8942 32 100.0 34 ................................ AATATTTATTTGCTCTAAATCAATCTCTTTTGAT 9008 32 100.0 35 ................................ TGTTGTAGGTTTAATTTCTTGAACCTTATCTGCTC 9075 32 100.0 33 ................................ TGATAAGGGGCAAGCTATCGATCCACTGACTAT 9140 32 100.0 33 ................................ AATGACTACTTTAAGGAACACCCTCTGAATAAA 9205 32 100.0 35 ................................ TTTAGATGGTGCTAAAGATTTACCCGTTGGTTGGT 9272 32 100.0 35 ................................ TGGACGGACACGCGCGCCGTCATGAGCAGCAACGG 9339 32 100.0 36 ................................ CTGAGTAAGTCGTTCCTGCACTTGTAGCCGTTTAGC 9407 32 100.0 33 ................................ AGGTGTTCCTTGACATGAAGCTAAATGGAGTAC 9472 32 100.0 34 ................................ TAAAATATAGGCTAGCTGCGTCACAATGTCACTA 9538 32 100.0 33 ................................ AGGCAGCTTCTCATCGAAAGACGGATATACTTC 9603 32 100.0 34 ................................ TGAACTACAAAGTAATCCATATCCTCTCCGTCCG 9669 32 100.0 34 ................................ GTGCTGGTGTCTCTGGCATGAAAACTGTCCTGAA 9735 32 100.0 35 ................................ TGGTCTGCTCAAAGTCCTAGAAGTGAAATCAAGCA 9802 32 100.0 36 ................................ TGCAAGTCTAAACGGCTCATTGTCGCTAGAAAGCAA 9870 32 96.9 34 ...................A............ GACGACGTTTAGAATGCCGCCGAGTTCGTGCTTT 9936 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 64 32 100.0 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : CTAAAGCAATTCGTGGAGAATTGGAATCCTATCCGCCGTTTTTAATATAGGAGGCAGTTTATGATGGTATTAGTAACATATGATGTGAATACTGAAACTGCACAAGGCAGGAAAAGACTGCGTCATGTAGCAAAATTATGTGTTGATTACGGTCAACGCGTTCAGAATTCAGTCTTTGAATGCTCAGTAACTCCTGCAGAATTTGTAGAAATAAAGGCTAAGCTTTTGAGTATTATTGACACTGAGTCTGACAGTATTCGTTTTTATTTGCTAGGTAAGAACTGGCAAAATCGTCTAGAAACGATTGGACGTGATACGAGTTATGATCCCGATATAGGTGTATTACTCCTTTAAATTGCTTAGTGCGAATAGTGGTTACTCATAAAAAAGTAGGGCTTTCGCGCGAAAAATAAACAAAAATAAGGTAAAATTTCAAAATTCTGGAAGAGTTTTCTTTCCTTGAAACATAATTTTTGCCTAAAACAGTGCAACTACGCGCT # Right flank : TGCGGAAGCGGTGAAGGAAGTAGCGAGCTTTTACGGTCGCTTCCTATATTTAGCTTTCTAGAGGAGAGCGAAGTAGAGAACTAATAATGTACGAAATGCTATTAAAAATAATCGAATATACTGCATTCGAAAAGAGACCTAAATTTTAGGTCTCTTGTTTCTCTATTTCCCCAAGCAGAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAAGTGCGAGTCATATCGACTTGGAGAAGGTCAACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATCAAGGAAATGTGGCGGGCGTTGGATAGGTAGGTAGCATCTTGCTCGACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCGATATTTTGATTGTGGAGGACAGAAATCTTGATAGCATCTGCTGGCAGCTGGTCCAGCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //