Array 1 11912-10602 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIFB010000017.1 Salinibacter ruber strain SD01 Ga0376635_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11911 29 100.0 32 ............................. CACTTACTCCCATGGACAGAAGCATAGAGGAC 11850 29 100.0 32 ............................. TCCATCAAGCAGGGCAAATTCTTCGTGGACCC 11789 29 100.0 32 ............................. AAAGTAGAGCAAGGCGACGACGAGCCCGGGGA 11728 29 100.0 32 ............................. GCTTTGCACAGAGGCGTCTTGGGCGAGGCCGA 11667 29 100.0 32 ............................. TGGACGAGGATCACGAGGCGCTATTCTGAGGC 11606 29 100.0 32 ............................. TCGCCGGGAAGCCGATTCCCGCCGAAGATGTC 11545 29 100.0 32 ............................. ATCTACTTATACACCGAGGCAAGGAAAGAAAT 11484 29 96.6 32 ............................T CAGTGAAAGCGTTGTGAGTGTGAGGGCGGATC 11423 29 100.0 32 ............................. TCGGTATCAATGAGGCCCTTTTCTTTCCAGCC 11362 29 100.0 32 ............................. GGCCCGGATCAGGGCTTCGACTCTTTTCAGGA 11301 29 100.0 32 ............................. AGCGAAGCCATCACGGCGTAATGGACGCACTT 11240 29 100.0 32 ............................. CTGTGGCATGGTCGTCACCTCCGCCGTCAAGG 11179 29 100.0 32 ............................. AACGACCTCTTTGCCACGATGGAGATTCTGCG 11118 29 100.0 32 ............................. TTGAGGCATGGTCATCACCTCCGCCATTGAGG 11057 29 100.0 32 ............................. CTGTCCGACACGATTCTCGCAGACGTGGACAC 10996 29 100.0 32 ............................. AAGCGCATGCAGGTCATGGACGCGTCGGAGAT 10935 29 100.0 32 ............................. TTGAGGCATGGTCGTCACCTCCCCCGTCGAGG 10874 29 100.0 32 ............................. TGAAGCGAGCGGCTGGTGGGGTTGCCGTCGTC 10813 29 100.0 32 ............................. TAAAGCATACTCGTTATTCTGTGTTTGCGGTG 10752 29 96.6 32 ............................T CTCCCCGCTCTGGAGCTCCAGGATCAGCTTTC 10691 29 100.0 32 ............................. TTTCCAGCCGCATATGCGGCACCTGCGTTGGC 10630 29 86.2 0 C............G.......G......A | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.1 32 GGTAGCCCCGTACACACGGGGATAGACCC # Left flank : ATCCGCCTCCTCGGCTGGCCGAAGAAGGACTTCGTTGAGCACGAGGGCCTGTGGCTTACCCACCGCGACCTCACCGAAGCACACGACACCGAAGAGCTGCTCAAGCAAGCCGAGGTCGAAGAACAGCCCATCGGTGAAGAAGACCCTACCGTGCTTCCTACCGGAAGCGCAGAAGGCCTCCTGTAACTGGCCTCCCGTAGCTGGCCTCCCGTAGCTGGCCTCCCGTAGCTGGCCTCTTGTAACTGATGCCCGCTGCTAGGGCCTAGCCAGGGGAGCGCGACCCCTTGCGGGGAACGCAACCTACTGCAGGAAGGTCTCTCCGGGCATGTTCTCTCATGTTCTTTGACGTTTCCATTCTTCCAAACTACTATTTTAAGTAGCGGTGGGCGAGCACGTAGCGCGCCGCAGTCCAACCTTTCCTGCGACAAAGTGACGCAGAAAAAGGGTAGAAGGAAAGAAAATGCTCTTTCCATGCCGGAACGGTGACACTTTGTAGCAGG # Right flank : TTCCGTGAGGGCGGCCATTACTCAAAAGAAGAAAGCAGAAACGGCGACTCATGCCTGTTCACCCTCCTTTAGCTTCAGCCCGAACCCTCCCGGCACGATCTCGCCCTCTTCAATCAACTGCTCGACTTCCCCTTCGACCAAGGCCTTCAGATTCTTCCCAGCTCGATTGAATCCAAGAAGCCGGACAGCCTCCCTCGGAATCTCATCTTCCAGAAGCGGAGCCCGGCGTCTCAAGAGAAGCCGCACTGCCTCTCTAACTTCGGCCGGCGGGATTTTATCAGTGTCGAACGAGCGGTCGGGAAGGTCCCGAGATCGGACTGGAGGCGTGTCCATTCCAGGCTTCCAAAGGTAATCTCCTCTTCGGTCGACCTCACCGCGGGACTCCAGCGCTGAGATGGCTTCGGACATTCGGCCTTTGATTCTGCTTCCGAGCTGGGAGAAGCCCCACTTCCCCATTGCGCGCCGCGCCGCATCTTCGACGTGGACGGGCGACTCTTTCT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTAGCCCCGTACACACGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 25277-23232 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIFB010000017.1 Salinibacter ruber strain SD01 Ga0376635_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25276 29 100.0 32 ............................. TCAAAGTATTTCGGCCATGTGTCGCCGACGCC 25215 29 100.0 32 ............................. TGTAGCGATTTTCAGAGCCAGCAGGATGCACA 25154 29 100.0 32 ............................. TACTCGATTGCTAAGTCCGGCGGCCGACCGCC 25093 29 100.0 32 ............................. CGTCTACGGGGGGGGAGTGAGGTAATTTACCA 25032 29 100.0 32 ............................. TCAAAGATTACCTCTCATGGAGACGGAGGGTA 24971 29 100.0 32 ............................. CGAATCGATGTTTTTGACCTGCTCTCCTACAA 24910 29 100.0 32 ............................. TCACTGCGGATGAGCTGCGCCCCGCCGCGAAG 24849 29 100.0 32 ............................. CGTTAGCCGGGAAGCAATGTAATAGGGCGGGC 24788 29 100.0 32 ............................. GACGGTGACGATCAGATAAGCGCAGGCATTTC 24727 29 100.0 32 ............................. CCTGGCGTTGATCTCTTTCGGAGTGTTCAGCA 24666 29 100.0 32 ............................. AGGCCGGACGTGACGTAGGGCTTCGAGTCCTC 24605 29 96.6 32 ............................T CCGTTCAGCTTGCGCTTCACCTCTTGGAGCGC 24544 29 96.6 32 ............................G CAGGCATCCAGGTTCGGGAAGTCCCCTCGCAA 24483 29 100.0 32 ............................. CGGCCGCAGATGCAGTCGCCGGGGGACCTCGG 24422 29 100.0 32 ............................. AGCCCAGATGAGAAGCAAGAGGTTGCGGGGGT 24361 29 100.0 32 ............................. GGAAACCCCAGGGGAAGCACCACCACGCCGAA 24300 29 100.0 32 ............................. GGCATATTATCCCGCCCATAGATCCCCCAATA 24239 29 100.0 32 ............................. GCGGCCAAGGCACAGGGCTAGGGGGTCTCTAA 24178 29 100.0 32 ............................. CCAGGCTTTGAGAACACCCTGACTCAATGGGG 24117 29 100.0 32 ............................. GCACGGCCAACAAGGACCTGCTGGAAGAGATC 24056 29 100.0 32 ............................. CAATCCCTCCAGCTTGAGGTGAACGCCAAGGC 23995 29 100.0 32 ............................. GCGGCTGATTTTGCGTTATGCACCCATCTCAT 23934 29 100.0 32 ............................. GAACGCAATCGCTCCGTATGGATACTCGCGCT 23873 29 100.0 32 ............................. ATCATCTTTTATGGCGACCCTGACGTAGAAAC 23812 29 100.0 32 ............................. ACGCCATTGAAGCGCGGGGCACCCAAGCGCAA 23751 29 100.0 32 ............................. CCTGCCGCCGACCTTTCCGAGGTGCCGACACT 23690 29 100.0 32 ............................. CAACAGGCGTACCTGCTATGCTAAAGGCACTC 23629 29 100.0 32 ............................. ATCGGTTAGGATTGCAGCGAGCGTGCGTAGCT 23568 29 100.0 32 ............................. TACGCCGGAGAGATCGGAAGACCCATGCGGAT 23507 29 100.0 32 ............................. CGAGACCACCATGAGGTTTCGGGAGGGTATTC 23446 29 100.0 32 ............................. ACGACCACGATGATCTCTTGGACCGAGTGGTC 23385 29 100.0 32 ............................. TGGTGGAGGGGGTCGTTTTGAGACCGGGGGTT 23324 29 100.0 32 ............................. TCCACGCCCGACGATACCGACACGGAGCGGGT 23263 29 93.1 0 ...G....................T.... | T,AG [23235,23239] ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.6 32 GGTAACTCCGCACACGCGGAGATAGACCC # Left flank : TTCTAGCTACTTTCCGGATGTCCTCCTGGCGGTCATGGTCAGGAGTTCTCTCTCGGGAAGAGCGGTCGCTTTCGGGCATATCGGGGCCGATGGGCTGGTTTCATCAGTTTCGCCTTCGATGTCTTGGGACGAAAGAATACCGCCTACAGGCCCAAAAATCAACCAGACCGGCTCATTTAGGGCCTGTTTTCGGCACCTCGGTTTCGCTCTACGGGCATTACACGAAACCGGAAAAGCGAACCCGCCAAAAGGCGAAACCGTGAGAACGGCCTTGTGGTGAGGGCAGTGTGGCGCGCGGCCAAGGCTTCAAATGCGATCCCCTGTCTTCGTTGCCTTCTCGTCTGCATGTCTTGCTTGTCTGCATGTCTTGCTTGTCCGCATGTCTTGAGCGAGGCGCCAAGCACGTCTCTAGAGGATGTTCTGTCAAAATGGCTCATTCATCTCCCTCATGGACGGTCATTTGCATTTCTCCCAGTCCGTTTGCGACATATTGTAGCAGG # Right flank : CAGGCTCCAACCTCCGGCGGTTTGCTTGTGAGCGGCGACCTGCTGGAATCAGGGGGCTGGTGCATGGAGATTCAAAGTATCGAATCCCGAGAATAGTCAATTTCCGAGAATGTAGGATGGCGCGTGTCCGTGTAAGTCCGCCCTACCCGCTTCTGTCGGACTCTGCTCTCACCCTTTCCCATGACGTGGACGGACCGTCCTCTCCGTACAGCTCCGCTGGTGTTCTTCGACCTGGAAACAACGGCGTTGCGCCCCGATCGCGGCGGGCGAATCTGCGAGATGGCCGTGGTCGATCAGAATGGAATTCGGTTCGACTGGTGCAGCGATGCGGCCTCGCCCCGGGATGACGCTGTTTCCCGTCAGCTGCCAACGCTTGTTGGTCATCTCGAATCAGGAATCGTGGTGGGACACAATCTGCAGTTCGATTTTCGCTTTCTTACCTACGAAGCTGAGCGTCTCGCGCTCAACGGGCTCGATCTCCGTTTCGTCGACACGTTGGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTAACTCCGCACACGCGGAGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.00,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA //