Array 1 20131-20952 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LXYZ01000076.1 Ligilactobacillus salivarius strain KLW008 NODE_20_length_34898_cov_2.75025_ID_6998, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     20131	    29	 100.0	    32	.............................	TATGGCAGAAAGCCCGGAAATTAGATTATAAG 	
     20192	    29	 100.0	    33	.............................	GTAACTTCAAATTCAGCTACTTTGAGTTGGACG	
     20254	    29	 100.0	    32	.............................	TACAAGTAGCGAATGTGCAACAACAAAAGGTT 	
     20315	    29	 100.0	    32	.............................	CAGATACCCACTTAGCTAAATCAGGATCATTA 	
     20376	    29	 100.0	    32	.............................	CATAGCAGCCAAGCTATAACATTACGTTATAT 	
     20437	    29	 100.0	    32	.............................	TGATAATATTCATTTTTCCTTGATCTGCAAAA 	
     20498	    29	 100.0	    32	.............................	TATAGACTTAGTGAAGAAGTTTAATAATTTAA 	
     20559	    29	  96.6	    32	............................C	TAGCTTTCACACTTGCTCCATACTGTCGCGTG 	
     20620	    29	 100.0	    32	.............................	ATTACAGTCGACTGGGAACAAAGCGACTACAA 	
     20681	    29	 100.0	    32	.............................	GAAACAAGGCAATTTCTATGTTAAAGATGGAG 	
     20742	    29	 100.0	    32	.............................	ATAAGGCTAAAGTGCTTAAGGATAGTGGTTCA 	
     20803	    29	 100.0	    32	.............................	ACATATGCTAATTCTTCCTTAGCATCATCTGG 	
     20864	    29	 100.0	    32	.............................	TTTGAAGATGGCACAGCTTATTTAGCAGTTGC 	
     20925	    28	  86.2	     0	........T.......-C.........A.	|                                	
==========	======	======	======	=============================	=================================	==================
        14	    29	  98.8	    32	GTGTTCCCCATGTATGTGGGGGTGATCCT	                                 	       

# Left flank :   TTAGAGAAAGATAGTATTATATCAATAGGTGCCGTTAAAGTAGAAAATAATAGCAAGCATGACTATTATTCTCTTATTAAAGGTATAGAAGAAATTCCAGATGAAATCAGTGAGTTAACTGGTATAGGAATTGATGAATTGAATAAAGATGGTGAAGATATATATAAAGTTTTAAAAGTATTGTATGGGGTTTTAGATGATGCTATTATTATTGGGTATAATCTTAATTTTGATCTTAATTTTCTTAATAGAGAATATGAGCAATATACTGAACTTAAGTTAGTAAATAAGGTGATTGATTTACTCCCAATAGTAAAAAAACAGTGTCGTTTTTTAGATAATTATCGCTTAGAAACGGTATTGCAATATTTTGGTATAGAAAATTCTCATCCACATAATGCATTGGAAGATGCTAAGGCTTGTATTGAATTGTATGAGAAACTAATAAAAAACAAATAGTAGTAACTTCAAAAAGATCGATTTAATAGGGATATTTTACT
# Right flank :  TTTAGAAAAATTAAAGAAGTAAGGTCTTAAGTTATATTTCTAAAGTACTTTATAATATAGATTATAATATCCTCTGAGTATACAGATGAAATAGAAAATGACTCTGATGCTCAGGGGGTATTTCTATGGAAAAAAATCTAAATATTCAGTTGAAGGAAAACTATCAATACTTAATGAAACTTCACATATCGGAATTTTTGAAGTAACAATTAAGTATGGAATCGATTATAAAACTATTGGACGATGGAGACTGCTTTATCAGTATCAAGATCTTTAACCAAGTAATAGAAATCAGAATTATTCTAAGGAATTCAAGTATTTATTAGTTGAGCAATACAAACATTTAAACGAACCCGCGAAACTATTTGCGATAAAAAAGGTCTACGTTCAGTAATTCAGTTTAGGCAATGGATTATCTGATCCGGTATAATGAATCTAACTTAAGGACCAAGGACCCAGAAAGAGAGATTCAAAAAAAGAGTGGACGAAAGACTAGTTTT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCATGTATGTGGGGGTGATCCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-9.50,-7.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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