Array 1 748033-748516 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KB821326.1 Staphylococcus aureus M0408 acrHk-supercont1.1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                                                                         	Insertion/Deletion
==========	======	======	======	=================================	========================================================================================	==================
    748033	    33	 100.0	    33	.................................	GACTGGGAGGCAGAACAATGATCTATTTAGGCG                                                       	
    748099	    33	  97.0	    33	.......................A.........	GACAAGTGATAAGTTCTGTTGCTGCTGCTACAG                                                       	
    748165	    33	  97.0	    33	.......................A.........	GACATTTTGAATATAGATATAAAGTAAACGCAG                                                       	
    748231	    33	 100.0	    33	.................................	TATAACCGGAAACGTTTATGTTCCCAGTCTACC                                                       	
    748297	    33	  87.9	    88	.............................NNNN	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	
    748418	    33	  75.8	    33	NNNNNNNN.........................	TATAACCGGAAACGTTTATGTTCCCAGTCTACC                                                       	
    748484	    33	 100.0	     0	.................................	|                                                                                       	
==========	======	======	======	=================================	========================================================================================	==================
         7	    33	  94.0	    42	GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA	                                                                                        	       

# Left flank :   ATTATCAAGCAAAAGAAAAAGCATTTGTAATCTATTTATATCCAGAAGCTGGCCTAAGCATTAAAGAACAAATAAGATTTAGAAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCACGTTTTTTATCTGAAAGTATTAAAGGACTAAATTATTTTATTAATAATGTTCAAATGATCACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCACCAATTAATGTAGAAAAAGAACAGATTGAAGAGAGGTTTGAATATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATTTCTAACTATTTACTTGCGGATATCATTGTTTTTAACGATATTGATCTTTATATCCTTGTTTCATTTTTGAAACACTGTAATTTAGAGTATAAATTAGATATCGATAAAACAAAAATTTCATTAGCATTATCGTCATATCTATTTTCTTAATTATTTTGCGGATTTATAATGATGCTAGAG
# Right flank :  ATATAGCAAAATCTCTGACAAGAAGAACCTTATCAAAAACCGCATCATTTATAATTTACTTCTTAAACACATAACAGCAATTCTCATAAACTTCATACGTTCCGATACGTTCAAAATCCCTTTATGAAGCGGCTGAAAAAACCGCATCATTTATGATATGCTTCTCCACGCATAATCTTAAATGCTCTGTACACTTGTTCAATTAACACAACCCGCATCATTTGATGTGGGAATGTCATTTTGCTGAATGATAGTGCGTAGTTACTGCGTTGTAAGACGTCCTTGTGCAGGCCGTTTGATCCGCCAATGACGAATACAAAGTCGCTTTGCCCTTGGGTCATGCGTTGGTTCAATTCTTGGGCCAATCCTTCGGAAGATAGCATCTTTCCTTGTATTTCTAATGTAATGACTGTTGATTGTGGTTTGATTTTGGCTAGTATTCGTTGGCCTTCTTTTTCTTTTACTTGCTCAATTTCTTTGTCGCTCATATTTTCTGGTGC

# Questionable array : NO	 Score: 5.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.79, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA
# Alternate repeat :   GTTTTAGTACTCTGTAATTTTAGATATGAGGTA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.70%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.10,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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